| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is cmk
Identifier: 34498502
GI number: 34498502
Start: 3324795
End: 3325463
Strand: Reverse
Name: cmk
Synonym: CV_3047
Alternate gene names: 34498502
Gene position: 3325463-3324795 (Counterclockwise)
Preceding gene: 34498506
Following gene: 34498501
Centisome position: 69.99
GC content: 66.22
Gene sequence:
>669_bases ATGACAGTTCCGGTGATTACCATCGACGGCCCGTCCGCTTCCGGCAAGGGCACGGTGGCGGCCCAGGTCGCCGCGCGCCT CGCCTTCCATTACCTCGACTCGGGCTCGCTGTACCGGCTGCTGGCGCTGCACGCGCGCCGCCGCGGCATCGCCTGGGACG ACGAGCCGGCGCTGGCCAGAGCCGCCGCCGCCTTGCCGGTGGAGTTCTCCGACGGCGCGGTGTGGCTCGAAGGCAACGAC GCCAGCCAGGATATCCGCGCCGAGGAAATCGGCATCGGCGCGTCCAAGGTGGGCGCGCTGCCGGCCGTGCGCGCCGCGCT ATTGCAGCGCCAGCGCGATTTTTGCGAAGCGCCGGGCCTGGTGACCGATGGCCGCGACATGGGTTCGGTGGTGTTTCCGG ACGCGACTTTGAAGATTTTTTTGACCGCCAGCGCGGAAGAAAGGGCGAGTCGCCGTCATAAGCAGTTGATCGGCAAGGGG GAATCTGCTAACCTCGCACAGATTATGCAGGACATTATCGATCGGGACGCGCGCGATGCCGCCCGGCCGGTAGCGCCGCT GCGCCAGGAGCCGGACGCCTTTTTGCTCGATACCACGGAGCTGACCATAGACCAGGCGGTCGACAAGGTCCTCGAGTGGT TTGAGGAAAAACAAGCTTCCGGCCATTGA
Upstream 100 bases:
>100_bases CCCGCTTCGGTTACAATGCCCGGTTTGACCGGCCCGTTCTTCCCGCGACGCGCGGCGGATCCGGCCGGGTCTCGGCAGAA TGCAACAGGATCAGATTTCG
Downstream 100 bases:
>100_bases TTTTTTGTACGGCCGTTTTTGCTGCAATGCGGAAACGGCCCTGTTTTCAACCCTAACCCCGCAAGCCGCAAGGCCTGCAA CCGAGAGTACGCTTGATGAC
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MTVPVITIDGPSASGKGTVAAQVAARLAFHYLDSGSLYRLLALHARRRGIAWDDEPALARAAAALPVEFSDGAVWLEGND ASQDIRAEEIGIGASKVGALPAVRAALLQRQRDFCEAPGLVTDGRDMGSVVFPDATLKIFLTASAEERASRRHKQLIGKG ESANLAQIMQDIIDRDARDAARPVAPLRQEPDAFLLDTTELTIDQAVDKVLEWFEEKQASGH
Sequences:
>Translated_222_residues MTVPVITIDGPSASGKGTVAAQVAARLAFHYLDSGSLYRLLALHARRRGIAWDDEPALARAAAALPVEFSDGAVWLEGND ASQDIRAEEIGIGASKVGALPAVRAALLQRQRDFCEAPGLVTDGRDMGSVVFPDATLKIFLTASAEERASRRHKQLIGKG ESANLAQIMQDIIDRDARDAARPVAPLRQEPDAFLLDTTELTIDQAVDKVLEWFEEKQASGH >Mature_221_residues TVPVITIDGPSASGKGTVAAQVAARLAFHYLDSGSLYRLLALHARRRGIAWDDEPALARAAAALPVEFSDGAVWLEGNDA SQDIRAEEIGIGASKVGALPAVRAALLQRQRDFCEAPGLVTDGRDMGSVVFPDATLKIFLTASAEERASRRHKQLIGKGE SANLAQIMQDIIDRDARDAARPVAPLRQEPDAFLLDTTELTIDQAVDKVLEWFEEKQASGH
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1787139, Length=220, Percent_Identity=51.3636363636364, Blast_Score=201, Evalue=2e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KCY_CHRVO (Q7NTK7)
Other databases:
- EMBL: AE016825 - RefSeq: NP_902717.1 - ProteinModelPortal: Q7NTK7 - SMR: Q7NTK7 - GeneID: 2547284 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_3047 - NMPDR: fig|243365.1.peg.3047 - HOGENOM: HBG354377 - OMA: DIGTVIC - PhylomeDB: Q7NTK7 - ProtClustDB: CLSK2485550 - BioCyc: CVIO243365:CV_3047-MONOMER - BRENDA: 2.7.4.14 - GO: GO:0005737 - HAMAP: MF_00238 - InterPro: IPR003136 - InterPro: IPR011994 - PANTHER: PTHR21299:SF2 - TIGRFAMs: TIGR00017
Pfam domain/function: PF02224 Cytidylate_kin
EC number: =2.7.4.14
Molecular weight: Translated: 23895; Mature: 23764
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPVITIDGPSASGKGTVAAQVAARLAFHYLDSGSLYRLLALHARRRGIAWDDEPALAR CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHH AAAALPVEFSDGAVWLEGNDASQDIRAEEIGIGASKVGALPAVRAALLQRQRDFCEAPGL HHHHCCEEECCCEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC VTDGRDMGSVVFPDATLKIFLTASAEERASRRHKQLIGKGESANLAQIMQDIIDRDARDA EECCCCCCCEECCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHH ARPVAPLRQEPDAFLLDTTELTIDQAVDKVLEWFEEKQASGH HCCCCCHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVPVITIDGPSASGKGTVAAQVAARLAFHYLDSGSLYRLLALHARRRGIAWDDEPALAR CEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHH AAAALPVEFSDGAVWLEGNDASQDIRAEEIGIGASKVGALPAVRAALLQRQRDFCEAPGL HHHHCCEEECCCEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC VTDGRDMGSVVFPDATLKIFLTASAEERASRRHKQLIGKGESANLAQIMQDIIDRDARDA EECCCCCCCEECCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHH ARPVAPLRQEPDAFLLDTTELTIDQAVDKVLEWFEEKQASGH HCCCCCHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782