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The map label for this gene is visC [H]

Identifier: 34498575

GI number: 34498575

Start: 3406737

End: 3407888

Strand: Reverse

Name: visC [H]

Synonym: CV_3120

Alternate gene names: 34498575

Gene position: 3407888-3406737 (Counterclockwise)

Preceding gene: 34498576

Following gene: 34498574

Centisome position: 71.73

GC content: 70.92

Gene sequence:

>1152_bases
ATGCGTTACGACAAATATCACGCGGTCGTCGTCGGCGGCGGCCTGGTCGGGGCCAGCCTGGCCCTGGCGCTGGCGCGCGC
CGGCAAGCGGGTGGCGCTGCTGGAGGCCGGCGAGCCCGCCGTTGATGGACTGGAGCAGGGCTGGGACGCGCGCGTCTACG
CGGTCAGCCCGGCCAACCGGCGTTTCCTGGATGGCATGGGCGCCTGGCCCGACATGGCGCGGATCGGCACCATCGCGTCG
ATGGACGTGCGCGGCGACGCCGGCGGGCGGATCTCGTTCTCGGCCCGCGACGCCGACGCCGACGCGCTGGCCTGGATCGT
CGAGAACCGCTGGCTGCTGGCCTCGCTGTGGGCGCAGCTGCGCGACGGCGGCGCGGAGCTGATCACCGGCGCCCGCGCCC
AGGCGCTGGCCACGACGCCTGGCGAAGCCCGGCTGAAGCTGGAGGATGGCCGCGAACTGGCGGCCGAGCTGCTGGTGGGG
GCCGACGGCGCCAACTCCTGGGTAAGAGGTCAGCTGGGCTTGCAGGCCAGCGTCAAACCTTATGGCCAGAGCGGCGTGGT
GGCCAATTTCTCCTGCGAGCAGCCGCATCAAGGCGTGGCGCGGCAATGGTTTTTCGGCGACAGCATCCTCGCCTGGCTGC
CGATGGCAGGGAACCGAATATCGATGGTCTGGTCCACTCCTGATCCGCAGTCGCTGCTGCAGCTGTCGAACGAGGAATTG
GCCGCGCGCGTGGCGGAGGCCGGCGGGCGCCAGCTGGGCGCGTTTGCGACCCTCACGCCGGCGGCGGCCTTCCCCTTGCG
GCTGATCCAGCCCGAGGCGGTGGTCAGCGAGCGGGTGGCGCTGATAGGCGACGCCGCCCACACCGTCCATCCGCTGGCCG
GGCAGGGCGTCAACCTGGGTTTCCAGGACGCGGCCCAACTGGCCGCGCTGCTGGGCGCCGCGCCCGATTGCGGCGACTGG
ATGCTGCTGCGCCGCTACCAGCGCCAGCGCCGCGAGGCGGTGGCCGCGATGCAACTCGGCTGCGATGGCTTGTACCGGTT
GTTCCATGCGAAACTGCCCGGTCTGCCATGGCTGCGCAATACCGGCCTGTCCCTGACCAACTGCCTGACCCCGTTGAAAC
GGCAGTTCGCCAGGCAGGCGATTGGATACTGA

Upstream 100 bases:

>100_bases
GAGCCGGCTGCGCGGCGTCGGCATGACGGCGCTGGACGCGCTGCCGTCCTTGCGGCGCAAATTCGCCGGCCACCTGGTGT
TCGGCGTGCGGGGATAAACG

Downstream 100 bases:

>100_bases
TATCCCAAAGGACCCCTGATCGATGAACAAGAGAATGAAAACGCTGGCCCTGTCCAGCGCGATGCTGATGTCGCTGGCCG
CCTGCTCCCAAGCCGCCGGC

Product: ubiquinone biosynthesis hydroxylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MRYDKYHAVVVGGGLVGASLALALARAGKRVALLEAGEPAVDGLEQGWDARVYAVSPANRRFLDGMGAWPDMARIGTIAS
MDVRGDAGGRISFSARDADADALAWIVENRWLLASLWAQLRDGGAELITGARAQALATTPGEARLKLEDGRELAAELLVG
ADGANSWVRGQLGLQASVKPYGQSGVVANFSCEQPHQGVARQWFFGDSILAWLPMAGNRISMVWSTPDPQSLLQLSNEEL
AARVAEAGGRQLGAFATLTPAAAFPLRLIQPEAVVSERVALIGDAAHTVHPLAGQGVNLGFQDAAQLAALLGAAPDCGDW
MLLRRYQRQRREAVAAMQLGCDGLYRLFHAKLPGLPWLRNTGLSLTNCLTPLKRQFARQAIGY

Sequences:

>Translated_383_residues
MRYDKYHAVVVGGGLVGASLALALARAGKRVALLEAGEPAVDGLEQGWDARVYAVSPANRRFLDGMGAWPDMARIGTIAS
MDVRGDAGGRISFSARDADADALAWIVENRWLLASLWAQLRDGGAELITGARAQALATTPGEARLKLEDGRELAAELLVG
ADGANSWVRGQLGLQASVKPYGQSGVVANFSCEQPHQGVARQWFFGDSILAWLPMAGNRISMVWSTPDPQSLLQLSNEEL
AARVAEAGGRQLGAFATLTPAAAFPLRLIQPEAVVSERVALIGDAAHTVHPLAGQGVNLGFQDAAQLAALLGAAPDCGDW
MLLRRYQRQRREAVAAMQLGCDGLYRLFHAKLPGLPWLRNTGLSLTNCLTPLKRQFARQAIGY
>Mature_383_residues
MRYDKYHAVVVGGGLVGASLALALARAGKRVALLEAGEPAVDGLEQGWDARVYAVSPANRRFLDGMGAWPDMARIGTIAS
MDVRGDAGGRISFSARDADADALAWIVENRWLLASLWAQLRDGGAELITGARAQALATTPGEARLKLEDGRELAAELLVG
ADGANSWVRGQLGLQASVKPYGQSGVVANFSCEQPHQGVARQWFFGDSILAWLPMAGNRISMVWSTPDPQSLLQLSNEEL
AARVAEAGGRQLGAFATLTPAAAFPLRLIQPEAVVSERVALIGDAAHTVHPLAGQGVNLGFQDAAQLAALLGAAPDCGDW
MLLRRYQRQRREAVAAMQLGCDGLYRLFHAKLPGLPWLRNTGLSLTNCLTPLKRQFARQAIGY

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=401, Percent_Identity=31.4214463840399, Blast_Score=145, Evalue=7e-35,
Organism=Homo sapiens, GI32967307, Length=326, Percent_Identity=32.5153374233129, Blast_Score=125, Evalue=7e-29,
Organism=Escherichia coli, GI1789273, Length=387, Percent_Identity=38.5012919896641, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI1786883, Length=382, Percent_Identity=34.8167539267016, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1789274, Length=388, Percent_Identity=33.5051546391753, Blast_Score=171, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI25146631, Length=425, Percent_Identity=29.4117647058824, Blast_Score=142, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6321694, Length=447, Percent_Identity=25.9507829977629, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI19920760, Length=424, Percent_Identity=32.311320754717, Blast_Score=161, Evalue=6e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40882; Mature: 40882

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYDKYHAVVVGGGLVGASLALALARAGKRVALLEAGEPAVDGLEQGWDARVYAVSPANR
CCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCEEEEECCCCC
RFLDGMGAWPDMARIGTIASMDVRGDAGGRISFSARDADADALAWIVENRWLLASLWAQL
HHHCCCCCCCCHHHHCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHH
RDGGAELITGARAQALATTPGEARLKLEDGRELAAELLVGADGANSWVRGQLGLQASVKP
HCCCHHHHCCCCHHEEECCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEECCCCEECCCC
YGQSGVVANFSCEQPHQGVARQWFFGDSILAWLPMAGNRISMVWSTPDPQSLLQLSNEEL
CCCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCCHHHHHHHCCHHH
AARVAEAGGRQLGAFATLTPAAAFPLRLIQPEAVVSERVALIGDAAHTVHPLAGQGVNLG
HHHHHHHCCCCCCCEEEECCHHHCCHHHCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCC
FQDAAQLAALLGAAPDCGDWMLLRRYQRQRREAVAAMQLGCDGLYRLFHAKLPGLPWLRN
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHC
TGLSLTNCLTPLKRQFARQAIGY
CCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRYDKYHAVVVGGGLVGASLALALARAGKRVALLEAGEPAVDGLEQGWDARVYAVSPANR
CCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCEEEEECCCCC
RFLDGMGAWPDMARIGTIASMDVRGDAGGRISFSARDADADALAWIVENRWLLASLWAQL
HHHCCCCCCCCHHHHCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHH
RDGGAELITGARAQALATTPGEARLKLEDGRELAAELLVGADGANSWVRGQLGLQASVKP
HCCCHHHHCCCCHHEEECCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEECCCCEECCCC
YGQSGVVANFSCEQPHQGVARQWFFGDSILAWLPMAGNRISMVWSTPDPQSLLQLSNEEL
CCCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCCHHHHHHHCCHHH
AARVAEAGGRQLGAFATLTPAAAFPLRLIQPEAVVSERVALIGDAAHTVHPLAGQGVNLG
HHHHHHHCCCCCCCEEEECCHHHCCHHHCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCC
FQDAAQLAALLGAAPDCGDWMLLRRYQRQRREAVAAMQLGCDGLYRLFHAKLPGLPWLRN
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHC
TGLSLTNCLTPLKRQFARQAIGY
CCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]