| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is yedL [C]
Identifier: 34498406
GI number: 34498406
Start: 3228997
End: 3229497
Strand: Reverse
Name: yedL [C]
Synonym: CV_2951
Alternate gene names: 34498406
Gene position: 3229497-3228997 (Counterclockwise)
Preceding gene: 34498407
Following gene: 34498403
Centisome position: 67.97
GC content: 66.47
Gene sequence:
>501_bases ATGCAAACGCAGGATAGGCCGATCGCGGCCCCGCCGCGGCCGGTCTCCGGCCTGTCGATCCGGCTGGAGAGACCGGACCA GCCTGAGGTGATGGCTTTGATCGACGAGCTGGACGCCTACCAGAAACCCTTGTATCCGCCGGAGTGCCATTACGGGGTGG ATGTGTCGGCGTTGTTGAAGCCGGATGTGGCTTTCGCCGTGATTCGAGGAGAGGAGGGCGCGGCGCTGGGGTGCGGCGCG GTGTGCTGCGCAGCGGAATATGGCGAGCTGAAGCGGGTATTCGTCAAGCCGGAGAGCCGGGGCATGGGGGCGGCGCGCGC GCTGCTGTCCTTTCTGGAAGAGCAGGCGCGCGCCAGGGGCTGCGAGACGATGATGCTGGAAACCGGCATCCACCAGCACG AGGCGATTCGGCTATACCAGCGCGCCGGCTACGATTTCTGCCCGCCGTTCGGCGACTACCCGGACGACCCGCACAGCGTC TTCATGCGCAAGGCGCTCTGA
Upstream 100 bases:
>100_bases TTTTTGCGGGCGGGTTTCCGCGGCGACGCCAAGCGCGGCTTCGTCAAATACCGGCGTGATATGGGCGGCGATGGACATCA ATGAACCGAGGAAAGCAGAG
Downstream 100 bases:
>100_bases GTCACGGCGCCTTGCCTAGATGCGCGGCCAGCTGGCGCGCGCTCTGGCGGCACCACTCGTCGATCAGCGGCTTGACCAGC TCCAGCGTCATCGGCTGTTC
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MQTQDRPIAAPPRPVSGLSIRLERPDQPEVMALIDELDAYQKPLYPPECHYGVDVSALLKPDVAFAVIRGEEGAALGCGA VCCAAEYGELKRVFVKPESRGMGAARALLSFLEEQARARGCETMMLETGIHQHEAIRLYQRAGYDFCPPFGDYPDDPHSV FMRKAL
Sequences:
>Translated_166_residues MQTQDRPIAAPPRPVSGLSIRLERPDQPEVMALIDELDAYQKPLYPPECHYGVDVSALLKPDVAFAVIRGEEGAALGCGA VCCAAEYGELKRVFVKPESRGMGAARALLSFLEEQARARGCETMMLETGIHQHEAIRLYQRAGYDFCPPFGDYPDDPHSV FMRKAL >Mature_166_residues MQTQDRPIAAPPRPVSGLSIRLERPDQPEVMALIDELDAYQKPLYPPECHYGVDVSALLKPDVAFAVIRGEEGAALGCGA VCCAAEYGELKRVFVKPESRGMGAARALLSFLEEQARARGCETMMLETGIHQHEAIRLYQRAGYDFCPPFGDYPDDPHSV FMRKAL
Specific function: Participates in the tryptophan-dependent indole-3-acetic acid production, which is a phytohormone released by A.brasilense [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788242, Length=157, Percent_Identity=31.2101910828025, Blast_Score=64, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 18338; Mature: 18338
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTQDRPIAAPPRPVSGLSIRLERPDQPEVMALIDELDAYQKPLYPPECHYGVDVSALLK CCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHC PDVAFAVIRGEEGAALGCGAVCCAAEYGELKRVFVKPESRGMGAARALLSFLEEQARARG CCEEEEEEECCCCCEECCHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHCC CETMMLETGIHQHEAIRLYQRAGYDFCPPFGDYPDDPHSVFMRKAL CHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MQTQDRPIAAPPRPVSGLSIRLERPDQPEVMALIDELDAYQKPLYPPECHYGVDVSALLK CCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHC PDVAFAVIRGEEGAALGCGAVCCAAEYGELKRVFVKPESRGMGAARALLSFLEEQARARG CCEEEEEEECCCCCEECCHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHCC CETMMLETGIHQHEAIRLYQRAGYDFCPPFGDYPDDPHSVFMRKAL CHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1896020 [H]