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The map label for this gene is chiD [H]

Identifier: 34498390

GI number: 34498390

Start: 3211716

End: 3213035

Strand: Reverse

Name: chiD [H]

Synonym: CV_2935

Alternate gene names: 34498390

Gene position: 3213035-3211716 (Counterclockwise)

Preceding gene: 34498392

Following gene: 34498381

Centisome position: 67.63

GC content: 67.35

Gene sequence:

>1320_bases
ATGCGCAGAACGACAGGCAGGGCGATTGCAATGGCTATGCTGCTGGCCCTGGGCCAGCACGCATGGGCGGCGGCTTGCCC
GGGCTGGGCCGAGGGAACGGCCTACAAGGTCGGCGACGTGGTCAGCTACAACAATGCCAACTATACCGCGCTGGTGGCGC
ACACGGCTTATGTCGGCGCCAACTGGAACCCGGCCGCCTCGCCGACGCTGTGGACGCCGGGCGGCAGCTGCGCCGGCGGC
GATCCCACTCCGCCGACGCCGCCGAATCCACCGACCCCGCCCAGCCCGCCGCCGGGCAATACCGTGCCTTTCGCCAAGCA
TGCGCTGGTAGGCTATTGGCACAATTTCGCCAATCCGAGCGGCAGCGCCTTCCCGCTGTCCCAGGTCAGCGCCGACTGGG
ATGTGATCGTGGTGGCCTTCGCCGACGACGCCGGCAACGGCAACGTCAGCTTCACGCTGGATCCGGCCGCGGGCAGCGCG
GCGCAGTTCATCCAGGACATCCGCGCGCAGCAAGCCAAGGGCAAGAAGGTGGTGCTGTCGCTGGGCGGCCAGAACGGTTC
GGTGACGCTGAACAACGCCACGCAGGTGCAGAACTTCGTCAACAGTCTGTACGGCATCCTCACCCAGTACGGCTTCGACG
GCATAGACCTGGATCTGGAGAGCGGCAGCGGCATCGTCGTCGGCGCGCCGGTGGTCAGTAATCTGGTCAGCGCGGTCAAG
CAGCTGAAGGCCAAGATCGGGCCCAATTTCTACCTGTCGATGGCGCCGGAGCATCCGTATGTGCAGGGCGGCTTCGTCGC
CTACGGCGGCAACTGGGGCGCCTATCTGCCCATCATCGACGGCCTGCGCGACGATTTGTCGGTGATCCATGTCCAGTACT
ACAACAACGGCGGACTATACACCCCTTATTCCACCGGCGTGCTGGCCGAGGGATCGGCCGACATGCTTGTCGGCGGCAGC
AAGATGCTGATCGAGGGCTTCCCGATCGCCAACGGCGCGTCGGGCAGCTTCAAGGGCCTGAGGCCGGACCAGGTGGCCTT
CGGCGTGCCGTCCGGCCGCAGTTCGGCCAATTCGGGCTTCGTCACCGCGGACACGGTGGCCAAGGCGCTGACCTGCCTGA
CCACGCTGCAAGGCTGCGGCTCGGTCAAGCCGGCGCAGGCTTATCCGGCCTTCCGCGGCGTGATGACGTGGTCGATCAAC
TGGGACCGCCGCGACGGCTACACCTTCTCCCGGCCGGTGGCCGCCAGCCTGCGCCAGCAGCCTGTCGCCGCGCAGGCGGG
CAAGAAAAAGGCCGCCCGCGCGACGCGGACGGCCTGGTGA

Upstream 100 bases:

>100_bases
CATTGATATTTATTTGACATTCAATGCTTGAAAGTTACTGCTGGCGACATACTCTTAAATACCAATCAAATACCAATTGA
ACGTCATGAGGAGAGGGCAG

Downstream 100 bases:

>100_bases
TGCGATGACTGGATGATCGTCGCTCAGGCGGCGGTCATCTGGTAGCCGCTGATCTGGGCGGCGGAAACCAGCATGTTCAG
GTACTCGTGCATGGCTTGGT

Product: chitinase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MRRTTGRAIAMAMLLALGQHAWAAACPGWAEGTAYKVGDVVSYNNANYTALVAHTAYVGANWNPAASPTLWTPGGSCAGG
DPTPPTPPNPPTPPSPPPGNTVPFAKHALVGYWHNFANPSGSAFPLSQVSADWDVIVVAFADDAGNGNVSFTLDPAAGSA
AQFIQDIRAQQAKGKKVVLSLGGQNGSVTLNNATQVQNFVNSLYGILTQYGFDGIDLDLESGSGIVVGAPVVSNLVSAVK
QLKAKIGPNFYLSMAPEHPYVQGGFVAYGGNWGAYLPIIDGLRDDLSVIHVQYYNNGGLYTPYSTGVLAEGSADMLVGGS
KMLIEGFPIANGASGSFKGLRPDQVAFGVPSGRSSANSGFVTADTVAKALTCLTTLQGCGSVKPAQAYPAFRGVMTWSIN
WDRRDGYTFSRPVAASLRQQPVAAQAGKKKAARATRTAW

Sequences:

>Translated_439_residues
MRRTTGRAIAMAMLLALGQHAWAAACPGWAEGTAYKVGDVVSYNNANYTALVAHTAYVGANWNPAASPTLWTPGGSCAGG
DPTPPTPPNPPTPPSPPPGNTVPFAKHALVGYWHNFANPSGSAFPLSQVSADWDVIVVAFADDAGNGNVSFTLDPAAGSA
AQFIQDIRAQQAKGKKVVLSLGGQNGSVTLNNATQVQNFVNSLYGILTQYGFDGIDLDLESGSGIVVGAPVVSNLVSAVK
QLKAKIGPNFYLSMAPEHPYVQGGFVAYGGNWGAYLPIIDGLRDDLSVIHVQYYNNGGLYTPYSTGVLAEGSADMLVGGS
KMLIEGFPIANGASGSFKGLRPDQVAFGVPSGRSSANSGFVTADTVAKALTCLTTLQGCGSVKPAQAYPAFRGVMTWSIN
WDRRDGYTFSRPVAASLRQQPVAAQAGKKKAARATRTAW
>Mature_439_residues
MRRTTGRAIAMAMLLALGQHAWAAACPGWAEGTAYKVGDVVSYNNANYTALVAHTAYVGANWNPAASPTLWTPGGSCAGG
DPTPPTPPNPPTPPSPPPGNTVPFAKHALVGYWHNFANPSGSAFPLSQVSADWDVIVVAFADDAGNGNVSFTLDPAAGSA
AQFIQDIRAQQAKGKKVVLSLGGQNGSVTLNNATQVQNFVNSLYGILTQYGFDGIDLDLESGSGIVVGAPVVSNLVSAVK
QLKAKIGPNFYLSMAPEHPYVQGGFVAYGGNWGAYLPIIDGLRDDLSVIHVQYYNNGGLYTPYSTGVLAEGSADMLVGGS
KMLIEGFPIANGASGSFKGLRPDQVAFGVPSGRSSANSGFVTADTVAKALTCLTTLQGCGSVKPAQAYPAFRGVMTWSIN
WDRRDGYTFSRPVAASLRQQPVAAQAGKKKAARATRTAW

Specific function: Unknown

COG id: COG3469

COG function: function code G; Chitinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 fibronectin type-III domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR001223
- InterPro:   IPR001579
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR015520 [H]

Pfam domain/function: PF02839 CBM_5_12; PF00041 fn3; PF00704 Glyco_hydro_18 [H]

EC number: =3.2.1.14 [H]

Molecular weight: Translated: 45719; Mature: 45719

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTTGRAIAMAMLLALGQHAWAAACPGWAEGTAYKVGDVVSYNNANYTALVAHTAYVGA
CCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCEEEECCCCEEEEEEEEEEECC
NWNPAASPTLWTPGGSCAGGDPTPPTPPNPPTPPSPPPGNTVPFAKHALVGYWHNFANPS
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GSAFPLSQVSADWDVIVVAFADDAGNGNVSFTLDPAAGSAAQFIQDIRAQQAKGKKVVLS
CCCCCHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEE
LGGQNGSVTLNNATQVQNFVNSLYGILTQYGFDGIDLDLESGSGIVVGAPVVSNLVSAVK
ECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEHHHHHHHHHHHH
QLKAKIGPNFYLSMAPEHPYVQGGFVAYGGNWGAYLPIIDGLRDDLSVIHVQYYNNGGLY
HHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCEEHHHHHCCCCCEEEEEEEEECCCCEE
TPYSTGVLAEGSADMLVGGSKMLIEGFPIANGASGSFKGLRPDQVAFGVPSGRSSANSGF
CCCCCCEEECCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
VTADTVAKALTCLTTLQGCGSVKPAQAYPAFRGVMTWSINWDRRDGYTFSRPVAASLRQQ
EEHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEEEEECCCCCCCEECCHHHHHHHCC
PVAAQAGKKKAARATRTAW
CCHHHHCCHHHHHHHCCCC
>Mature Secondary Structure
MRRTTGRAIAMAMLLALGQHAWAAACPGWAEGTAYKVGDVVSYNNANYTALVAHTAYVGA
CCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCEEEECCCCEEEEEEEEEEECC
NWNPAASPTLWTPGGSCAGGDPTPPTPPNPPTPPSPPPGNTVPFAKHALVGYWHNFANPS
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GSAFPLSQVSADWDVIVVAFADDAGNGNVSFTLDPAAGSAAQFIQDIRAQQAKGKKVVLS
CCCCCHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEE
LGGQNGSVTLNNATQVQNFVNSLYGILTQYGFDGIDLDLESGSGIVVGAPVVSNLVSAVK
ECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEHHHHHHHHHHHH
QLKAKIGPNFYLSMAPEHPYVQGGFVAYGGNWGAYLPIIDGLRDDLSVIHVQYYNNGGLY
HHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCEEHHHHHCCCCCEEEEEEEEECCCCEE
TPYSTGVLAEGSADMLVGGSKMLIEGFPIANGASGSFKGLRPDQVAFGVPSGRSSANSGF
CCCCCCEEECCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
VTADTVAKALTCLTTLQGCGSVKPAQAYPAFRGVMTWSINWDRRDGYTFSRPVAASLRQQ
EEHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEEEEECCCCCCCEECCHHHHHHHCC
PVAAQAGKKKAARATRTAW
CCHHHHCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1729234 [H]