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The map label for this gene is crtB [H]

Identifier: 34498434

GI number: 34498434

Start: 3256344

End: 3257156

Strand: Reverse

Name: crtB [H]

Synonym: CV_2979

Alternate gene names: 34498434

Gene position: 3257156-3256344 (Counterclockwise)

Preceding gene: 34498435

Following gene: 34498433

Centisome position: 68.56

GC content: 69.5

Gene sequence:

>813_bases
ATGTCGGTCGGCCACTACGAGAATTTCCCGGTAGGCTCGCTGCTGCTGCCGCGCAGGATGCGGCGCGCGGTGCACGCCAT
CTACCGTTTCGCCCGCTACGCGGACGACGTGGCCGACGAGGGCGACGCGGCGCCGGCCGAGCGCTTGGCCGAGCTGGACC
GCATAGAGGCGGACCTGGACCGCATCGCGGCCGGCGAGCCGACGCGAATCGCGCTGATGGCCCCGCTTGCGGCGGCCGTC
GCAGAGCATGCGTTGCCGCTGCAGCCTATGCGCGACTTGTTGTCCGCTTTCCGCCAGGATGTGGTCAAGACGCGCTACCA
GAGCTTTGGCGAGCTGGTCGACTACTGCCGCCGTTCCGCCAATCCGGTGGGCAGGCTGATGCTGGCGCTGTACGGCGAAA
CCGATCCGCGCAGCCTGGCGCAGGCGGACGGCATCTGCACCGCCTTGCAGCTGATCAATTTCTGGCAGGATGTGGCGCTG
GACTGGCGCAAGGGCCGGGTCTACCTGCCGCAGGAGGATCTGGCGCGCTTCGGCGTCGACGAGGCGCAGATCGCCGCCGG
CCGCTTCGACGCCAAGTGGCGCGCGTTGATGCTGTTCCAGGTGGAGCGGGCGCGCAAGATGCTGCAGGCCGGCGCGCCGC
TGGGCAAAACGTTGCGGGGCCGGCTGGGGCTGGAGTTGCGGCTGATCGTGATGGGCGGAGAGCGCATTCTGAGCAAGCTG
CACGCCGCGGACGGCGACGTGTTCACGCGGCGGCCGGTGCTGGGCGGCCGCGATTGGATCTACATGATGTGGCGGGCGTG
CCGGGCCAAGTGA

Upstream 100 bases:

>100_bases
GGCATGGTTCAGGACATCCGGGCATGGCATTGTCAGCGAGAAGGACGCTGTAACGGGGCGTCGGGTATAATCGGCGGCCC
GGATACCCAGGAGGACGCCG

Downstream 100 bases:

>100_bases
GCCGGCGCGGCGCCGAAAACGGAATGCAGCCGGTCCGGAGACGGATCGGCCGACAGTGGGGGAGAGGCGCGTGACGCCCG
ATCAGTATTGCGAAGACAAG

Product: phytoene synthase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSVGHYENFPVGSLLLPRRMRRAVHAIYRFARYADDVADEGDAAPAERLAELDRIEADLDRIAAGEPTRIALMAPLAAAV
AEHALPLQPMRDLLSAFRQDVVKTRYQSFGELVDYCRRSANPVGRLMLALYGETDPRSLAQADGICTALQLINFWQDVAL
DWRKGRVYLPQEDLARFGVDEAQIAAGRFDAKWRALMLFQVERARKMLQAGAPLGKTLRGRLGLELRLIVMGGERILSKL
HAADGDVFTRRPVLGGRDWIYMMWRACRAK

Sequences:

>Translated_270_residues
MSVGHYENFPVGSLLLPRRMRRAVHAIYRFARYADDVADEGDAAPAERLAELDRIEADLDRIAAGEPTRIALMAPLAAAV
AEHALPLQPMRDLLSAFRQDVVKTRYQSFGELVDYCRRSANPVGRLMLALYGETDPRSLAQADGICTALQLINFWQDVAL
DWRKGRVYLPQEDLARFGVDEAQIAAGRFDAKWRALMLFQVERARKMLQAGAPLGKTLRGRLGLELRLIVMGGERILSKL
HAADGDVFTRRPVLGGRDWIYMMWRACRAK
>Mature_269_residues
SVGHYENFPVGSLLLPRRMRRAVHAIYRFARYADDVADEGDAAPAERLAELDRIEADLDRIAAGEPTRIALMAPLAAAVA
EHALPLQPMRDLLSAFRQDVVKTRYQSFGELVDYCRRSANPVGRLMLALYGETDPRSLAQADGICTALQLINFWQDVALD
WRKGRVYLPQEDLARFGVDEAQIAAGRFDAKWRALMLFQVERARKMLQAGAPLGKTLRGRLGLELRLIVMGGERILSKLH
AADGDVFTRRPVLGGRDWIYMMWRACRAK

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 30394; Mature: 30262

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVGHYENFPVGSLLLPRRMRRAVHAIYRFARYADDVADEGDAAPAERLAELDRIEADLD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
RIAAGEPTRIALMAPLAAAVAEHALPLQPMRDLLSAFRQDVVKTRYQSFGELVDYCRRSA
HHCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NPVGRLMLALYGETDPRSLAQADGICTALQLINFWQDVALDWRKGRVYLPQEDLARFGVD
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCC
EAQIAAGRFDAKWRALMLFQVERARKMLQAGAPLGKTLRGRLGLELRLIVMGGERILSKL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCHHHHHHH
HAADGDVFTRRPVLGGRDWIYMMWRACRAK
HHCCCCCEECCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SVGHYENFPVGSLLLPRRMRRAVHAIYRFARYADDVADEGDAAPAERLAELDRIEADLD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
RIAAGEPTRIALMAPLAAAVAEHALPLQPMRDLLSAFRQDVVKTRYQSFGELVDYCRRSA
HHCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NPVGRLMLALYGETDPRSLAQADGICTALQLINFWQDVALDWRKGRVYLPQEDLARFGVD
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCC
EAQIAAGRFDAKWRALMLFQVERARKMLQAGAPLGKTLRGRLGLELRLIVMGGERILSKL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCHHHHHHH
HAADGDVFTRRPVLGGRDWIYMMWRACRAK
HHCCCCCEECCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA