| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498403
Identifier: 34498403
GI number: 34498403
Start: 3227031
End: 3227744
Strand: Reverse
Name: 34498403
Synonym: CV_2948
Alternate gene names: NA
Gene position: 3227744-3227031 (Counterclockwise)
Preceding gene: 34498406
Following gene: 34498398
Centisome position: 67.94
GC content: 66.39
Gene sequence:
>714_bases ATGAGGTCTCTGTTGGTTTGGCTGGTTTGGGCGTCGGCTGCTGTTGCCGGGCCGGCGCCCTTCCATTCCTATACGCTGGC GGTGGAGCCGTGGGGCGTGGCCGACAGCGACAGGGGCGTCGGCCCGGATTTCATCCGTTTTCTCGCCGCGTGGTCCGGCG TGCCGGTGCAAGCCGAAGCGAGGCCGTATCTGCGGGTGATAGACGGCATGCGCAGCGGTGTCAACGCGATCAATCTCGGC ATTCCCACCGAGGCGCGGGAACGTTATGGCATTGCCATCTGCGAAGTGGCGACGCTTAGCGTCTCGCTGGTCTATCTGAA GCGGGAAGGGCGGACGCATGCGTCGGCCGAGAGCTTTTCCGGGCTTGCTATCGGCGAGTTGAGAGGCAGCCACACGCTGG ACGCATTCGACCGGACGGTGCGGCACGACAAGGTGCTGCTGGGCGACATGGAGCAGGGGGCGAGGATGCTGGCGGCGGGC AGGCTGGATGCCACCGTCTGTGTGCGGCCCGGTTGCGGCAATGTGCTGGATGAGACGGGGCTGGCGGCGGATGCGCTGGG CGAGTGGAGGCTGGATGAGCAGCCGCTGCGCATTTATGTCGCCAAGTCCAGCCGGCTTGCCGGCGACGCGGATGCGATGC GCAGGCTGCGGCAGGCTTGCGAGTCGCCGGAAGGCCGGCTGGAAATGCGCCGTCTGCTGACGCCCTATCATTGA
Upstream 100 bases:
>100_bases GCTGATCTACACTGACGGAAGCGAGGCAAGTAGGACGGCCAGGGCATCCGGCATGATAAAAGGCGCCGCAAGCTCGCCGC CGTCAAAGCGGGAGGGAAAG
Downstream 100 bases:
>100_bases GCGCCGGAATCGGCGTGTCGCGGCGGGCGGGGACGTGCCGCCCGCCGCGCGTGGGCTCACACCGACAAGGACATCAGCAG GCTGGAGATGTCGTTGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MRSLLVWLVWASAAVAGPAPFHSYTLAVEPWGVADSDRGVGPDFIRFLAAWSGVPVQAEARPYLRVIDGMRSGVNAINLG IPTEARERYGIAICEVATLSVSLVYLKREGRTHASAESFSGLAIGELRGSHTLDAFDRTVRHDKVLLGDMEQGARMLAAG RLDATVCVRPGCGNVLDETGLAADALGEWRLDEQPLRIYVAKSSRLAGDADAMRRLRQACESPEGRLEMRRLLTPYH
Sequences:
>Translated_237_residues MRSLLVWLVWASAAVAGPAPFHSYTLAVEPWGVADSDRGVGPDFIRFLAAWSGVPVQAEARPYLRVIDGMRSGVNAINLG IPTEARERYGIAICEVATLSVSLVYLKREGRTHASAESFSGLAIGELRGSHTLDAFDRTVRHDKVLLGDMEQGARMLAAG RLDATVCVRPGCGNVLDETGLAADALGEWRLDEQPLRIYVAKSSRLAGDADAMRRLRQACESPEGRLEMRRLLTPYH >Mature_237_residues MRSLLVWLVWASAAVAGPAPFHSYTLAVEPWGVADSDRGVGPDFIRFLAAWSGVPVQAEARPYLRVIDGMRSGVNAINLG IPTEARERYGIAICEVATLSVSLVYLKREGRTHASAESFSGLAIGELRGSHTLDAFDRTVRHDKVLLGDMEQGARMLAAG RLDATVCVRPGCGNVLDETGLAADALGEWRLDEQPLRIYVAKSSRLAGDADAMRRLRQACESPEGRLEMRRLLTPYH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25829; Mature: 25829
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLLVWLVWASAAVAGPAPFHSYTLAVEPWGVADSDRGVGPDFIRFLAAWSGVPVQAEA CCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC RPYLRVIDGMRSGVNAINLGIPTEARERYGIAICEVATLSVSLVYLKREGRTHASAESFS CHHHHHHHHHHCCCCEEEECCCCHHHHHCCEEEEEEHHHEEEEEEEECCCCCCCCHHHCC GLAIGELRGSHTLDAFDRTVRHDKVLLGDMEQGARMLAAGRLDATVCVRPGCGNVLDETG CEEEECCCCCCCHHHHHHHHHHCCEEECCHHHHHHHHHCCCCCEEEEECCCCCCHHHHCC LAADALGEWRLDEQPLRIYVAKSSRLAGDADAMRRLRQACESPEGRLEMRRLLTPYH CCHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCC >Mature Secondary Structure MRSLLVWLVWASAAVAGPAPFHSYTLAVEPWGVADSDRGVGPDFIRFLAAWSGVPVQAEA CCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC RPYLRVIDGMRSGVNAINLGIPTEARERYGIAICEVATLSVSLVYLKREGRTHASAESFS CHHHHHHHHHHCCCCEEEECCCCHHHHHCCEEEEEEHHHEEEEEEEECCCCCCCCHHHCC GLAIGELRGSHTLDAFDRTVRHDKVLLGDMEQGARMLAAGRLDATVCVRPGCGNVLDETG CEEEECCCCCCCHHHHHHHHHHCCEEECCHHHHHHHHHCCCCCEEEEECCCCCCHHHHCC LAADALGEWRLDEQPLRIYVAKSSRLAGDADAMRRLRQACESPEGRLEMRRLLTPYH CCHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA