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The map label for this gene is crtB [H]

Identifier: 34498433

GI number: 34498433

Start: 3255428

End: 3256288

Strand: Reverse

Name: crtB [H]

Synonym: CV_2978

Alternate gene names: 34498433

Gene position: 3256288-3255428 (Counterclockwise)

Preceding gene: 34498434

Following gene: 34498432

Centisome position: 68.54

GC content: 64.69

Gene sequence:

>861_bases
GTGGGGGAGAGGCGCGTGACGCCCGATCAGTATTGCGAAGACAAGGCCGCGGCCAGCGGCTCCAGTTTCTATTACAGCTT
CCGTTTCCTGCCGGAAGAACGGCGTCGGGCGATCACCGCGTTGTATGCGTTTTGCCGCGAGGTGGACGACGCGGTGGACG
AATGCCATGACCTGAACGTGGCCCAGGCCAAGCTGGCCTGGTGGCGCGGCCAGGTGCAGCGCGCCTATCGCGGCGAGGCC
GACCATCCGGTGATGCGCGCGCTGCTGCCGCATCTCGAAGCATTCCAGCTCCCGCAATCCGAACTGGAAGAGATTGTCGA
CGGCATGGAGATGGATCTCAGCATGGTCCGCTACCAGCGTTTCCAGGACCTGCTGCTGTACTGCCACCGGGTGGCGGGCG
TGGTGGGCAAGCTGGCGGCGCGCATTTTCGGCTACAGCGACGAGCGCACGCTGGAGTACGCGCACGAGCTGGGCATCGCC
TTCCAACTGACCAACATCATCCGCGACGTCGGCGAAGACGCGCGTCGCGACCGCATCTACCTGCCGATGGAAGAGCTGCA
GCGTTTCAACTGCCCGGCGATGGACATCCTCCACTACGAGGAGAGCGAGGCTTTCAAGGCCTTGATGGCTTTCCAGATCG
AGCGCGCGCACCAGCATTACCGCAAAGCATGGGAACTGCTGCCGGCGGCCGACCGCAAGTCGCAGCGACCGGGCCTGTTG
ATGGCGGCGATCTACCGCGCCACGCTGGAAGAGATCAGCCTGGACGGCCCGGCCAAGGTGCTGAACCAGCGCCTGTCGCT
GACCCCGGTGCGCAAGCTGTGGCTGGCCTGGAAAACCTGGACCTTCGGCTACAAGCCGTGA

Upstream 100 bases:

>100_bases
CGCGATTGGATCTACATGATGTGGCGGGCGTGCCGGGCCAAGTGAGCCGGCGCGGCGCCGAAAACGGAATGCAGCCGGTC
CGGAGACGGATCGGCCGACA

Downstream 100 bases:

>100_bases
AGCCCAGGGTGGCGGTGGTGGGCGCCGGCTGGGCCGGGCTCGCCGCGGCGGTGGAACTGGCCGGCCATGCCGATGTCACC
GTCTATGAGGCCGGTCGCGA

Product: geranylgeranyl-diphosphate geranylgeranyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MGERRVTPDQYCEDKAAASGSSFYYSFRFLPEERRRAITALYAFCREVDDAVDECHDLNVAQAKLAWWRGQVQRAYRGEA
DHPVMRALLPHLEAFQLPQSELEEIVDGMEMDLSMVRYQRFQDLLLYCHRVAGVVGKLAARIFGYSDERTLEYAHELGIA
FQLTNIIRDVGEDARRDRIYLPMEELQRFNCPAMDILHYEESEAFKALMAFQIERAHQHYRKAWELLPAADRKSQRPGLL
MAAIYRATLEEISLDGPAKVLNQRLSLTPVRKLWLAWKTWTFGYKP

Sequences:

>Translated_286_residues
MGERRVTPDQYCEDKAAASGSSFYYSFRFLPEERRRAITALYAFCREVDDAVDECHDLNVAQAKLAWWRGQVQRAYRGEA
DHPVMRALLPHLEAFQLPQSELEEIVDGMEMDLSMVRYQRFQDLLLYCHRVAGVVGKLAARIFGYSDERTLEYAHELGIA
FQLTNIIRDVGEDARRDRIYLPMEELQRFNCPAMDILHYEESEAFKALMAFQIERAHQHYRKAWELLPAADRKSQRPGLL
MAAIYRATLEEISLDGPAKVLNQRLSLTPVRKLWLAWKTWTFGYKP
>Mature_285_residues
GERRVTPDQYCEDKAAASGSSFYYSFRFLPEERRRAITALYAFCREVDDAVDECHDLNVAQAKLAWWRGQVQRAYRGEAD
HPVMRALLPHLEAFQLPQSELEEIVDGMEMDLSMVRYQRFQDLLLYCHRVAGVVGKLAARIFGYSDERTLEYAHELGIAF
QLTNIIRDVGEDARRDRIYLPMEELQRFNCPAMDILHYEESEAFKALMAFQIERAHQHYRKAWELLPAADRKSQRPGLLM
AAIYRATLEEISLDGPAKVLNQRLSLTPVRKLWLAWKTWTFGYKP

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 33343; Mature: 33211

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGERRVTPDQYCEDKAAASGSSFYYSFRFLPEERRRAITALYAFCREVDDAVDECHDLNV
CCCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
AQAKLAWWRGQVQRAYRGEADHPVMRALLPHLEAFQLPQSELEEIVDGMEMDLSMVRYQR
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH
FQDLLLYCHRVAGVVGKLAARIFGYSDERTLEYAHELGIAFQLTNIIRDVGEDARRDRIY
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
LPMEELQRFNCPAMDILHYEESEAFKALMAFQIERAHQHYRKAWELLPAADRKSQRPGLL
CCHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
MAAIYRATLEEISLDGPAKVLNQRLSLTPVRKLWLAWKTWTFGYKP
HHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GERRVTPDQYCEDKAAASGSSFYYSFRFLPEERRRAITALYAFCREVDDAVDECHDLNV
CCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
AQAKLAWWRGQVQRAYRGEADHPVMRALLPHLEAFQLPQSELEEIVDGMEMDLSMVRYQR
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH
FQDLLLYCHRVAGVVGKLAARIFGYSDERTLEYAHELGIAFQLTNIIRDVGEDARRDRIY
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
LPMEELQRFNCPAMDILHYEESEAFKALMAFQIERAHQHYRKAWELLPAADRKSQRPGLL
CCHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
MAAIYRATLEEISLDGPAKVLNQRLSLTPVRKLWLAWKTWTFGYKP
HHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA