| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34498529
Identifier: 34498529
GI number: 34498529
Start: 3351463
End: 3351900
Strand: Reverse
Name: 34498529
Synonym: CV_3074
Alternate gene names: NA
Gene position: 3351900-3351463 (Counterclockwise)
Preceding gene: 34498530
Following gene: 34498528
Centisome position: 70.55
GC content: 54.57
Gene sequence:
>438_bases ATGACATCTCCTCTGTCTTTGTGCTTGAGGATAATGGCAAACAGGCCCGGAACATTCCGGGCCTTTTTTTGTTATATGGT CGGCACAAAATGTCAGTTAACCTGGTATTTGTTCCATGCTACATTTCCATGTCATTTTTATGTCGGAATGCATGTGAACG CGGCGAAGAAGATACGGCAATTGCTGGATCAGAGCGAAGAGCCGGAGCAAGTGGAAGTGTTGTTGCAGATGGCGGCCGGT TTGCAGCTTGGCTTGCCGTTCGACCTGAGGCGCTTGTGCGGGATCGAGCAGCCTTATTTCGAATTGGGCATGGCTCTGCT TAAGGACTGGCACGCCGATCATCACATCGCCGCGCGCAGCAAGCTCTTGGAGTCGATTCTGGCCCGGGACCAGGGGCTGC AGCTTCGGCTGTGCCATCTGGGGTCCGCCGCGGGCTGA
Upstream 100 bases:
>100_bases GCCGCAGCAACCCGTTGGGAAATGGCCCTATGTATATTTTCTGAGCCAGTCCGATCTTGCGGCGCAGCAAAAGCTGGCCT ATAACGCAAGCGTCATCACG
Downstream 100 bases:
>100_bases CCTTGTTGTTAGAATGGCCGTCTTTGGATTCACGGAGACGATCATGCTGGCGGATGTGGAACTGGCCAAATCCTATCGAT TGTTGAACCATGGCCCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MTSPLSLCLRIMANRPGTFRAFFCYMVGTKCQLTWYLFHATFPCHFYVGMHVNAAKKIRQLLDQSEEPEQVEVLLQMAAG LQLGLPFDLRRLCGIEQPYFELGMALLKDWHADHHIAARSKLLESILARDQGLQLRLCHLGSAAG
Sequences:
>Translated_145_residues MTSPLSLCLRIMANRPGTFRAFFCYMVGTKCQLTWYLFHATFPCHFYVGMHVNAAKKIRQLLDQSEEPEQVEVLLQMAAG LQLGLPFDLRRLCGIEQPYFELGMALLKDWHADHHIAARSKLLESILARDQGLQLRLCHLGSAAG >Mature_144_residues TSPLSLCLRIMANRPGTFRAFFCYMVGTKCQLTWYLFHATFPCHFYVGMHVNAAKKIRQLLDQSEEPEQVEVLLQMAAGL QLGLPFDLRRLCGIEQPYFELGMALLKDWHADHHIAARSKLLESILARDQGLQLRLCHLGSAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16448; Mature: 16316
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPLSLCLRIMANRPGTFRAFFCYMVGTKCQLTWYLFHATFPCHFYVGMHVNAAKKIRQ CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHH LLDQSEEPEQVEVLLQMAAGLQLGLPFDLRRLCGIEQPYFELGMALLKDWHADHHIAARS HHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHH KLLESILARDQGLQLRLCHLGSAAG HHHHHHHCCCCCCEEEEECCCCCCC >Mature Secondary Structure TSPLSLCLRIMANRPGTFRAFFCYMVGTKCQLTWYLFHATFPCHFYVGMHVNAAKKIRQ CCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHH LLDQSEEPEQVEVLLQMAAGLQLGLPFDLRRLCGIEQPYFELGMALLKDWHADHHIAARS HHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHH KLLESILARDQGLQLRLCHLGSAAG HHHHHHHCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA