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The map label for this gene is fliP [H]

Identifier: 34498458

GI number: 34498458

Start: 3278104

End: 3278850

Strand: Direct

Name: fliP [H]

Synonym: CV_3003

Alternate gene names: 34498458

Gene position: 3278104-3278850 (Clockwise)

Preceding gene: 34498457

Following gene: 34498459

Centisome position: 69.0

GC content: 65.73

Gene sequence:

>747_bases
ATGAAACGCGCACTTCCCCTGCTGCCGCTCGCCGCCGCTGGCCTGCTCGCGGCCGCGCCAGCCTGGGCCGAGCCGCTGAA
GCTGCTGTCCGCCAACGCCGGCGGCTCATCCGTCGACTTCACGATCAAGACCCAGATCCTGATCCTGATGACGGCGCTGG
GCCTGCTGCCGGTGCTGGTGCTGATGATGACCAGCTTCACGCGCTTCGTCATCGTGCTGTCGCTGCTGCGCCAGGCGCTG
GGCCTGCAGCAGGGCCTGCCCAACCGCCTGATCACCGGCGTGGCGCTGATCCTGACGCTGCTGGTGATGCGCCCGGTGGG
ACTGCAGGTGTGGAACGAGGCGATGGTGCCCTTCGACCAGGACAAGATCACCATGCAGCAGGCGCTGGAGATCGCCGCCA
AACCGGTCAGCCGCTTCATGCTGGCCCAGACCGGCAAGACCGCGCTGGCCCAGGTGGCGCGCCTGTCCGGCGAGGAAAAC
GTCGCCCGCCCGGAAGACCACGCCTTCACCGTCAAGCTGGCGGCCTTCGTGCTGTCCGAGCTGAAAACCGCGTTCCAGAT
CGGCTGCATGCTGTTCATTCCCTTCCTGGTGATAGACCTGGTGGTGTCCAGCGTGCTGATGGCGATGGGCATGATGATGC
TGTCGCCGCTGGTGATCTCGTTGCCGCTGAAGCTGCTGCTGTTCGTGCTGGTGGACGGCTGGTCGCTGACCGTCAACACG
CTGGTCACGTCGATACAGGCCTATTAG

Upstream 100 bases:

>100_bases
ACGGCACCGTGATCGGCCGCGCCGAGGTGGTGGTGTCCGGCGACAATTACGGCCTGCGCGTGGTGGAACTCAACGACCTG
CAGCTGGACAGCCTGGCCTG

Downstream 100 bases:

>100_bases
GAGGGACGGAGCCATGCTGACGCCCGATATCGCCGTCGACATCGTCAACGACAGCCTGCGCGTGGTGGTGACGCTGGTGG
TGCTGCTGGTGCTGCCCAGC

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKRALPLLPLAAAGLLAAAPAWAEPLKLLSANAGGSSVDFTIKTQILILMTALGLLPVLVLMMTSFTRFVIVLSLLRQAL
GLQQGLPNRLITGVALILTLLVMRPVGLQVWNEAMVPFDQDKITMQQALEIAAKPVSRFMLAQTGKTALAQVARLSGEEN
VARPEDHAFTVKLAAFVLSELKTAFQIGCMLFIPFLVIDLVVSSVLMAMGMMMLSPLVISLPLKLLLFVLVDGWSLTVNT
LVTSIQAY

Sequences:

>Translated_248_residues
MKRALPLLPLAAAGLLAAAPAWAEPLKLLSANAGGSSVDFTIKTQILILMTALGLLPVLVLMMTSFTRFVIVLSLLRQAL
GLQQGLPNRLITGVALILTLLVMRPVGLQVWNEAMVPFDQDKITMQQALEIAAKPVSRFMLAQTGKTALAQVARLSGEEN
VARPEDHAFTVKLAAFVLSELKTAFQIGCMLFIPFLVIDLVVSSVLMAMGMMMLSPLVISLPLKLLLFVLVDGWSLTVNT
LVTSIQAY
>Mature_248_residues
MKRALPLLPLAAAGLLAAAPAWAEPLKLLSANAGGSSVDFTIKTQILILMTALGLLPVLVLMMTSFTRFVIVLSLLRQAL
GLQQGLPNRLITGVALILTLLVMRPVGLQVWNEAMVPFDQDKITMQQALEIAAKPVSRFMLAQTGKTALAQVARLSGEEN
VARPEDHAFTVKLAAFVLSELKTAFQIGCMLFIPFLVIDLVVSSVLMAMGMMMLSPLVISLPLKLLLFVLVDGWSLTVNT
LVTSIQAY

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=215, Percent_Identity=49.3023255813954, Blast_Score=201, Evalue=4e-53,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 26738; Mature: 26738

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCC
>Mature Secondary Structure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HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]