| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498463
Identifier: 34498463
GI number: 34498463
Start: 3283449
End: 3284312
Strand: Direct
Name: 34498463
Synonym: CV_3008
Alternate gene names: NA
Gene position: 3283449-3284312 (Clockwise)
Preceding gene: 34498462
Following gene: 34498467
Centisome position: 69.11
GC content: 64.58
Gene sequence:
>864_bases ATGACCACCCCCAAGTCCGCCAACGAAATCATCTGCGACAACATCCGCAAGCAGCTGGACCAGTTCCGCTGGCCGGAAGC GCAGCAAGCCAGCCTGATCGAACAGATCCTGGGATTGAGCACCTCCCAGGCATACCGCAAGCTGAACGGCAGTAGCCCCT GGCAGCTGGCCCAGGTGGAGCGCCTAGCCCAGTACTTCAACCTCCCGGCCTCCAGCCTGCTGGTCGACCACAGCCAGCAG GAAGGGCAGAGCCCGATGGACAACGAACTGCTGCCGGCCATCCTGCACCTGAACAACCAGAGCGGCGAGGCCCATTGCTG GATACAGCTGGGCGAACAGCTGGCCGACGACTCCTGCGCGCCGCTGTTCCTGGCCAAGCGCCTGCACGACTGTTGGCATG TGTTCCCCGGCACCCTGTTCGACGGCGAGGACGGCTACGAGGTCGGCTACCTGACCATACGCCCGCCCAAGCGCGCCAAC ACCAAGCGGCTGCTGGTGGCGGTCCTGGACGACAAGGACGCCGACCTGCTGTCGGCCATCCTGGTGCAGCAAGGCCTGTT CGCCCTGCCCTACCATCAGCCGCAGGCGCTGTTGCAGGCCTTGCAGCACGAGGAGTTCGACGCCTTCGTGCTGGACTGGG TGCTGGGCGAGCCCACCAGTTGCATGGAAGTGATCGAGACCATACGCAGCCACTCGTCCACGGTGCCCATCGTGGTGCTG ACCGGCTACGCGCTTGAGCATGAAAGCGAGCTGTCGCGCGCCTTGCAGACCCACGGCGTCTACTACATCGGCAAGCCGGC GCCCGGCTCCATCCTGGCGCTGCAGATCAAGAACATGGTCACCAACGCGCTGGAACATGCCTGA
Upstream 100 bases:
>100_bases AAAATTAGGAAAAATTGCCAGTATGAGCATTTTTTGCACACATGTCGGCCGCATGGATGCTAGGATCGCCAATATGAAAA TCATGTGACGGGACATCGCC
Downstream 100 bases:
>100_bases GCCTCGCTCAAGCCGATAACAAAACAGGCTCCGCACGGAGCCTGTTTTTTTGCCCTGCCGCCTTTGCGCTACAGCGGCAG CGCCGCCAGCGCGGCGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Response Regulator
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MTTPKSANEIICDNIRKQLDQFRWPEAQQASLIEQILGLSTSQAYRKLNGSSPWQLAQVERLAQYFNLPASSLLVDHSQQ EGQSPMDNELLPAILHLNNQSGEAHCWIQLGEQLADDSCAPLFLAKRLHDCWHVFPGTLFDGEDGYEVGYLTIRPPKRAN TKRLLVAVLDDKDADLLSAILVQQGLFALPYHQPQALLQALQHEEFDAFVLDWVLGEPTSCMEVIETIRSHSSTVPIVVL TGYALEHESELSRALQTHGVYYIGKPAPGSILALQIKNMVTNALEHA
Sequences:
>Translated_287_residues MTTPKSANEIICDNIRKQLDQFRWPEAQQASLIEQILGLSTSQAYRKLNGSSPWQLAQVERLAQYFNLPASSLLVDHSQQ EGQSPMDNELLPAILHLNNQSGEAHCWIQLGEQLADDSCAPLFLAKRLHDCWHVFPGTLFDGEDGYEVGYLTIRPPKRAN TKRLLVAVLDDKDADLLSAILVQQGLFALPYHQPQALLQALQHEEFDAFVLDWVLGEPTSCMEVIETIRSHSSTVPIVVL TGYALEHESELSRALQTHGVYYIGKPAPGSILALQIKNMVTNALEHA >Mature_286_residues TTPKSANEIICDNIRKQLDQFRWPEAQQASLIEQILGLSTSQAYRKLNGSSPWQLAQVERLAQYFNLPASSLLVDHSQQE GQSPMDNELLPAILHLNNQSGEAHCWIQLGEQLADDSCAPLFLAKRLHDCWHVFPGTLFDGEDGYEVGYLTIRPPKRANT KRLLVAVLDDKDADLLSAILVQQGLFALPYHQPQALLQALQHEEFDAFVLDWVLGEPTSCMEVIETIRSHSSTVPIVVLT GYALEHESELSRALQTHGVYYIGKPAPGSILALQIKNMVTNALEHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32001; Mature: 31870
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPKSANEIICDNIRKQLDQFRWPEAQQASLIEQILGLSTSQAYRKLNGSSPWQLAQVE CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHH RLAQYFNLPASSLLVDHSQQEGQSPMDNELLPAILHLNNQSGEAHCWIQLGEQLADDSCA HHHHHHCCCHHHHHHCCCHHCCCCCCCCHHHHHHHEECCCCCCEEHHHHHHHHHCCCCCH PLFLAKRLHDCWHVFPGTLFDGEDGYEVGYLTIRPPKRANTKRLLVAVLDDKDADLLSAI HHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHH LVQQGLFALPYHQPQALLQALQHEEFDAFVLDWVLGEPTSCMEVIETIRSHSSTVPIVVL HHHCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEE TGYALEHESELSRALQTHGVYYIGKPAPGSILALQIKNMVTNALEHA ECCHHHHHHHHHHHHHHCCEEEEECCCCCCEEEHHHHHHHHHHHHCC >Mature Secondary Structure TTPKSANEIICDNIRKQLDQFRWPEAQQASLIEQILGLSTSQAYRKLNGSSPWQLAQVE CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHH RLAQYFNLPASSLLVDHSQQEGQSPMDNELLPAILHLNNQSGEAHCWIQLGEQLADDSCA HHHHHHCCCHHHHHHCCCHHCCCCCCCCHHHHHHHEECCCCCCEEHHHHHHHHHCCCCCH PLFLAKRLHDCWHVFPGTLFDGEDGYEVGYLTIRPPKRANTKRLLVAVLDDKDADLLSAI HHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHH LVQQGLFALPYHQPQALLQALQHEEFDAFVLDWVLGEPTSCMEVIETIRSHSSTVPIVVL HHHCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEE TGYALEHESELSRALQTHGVYYIGKPAPGSILALQIKNMVTNALEHA ECCHHHHHHHHHHHHHHCCEEEEECCCCCCEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA