| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is glmU [C]
Identifier: 34498558
GI number: 34498558
Start: 3391237
End: 3391851
Strand: Reverse
Name: glmU [C]
Synonym: CV_3103
Alternate gene names: 34498558
Gene position: 3391851-3391237 (Counterclockwise)
Preceding gene: 34498559
Following gene: 34498548
Centisome position: 71.39
GC content: 67.8
Gene sequence:
>615_bases ATGCCGGAATTGCACCGCCTGCTGCACTCGGTGGCCCAGGTCTTGCCCTGGCTGGATAAGACGATGGCGCCGTGGCAATG GCTGGCAGACTTGTCCGCCCTGCTGGCTGCGCAAAGGCGCGGCGCTTTTCCGGATGACTGGATGGTCGATGGCGAGTCCA TGATCCACCGCAGCGCGGTGCTGGAGGAGGGCGCGATCCTGAAGGGGCCGATCTGGATCGGCCCAGGCTGCCGGGTGGCC GCCCATGCCTACTTGCGCGGCGGCGTAGTGCTGTGTCCCGGCGCGACAGTGGGGCCGGGGTGCGAAATCAAGACTTCCAT CGTCGGGCCGGGCAGCCGTCTTGCCCATTTCAATTTCGTCGGCGACTCTGTGCTGGGCGCCGACGTCAATCTGGAGGCCG GCGCCATCCTCGCCAATCATTGGAACGAGCGCGCCGACAAGGCTATCCGGCTGCATGTGGCCGGCGAAGTGCTGCTGCCG GGGCTGGATAAGCTGGGCGCGCTGCTGGGCGACGGCGTGAGAGTGGGCGCCAACGCGGTGTTGTCGCCGGGCACGGTGCT GGCGGCCGGAACCGTGGTGCCGCGGTTGGGGCTGGTGGAGCAGGATAGGCCATGA
Upstream 100 bases:
>100_bases AGACTGCCGTTCCCGCGAGGGAGCGGCAGTTTTGTTTTGGGCGGCTTGCCAGCCCGCGCCTGCGGGCGTTAAATCGGACT TTTGCCTACAGGAGAGTTCG
Downstream 100 bases:
>100_bases AAACGGACCGCCGCGGCCTAGCCGGGCGGTCCGTGTCGGGGGCGCGAGGGCAAGCTAGCGCGGGAAGGCGGAAACGCCCA GTTTGCCCAGCAGGTAGCCG
Product: bifuncional: UDP-N-acetylglucosamineglucose-1-phosphate thymidylyltransferase; glucosamine-1-phosphate
Products: NA
Alternate protein names: UDP-N-acetylglucosamine pyrophosphorylase; N-acetylglucosamine-1-phosphate uridyltransferase; Glucosamine-1-phosphate N-acetyltransferase [H]
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MPELHRLLHSVAQVLPWLDKTMAPWQWLADLSALLAAQRRGAFPDDWMVDGESMIHRSAVLEEGAILKGPIWIGPGCRVA AHAYLRGGVVLCPGATVGPGCEIKTSIVGPGSRLAHFNFVGDSVLGADVNLEAGAILANHWNERADKAIRLHVAGEVLLP GLDKLGALLGDGVRVGANAVLSPGTVLAAGTVVPRLGLVEQDRP
Sequences:
>Translated_204_residues MPELHRLLHSVAQVLPWLDKTMAPWQWLADLSALLAAQRRGAFPDDWMVDGESMIHRSAVLEEGAILKGPIWIGPGCRVA AHAYLRGGVVLCPGATVGPGCEIKTSIVGPGSRLAHFNFVGDSVLGADVNLEAGAILANHWNERADKAIRLHVAGEVLLP GLDKLGALLGDGVRVGANAVLSPGTVLAAGTVVPRLGLVEQDRP >Mature_203_residues PELHRLLHSVAQVLPWLDKTMAPWQWLADLSALLAAQRRGAFPDDWMVDGESMIHRSAVLEEGAILKGPIWIGPGCRVAA HAYLRGGVVLCPGATVGPGCEIKTSIVGPGSRLAHFNFVGDSVLGADVNLEAGAILANHWNERADKAIRLHVAGEVLLPG LDKLGALLGDGVRVGANAVLSPGTVLAAGTVVPRLGLVEQDRP
Specific function: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetyl-glucosamine (UDP- GlcNAc). Responsible for the acetylation of GlcN-1-P to GlcNAc-1- P, and for the uridyl transfer from UTP to GlcNAc-1-P, to produce UDP-GlcN
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790168, Length=125, Percent_Identity=32, Blast_Score=60, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 - InterPro: IPR011004 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.23; =2.3.1.157 [H]
Molecular weight: Translated: 21455; Mature: 21324
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELHRLLHSVAQVLPWLDKTMAPWQWLADLSALLAAQRRGAFPDDWMVDGESMIHRSAV CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHH LEEGAILKGPIWIGPGCRVAAHAYLRGGVVLCPGATVGPGCEIKTSIVGPGSRLAHFNFV HHCCCEEECCEEECCCCHHHHHHHHCCCEEECCCCCCCCCCEEEEEEECCCCCEEEEEEC GDSVLGADVNLEAGAILANHWNERADKAIRLHVAGEVLLPGLDKLGALLGDGVRVGANAV CCCEECCCCCCCCCCHHHHHHHHHHCCEEEEEECCCEECCCHHHHHHHHCCCEEECCCEE LSPGTVLAAGTVVPRLGLVEQDRP ECCCCEEEHHHHHHCCCCCCCCCC >Mature Secondary Structure PELHRLLHSVAQVLPWLDKTMAPWQWLADLSALLAAQRRGAFPDDWMVDGESMIHRSAV CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHH LEEGAILKGPIWIGPGCRVAAHAYLRGGVVLCPGATVGPGCEIKTSIVGPGSRLAHFNFV HHCCCEEECCEEECCCCHHHHHHHHCCCEEECCCCCCCCCCEEEEEEECCCCCEEEEEEC GDSVLGADVNLEAGAILANHWNERADKAIRLHVAGEVLLPGLDKLGALLGDGVRVGANAV CCCEECCCCCCCCCCHHHHHHHHHHCCEEEEEECCCEECCCHHHHHHHHCCCEEECCCEE LSPGTVLAAGTVVPRLGLVEQDRP ECCCCEEEHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA