| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498425
Identifier: 34498425
GI number: 34498425
Start: 3249224
End: 3249577
Strand: Direct
Name: 34498425
Synonym: CV_2970
Alternate gene names: NA
Gene position: 3249224-3249577 (Clockwise)
Preceding gene: 34498423
Following gene: 34498456
Centisome position: 68.39
GC content: 66.1
Gene sequence:
>354_bases ATGAATGCCATGCTGGTTGGAGCCGACACCCTGGGCAACATCCCCGACGTGCTGCAGAACTACGGCATCACCATCCACCG CCACCTGAGCGGCCGCAACAGCTCGCACCAGCGCAAGGTGGACCGCCTGCCGGCGGGAACCGACCTGTTGATCCTGTTCA CCGACTTCCTCGGCCACAACGTGATGCGCCATTTCCGCGAGCTGGCGGCGGAGCAGCAGATCCGCTTCATCGCCTGTCGG CGTTCGGTCTGCGCGCTCAAGCAATCGCTGACCGGCGCCGGCATGTGCGAGCAGCCTTGCGCCGCCTGCCCGCAACGCAG CGGCGGCGACAAGCCCGTCAAGCGCAAACGTTGA
Upstream 100 bases:
>100_bases GCGCAGCCAAGCGGGGGAAGAAAAAAACCTTGAAAAACACGATTGACTCTGCAAATGATAATTATTATCATTTTCAAAAA CTCACACAGGAGCAAGCCCG
Downstream 100 bases:
>100_bases AGCGCCTGTTTCGGCAAGCTTTTCTCTAGCCTTACCTTTGCAATTTCACGAGCCGGCTCCCGCCGGCTCCTTTTTTGCCC GCCGCGCGCAGTCGTCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MNAMLVGADTLGNIPDVLQNYGITIHRHLSGRNSSHQRKVDRLPAGTDLLILFTDFLGHNVMRHFRELAAEQQIRFIACR RSVCALKQSLTGAGMCEQPCAACPQRSGGDKPVKRKR
Sequences:
>Translated_117_residues MNAMLVGADTLGNIPDVLQNYGITIHRHLSGRNSSHQRKVDRLPAGTDLLILFTDFLGHNVMRHFRELAAEQQIRFIACR RSVCALKQSLTGAGMCEQPCAACPQRSGGDKPVKRKR >Mature_117_residues MNAMLVGADTLGNIPDVLQNYGITIHRHLSGRNSSHQRKVDRLPAGTDLLILFTDFLGHNVMRHFRELAAEQQIRFIACR RSVCALKQSLTGAGMCEQPCAACPQRSGGDKPVKRKR
Specific function: Unknown
COG id: COG4378
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12983; Mature: 12983
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAMLVGADTLGNIPDVLQNYGITIHRHLSGRNSSHQRKVDRLPAGTDLLILFTDFLGHN CCCEEECCHHCCCCHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH VMRHFRELAAEQQIRFIACRRSVCALKQSLTGAGMCEQPCAACPQRSGGDKPVKRKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNAMLVGADTLGNIPDVLQNYGITIHRHLSGRNSSHQRKVDRLPAGTDLLILFTDFLGHN CCCEEECCHHCCCCHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH VMRHFRELAAEQQIRFIACRRSVCALKQSLTGAGMCEQPCAACPQRSGGDKPVKRKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA