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The map label for this gene is fliD [H]

Identifier: 34498449

GI number: 34498449

Start: 3269746

End: 3271101

Strand: Reverse

Name: fliD [H]

Synonym: CV_2994

Alternate gene names: 34498449

Gene position: 3271101-3269746 (Counterclockwise)

Preceding gene: 34498450

Following gene: 34498448

Centisome position: 68.85

GC content: 63.64

Gene sequence:

>1356_bases
ATGGCGATCGACTTCAACGCGATGCCGCCCTCCACCTGGGCGGAAAACCTGGCGCGCAACCAGTTGAGCAAGTTGCAGAC
TCAGTTGGACACCCAGACCAAGAGCGCCAAGGCGCGCACCGACGCGCTGAGCCAGTTGCAGAAGGCGCTTCAGGACTACA
AGAGCAGTCTGGCCACGCTGACCGGCAAGAAGAGCCTGGTGGCGATGAACGCCGCCGCCACCCCGGACGGCATGGCCTCG
GTCACCGCCAAGGGCAACGCCGCCGCCGGCAATTACAGCGTGTTCGTCGAGCAGCTGGCCAGTTCCCAGCAGCTGCTGAT
GGGCGATCTGGCGGGCGCCACGGCCAAGGCCGGCGACAAGTTCACCGTCAAGCTGGCCGGCGGCGAGAGCTTCGACGTGG
CGCTGGACGGTTCCGACCGCGATAACGATGGCAAGCTTTCTCCGAGCGAGCTGGCGCTGGCAATCAACCGCGCCAGCGGC
AACGCCGGCAAGGTCAACGCGATGGTGCTGAACAACAACGGCGTCAGCCAACTGGTGCTGTCGGCCGGCAAGAGCGGCGA
AAAGAACACCATTTCCCTGGATTTGAGCGGCGTCGGCGATGCCGGCCTGAAGAGTGGCCTGTCCGCGCCCAAGGAATTGA
GCAAGGCGCAGGACGCCGTTGTCTGGCTGGGCGGCAAGACCAATGGCGTCAGGCTGCAGCAGGGCTCCAACACCTTCGAC
AACATCGAAGGCGTCAGCTTCACCGTCAACAAGGTCAGCAAGGATACCGATCCGCCGCTGCAGATTTCCGTCAGCCGCGG
CGACAGCGACACCACCGCCAACGTCCAGTCCTTCGTCGATGCGTACAACAAGGTCTACAAGGCGATTACCGACCTGTCGC
AACCGGGCAGCAATGGCAAGCCGGGCGCGCCCTTCGCCGACGACTCCAGCATCCGCGGCTTGCGGAGCCAGCTCAACGCC
ATCCTGCGCCAGCCCTTTGACGGCGTCACCCAGGGCCAGCTGGGCATCAAGGCGACGCGGGACGGCACGCTGGAGCTGGA
CAGCAAGAAGCTCGGCGAAACCTTGAAGGCTACGCCCGACGCGCTGGACCGCTTCTTCAACGGCGCGAGCCAGAACGGCG
CGCTGAAGCAGAGCGCCGACTACCTGGACAAGTGGCTGAACGGCAGCAACGGCATGCTCAAGCTGCGCCGCGACAGCGAG
GATCGCAACCAGAAAGATTTGGGCCGGCGGCAGGACGCGTTGCAGAAGACCTTCGATCAGACCTACAACCGCTACCTGGC
GCAATTCACCAAATTGCAGAGCATGCAGGATCAGATGACCCAGACCATGGGCATGCTCAATTCCAACTTCATCTGA

Upstream 100 bases:

>100_bases
AGGGGACGCGGCTAGTGGTGAATATTCACGTCGTTTCAGTCCGCGCGGGCGATGGTCGCCCTGTAATGGTACATACCGTT
AGCGGACGAAAGGAATACTG

Downstream 100 bases:

>100_bases
ATTTAAGAAAGCAGGATCGAGATCGTGGATTACGACGCCTATCGCAGCTACCACGCGGTCAATCTGGAAGCCCAGACCGG
CGCCGCCAGCCAGATCGAGC

Product: flagellar hook-associated protein

Products: NA

Alternate protein names: HAP2; Filament CAP protein [H]

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MAIDFNAMPPSTWAENLARNQLSKLQTQLDTQTKSAKARTDALSQLQKALQDYKSSLATLTGKKSLVAMNAAATPDGMAS
VTAKGNAAAGNYSVFVEQLASSQQLLMGDLAGATAKAGDKFTVKLAGGESFDVALDGSDRDNDGKLSPSELALAINRASG
NAGKVNAMVLNNNGVSQLVLSAGKSGEKNTISLDLSGVGDAGLKSGLSAPKELSKAQDAVVWLGGKTNGVRLQQGSNTFD
NIEGVSFTVNKVSKDTDPPLQISVSRGDSDTTANVQSFVDAYNKVYKAITDLSQPGSNGKPGAPFADDSSIRGLRSQLNA
ILRQPFDGVTQGQLGIKATRDGTLELDSKKLGETLKATPDALDRFFNGASQNGALKQSADYLDKWLNGSNGMLKLRRDSE
DRNQKDLGRRQDALQKTFDQTYNRYLAQFTKLQSMQDQMTQTMGMLNSNFI

Sequences:

>Translated_451_residues
MAIDFNAMPPSTWAENLARNQLSKLQTQLDTQTKSAKARTDALSQLQKALQDYKSSLATLTGKKSLVAMNAAATPDGMAS
VTAKGNAAAGNYSVFVEQLASSQQLLMGDLAGATAKAGDKFTVKLAGGESFDVALDGSDRDNDGKLSPSELALAINRASG
NAGKVNAMVLNNNGVSQLVLSAGKSGEKNTISLDLSGVGDAGLKSGLSAPKELSKAQDAVVWLGGKTNGVRLQQGSNTFD
NIEGVSFTVNKVSKDTDPPLQISVSRGDSDTTANVQSFVDAYNKVYKAITDLSQPGSNGKPGAPFADDSSIRGLRSQLNA
ILRQPFDGVTQGQLGIKATRDGTLELDSKKLGETLKATPDALDRFFNGASQNGALKQSADYLDKWLNGSNGMLKLRRDSE
DRNQKDLGRRQDALQKTFDQTYNRYLAQFTKLQSMQDQMTQTMGMLNSNFI
>Mature_450_residues
AIDFNAMPPSTWAENLARNQLSKLQTQLDTQTKSAKARTDALSQLQKALQDYKSSLATLTGKKSLVAMNAAATPDGMASV
TAKGNAAAGNYSVFVEQLASSQQLLMGDLAGATAKAGDKFTVKLAGGESFDVALDGSDRDNDGKLSPSELALAINRASGN
AGKVNAMVLNNNGVSQLVLSAGKSGEKNTISLDLSGVGDAGLKSGLSAPKELSKAQDAVVWLGGKTNGVRLQQGSNTFDN
IEGVSFTVNKVSKDTDPPLQISVSRGDSDTTANVQSFVDAYNKVYKAITDLSQPGSNGKPGAPFADDSSIRGLRSQLNAI
LRQPFDGVTQGQLGIKATRDGTLELDSKKLGETLKATPDALDRFFNGASQNGALKQSADYLDKWLNGSNGMLKLRRDSED
RNQKDLGRRQDALQKTFDQTYNRYLAQFTKLQSMQDQMTQTMGMLNSNFI

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=454, Percent_Identity=26.6519823788546, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 47943; Mature: 47812

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDFNAMPPSTWAENLARNQLSKLQTQLDTQTKSAKARTDALSQLQKALQDYKSSLATL
CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGKKSLVAMNAAATPDGMASVTAKGNAAAGNYSVFVEQLASSQQLLMGDLAGATAKAGDK
CCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCE
FTVKLAGGESFDVALDGSDRDNDGKLSPSELALAINRASGNAGKVNAMVLNNNGVSQLVL
EEEEEECCCEEEEEECCCCCCCCCCCCHHHEEEEEECCCCCCCEEEEEEECCCCHHHHHH
SAGKSGEKNTISLDLSGVGDAGLKSGLSAPKELSKAQDAVVWLGGKTNGVRLQQGSNTFD
HCCCCCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHCCEEEEECCCCCCEEEECCCCCCC
NIEGVSFTVNKVSKDTDPPLQISVSRGDSDTTANVQSFVDAYNKVYKAITDLSQPGSNGK
CCCCCEEEEEHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PGAPFADDSSIRGLRSQLNAILRQPFDGVTQGQLGIKATRDGTLELDSKKLGETLKATPD
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECHHHHHHHHHCCHH
ALDRFFNGASQNGALKQSADYLDKWLNGSNGMLKLRRDSEDRNQKDLGRRQDALQKTFDQ
HHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
TYNRYLAQFTKLQSMQDQMTQTMGMLNSNFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AIDFNAMPPSTWAENLARNQLSKLQTQLDTQTKSAKARTDALSQLQKALQDYKSSLATL
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGKKSLVAMNAAATPDGMASVTAKGNAAAGNYSVFVEQLASSQQLLMGDLAGATAKAGDK
CCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCE
FTVKLAGGESFDVALDGSDRDNDGKLSPSELALAINRASGNAGKVNAMVLNNNGVSQLVL
EEEEEECCCEEEEEECCCCCCCCCCCCHHHEEEEEECCCCCCCEEEEEEECCCCHHHHHH
SAGKSGEKNTISLDLSGVGDAGLKSGLSAPKELSKAQDAVVWLGGKTNGVRLQQGSNTFD
HCCCCCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHCCEEEEECCCCCCEEEECCCCCCC
NIEGVSFTVNKVSKDTDPPLQISVSRGDSDTTANVQSFVDAYNKVYKAITDLSQPGSNGK
CCCCCEEEEEHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PGAPFADDSSIRGLRSQLNAILRQPFDGVTQGQLGIKATRDGTLELDSKKLGETLKATPD
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECHHHHHHHHHCCHH
ALDRFFNGASQNGALKQSADYLDKWLNGSNGMLKLRRDSEDRNQKDLGRRQDALQKTFDQ
HHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
TYNRYLAQFTKLQSMQDQMTQTMGMLNSNFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]