| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498489
Identifier: 34498489
GI number: 34498489
Start: 3313405
End: 3314223
Strand: Reverse
Name: 34498489
Synonym: CV_3034
Alternate gene names: NA
Gene position: 3314223-3313405 (Counterclockwise)
Preceding gene: 34498493
Following gene: 34498488
Centisome position: 69.76
GC content: 44.2
Gene sequence:
>819_bases ATGTTGGGACCGCGTGGAGTAGGTAGCTCAATCGATGGTGGTGAACGGATGGAGTTAAATTTTAGAGAGGTGGTCAAGGC GATGTCTCCAAACATACCGAACATCAAATTGGAAGATTTGCCTTCACCATTCTTCAGGGGGGCAATTACGGAGAAGGGGA TGTTGCAGGAAAGTAGAACTTTCTTCCATGGCATGTCGTCGGAGGAGGCTGATGCATGGGGGCGGAGGGGGATGGATGCT GCATTGAGTATAATGTCTGATTTTTATAATGAGAGTAAGTCATCGATAGATGCTCATGAGGCTATTCAGCTAAATCTTTA TGATAAATCTAATCATTCTTGGTCTTTTTTAAGATTTAATCCTTTTAAGTGGGGGGGTGTGAGCTTGATTAGGCTAGGGA TTTTTATTATGTGTTTAAGCGTGGTTGGCTGTGCTTCTAAGCGGGAAGTGACATCTGATCGATTTAAAGGGGTGTCCGAG ACAGTTAGCTTGATGCTTGAGGAGGAGAGGGTTTTCAATGCAAGCCACTCTTTAGAAGGCATGGCAGCAAGTGATGCGGC AAAGTCCCTTGAGGGGGAGGGATTTTTTTGCCAGATCGAATATGCAAGGGTGCCAATCTCGCTTATTCCTCTGGCAATGG TAGATGTGCCTAATGTTTATTGTCGAAAATCAGAGCCGAAATTGAAAGATTACTGTCCAAATAAGATGGTTATTGTAAAA GTGGAGTGGCGGGATCCAAAGGTGCCTATGGATAAACTGTATAGGGATGCGCAGCTTAGTCCTGTCAAGGAAGTTAGATT TCATTGTCACTTGAAGTAG
Upstream 100 bases:
>100_bases CGCTATCCTACCAAGCTGCGGTGGAGAAGGATTTGTGCAACAGCGCCTTGCTGAAGCGAGAACGCGTGATGATGTTGATG AATTTTATCGTAGTCGTGAT
Downstream 100 bases:
>100_bases GATGGTAATTATTATCCTGGGATGGGCGGGCAGGTTTCAGTCTTGCTCGTATACTCGGCGGTTTACCATCGTCAGTTCAG CGGCTGATACTCGCCATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MLGPRGVGSSIDGGERMELNFREVVKAMSPNIPNIKLEDLPSPFFRGAITEKGMLQESRTFFHGMSSEEADAWGRRGMDA ALSIMSDFYNESKSSIDAHEAIQLNLYDKSNHSWSFLRFNPFKWGGVSLIRLGIFIMCLSVVGCASKREVTSDRFKGVSE TVSLMLEEERVFNASHSLEGMAASDAAKSLEGEGFFCQIEYARVPISLIPLAMVDVPNVYCRKSEPKLKDYCPNKMVIVK VEWRDPKVPMDKLYRDAQLSPVKEVRFHCHLK
Sequences:
>Translated_272_residues MLGPRGVGSSIDGGERMELNFREVVKAMSPNIPNIKLEDLPSPFFRGAITEKGMLQESRTFFHGMSSEEADAWGRRGMDA ALSIMSDFYNESKSSIDAHEAIQLNLYDKSNHSWSFLRFNPFKWGGVSLIRLGIFIMCLSVVGCASKREVTSDRFKGVSE TVSLMLEEERVFNASHSLEGMAASDAAKSLEGEGFFCQIEYARVPISLIPLAMVDVPNVYCRKSEPKLKDYCPNKMVIVK VEWRDPKVPMDKLYRDAQLSPVKEVRFHCHLK >Mature_272_residues MLGPRGVGSSIDGGERMELNFREVVKAMSPNIPNIKLEDLPSPFFRGAITEKGMLQESRTFFHGMSSEEADAWGRRGMDA ALSIMSDFYNESKSSIDAHEAIQLNLYDKSNHSWSFLRFNPFKWGGVSLIRLGIFIMCLSVVGCASKREVTSDRFKGVSE TVSLMLEEERVFNASHSLEGMAASDAAKSLEGEGFFCQIEYARVPISLIPLAMVDVPNVYCRKSEPKLKDYCPNKMVIVK VEWRDPKVPMDKLYRDAQLSPVKEVRFHCHLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30659; Mature: 30659
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGPRGVGSSIDGGERMELNFREVVKAMSPNIPNIKLEDLPSPFFRGAITEKGMLQESRT CCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCEEHHCCCCHHHHCCCCCCHHHHHHHH FFHGMSSEEADAWGRRGMDAALSIMSDFYNESKSSIDAHEAIQLNLYDKSNHSWSFLRFN HHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEC PFKWGGVSLIRLGIFIMCLSVVGCASKREVTSDRFKGVSETVSLMLEEERVFNASHSLEG CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC MAASDAAKSLEGEGFFCQIEYARVPISLIPLAMVDVPNVYCRKSEPKLKDYCPNKMVIVK CHHHHHHHHCCCCCEEEEEEECCCCHHHHCCHHHCCCCCEECCCCCCHHHHCCCCEEEEE VEWRDPKVPMDKLYRDAQLSPVKEVRFHCHLK EECCCCCCCHHHHHCCCCCCCHHHHHEEECCC >Mature Secondary Structure MLGPRGVGSSIDGGERMELNFREVVKAMSPNIPNIKLEDLPSPFFRGAITEKGMLQESRT CCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCEEHHCCCCHHHHCCCCCCHHHHHHHH FFHGMSSEEADAWGRRGMDAALSIMSDFYNESKSSIDAHEAIQLNLYDKSNHSWSFLRFN HHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEC PFKWGGVSLIRLGIFIMCLSVVGCASKREVTSDRFKGVSETVSLMLEEERVFNASHSLEG CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC MAASDAAKSLEGEGFFCQIEYARVPISLIPLAMVDVPNVYCRKSEPKLKDYCPNKMVIVK CHHHHHHHHCCCCCEEEEEEECCCCHHHHCCHHHCCCCCEECCCCCCHHHHCCCCEEEEE VEWRDPKVPMDKLYRDAQLSPVKEVRFHCHLK EECCCCCCCHHHHHCCCCCCCHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA