| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498494
Identifier: 34498494
GI number: 34498494
Start: 3317334
End: 3317924
Strand: Reverse
Name: 34498494
Synonym: CV_3039
Alternate gene names: NA
Gene position: 3317924-3317334 (Counterclockwise)
Preceding gene: 34498495
Following gene: 34498493
Centisome position: 69.84
GC content: 68.36
Gene sequence:
>591_bases ATGACGAAGCTGACCGCGCAACAAGTGGAAGAGGTGCTGGCCTTCTGGTTCGACGCCAGCGACGATGGGGCCTTGAACCG GCCGCGCGAGGCCTGGTTCCGCCGCGACGACGCTTTCGACGCCGAAATCCGCCGCCGTTTCCTGCCGTTGTGGCAGGAGT TGGCGGCCGGAGAGCTGGCCATCGACGCCGGCGACGCCCGCGCGGCGCTGGCCTGGCTGATCGCGGCCGACCAGTTTCCG CGCAACCTGTTCCGCGGCGAGGCCCGCGCCTTCTCCAGCGACGTTCTGGCGAGGGAAGGCGCGCGTCTGGTCATCAGCCA AGGATTGGACCAGGCGCTGCCGCCGGTGGCGCGGGTGTTCGTCTACCTGCCGTTCGAACACAGCGAGGACATCGCCGACC AGCGACTGTCCTTGCGGCTGTTCCAGGCTTTGGACACGGCGCTGCCGGGCTCCAATTATTACGATTACGCGCAGCGGCAT GAACGGGTGATCGCCGAGTTCGGCCGCTTCCCGCACCGCAACGCGGCGCTGGGCCGAACCAGCACGCCGGCCGAGCTGTC CTATCTGGCCCAACCCGGCGCGGGTTTCTGA
Upstream 100 bases:
>100_bases CAATGCCGCCGCGGGCGTGGTGGTGGGAAAATTGGGCACCGCCGTGTGCTCGCAGCAGGAACTGTTTGCCTTGTAAGCCG GCGCGCCGGTAGGAGACGCG
Downstream 100 bases:
>100_bases ATTTCCATCCGGGCCCGAGGGCCCGAAGCAGAACAAGGATCTATACATGACTATCGTCGTCACCGGCGCCGCCGGCTTCA TCGGCTCCAATCTGGTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MTKLTAQQVEEVLAFWFDASDDGALNRPREAWFRRDDAFDAEIRRRFLPLWQELAAGELAIDAGDARAALAWLIAADQFP RNLFRGEARAFSSDVLAREGARLVISQGLDQALPPVARVFVYLPFEHSEDIADQRLSLRLFQALDTALPGSNYYDYAQRH ERVIAEFGRFPHRNAALGRTSTPAELSYLAQPGAGF
Sequences:
>Translated_196_residues MTKLTAQQVEEVLAFWFDASDDGALNRPREAWFRRDDAFDAEIRRRFLPLWQELAAGELAIDAGDARAALAWLIAADQFP RNLFRGEARAFSSDVLAREGARLVISQGLDQALPPVARVFVYLPFEHSEDIADQRLSLRLFQALDTALPGSNYYDYAQRH ERVIAEFGRFPHRNAALGRTSTPAELSYLAQPGAGF >Mature_195_residues TKLTAQQVEEVLAFWFDASDDGALNRPREAWFRRDDAFDAEIRRRFLPLWQELAAGELAIDAGDARAALAWLIAADQFPR NLFRGEARAFSSDVLAREGARLVISQGLDQALPPVARVFVYLPFEHSEDIADQRLSLRLFQALDTALPGSNYYDYAQRHE RVIAEFGRFPHRNAALGRTSTPAELSYLAQPGAGF
Specific function: Unknown
COG id: COG3803
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22041; Mature: 21910
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLTAQQVEEVLAFWFDASDDGALNRPREAWFRRDDAFDAEIRRRFLPLWQELAAGELA CCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEE IDAGDARAALAWLIAADQFPRNLFRGEARAFSSDVLAREGARLVISQGLDQALPPVARVF EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHCCHHHHHH VYLPFEHSEDIADQRLSLRLFQALDTALPGSNYYDYAQRHERVIAEFGRFPHRNAALGRT HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC STPAELSYLAQPGAGF CCCHHHHHHCCCCCCC >Mature Secondary Structure TKLTAQQVEEVLAFWFDASDDGALNRPREAWFRRDDAFDAEIRRRFLPLWQELAAGELA CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEE IDAGDARAALAWLIAADQFPRNLFRGEARAFSSDVLAREGARLVISQGLDQALPPVARVF EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHCCHHHHHH VYLPFEHSEDIADQRLSLRLFQALDTALPGSNYYDYAQRHERVIAEFGRFPHRNAALGRT HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC STPAELSYLAQPGAGF CCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA