| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34498365
Identifier: 34498365
GI number: 34498365
Start: 3187623
End: 3188321
Strand: Direct
Name: 34498365
Synonym: CV_2910
Alternate gene names: NA
Gene position: 3187623-3188321 (Clockwise)
Preceding gene: 34498361
Following gene: 34498370
Centisome position: 67.09
GC content: 46.78
Gene sequence:
>699_bases ATGGCACTTGGCGGAACAACGGAGATTAATACAGGAGAAAGCCTAACAATACACTGGGGCGTCCCGGATTACTGCGCCAG CGGCATAAAAGCCGACGTATGGATAGAAAAAATAGTAGACCACGATTGGGTGCTCGAATCCACATGGGTCAAAGGATATA AAATGACGGAATGCGCCGACCCGGAAACCGTGCATGGGAAAATGAACTACGCAGGCTCTCTGACTATAGCAGACCTACCA CGCAAACCCGGACTTTATCGAATAAAAGTCAAAACTTTCAGCCTATGCGGAGGAGGACAGATCAAAACCCCTTGTTATGT AAACCTGTTGCAACCTCCAAGCCTAGCCGCACCCAAGATACTGAAAACGAAAGGTATTTCGAAAAATGCAGCAGAGCAAT TGGAACTTAGCGTGCACTCGACACCGGACTTATTCATTACCATCGCCAACGGTGAAATAAAATCAGGGACGCCGGTACAG CTAGTCTTAACCAGCCCCGGCTCGCAGTGGGAATCTGAAATCCACGCCCTGAAAACCGAGCCCATGCCCGAATCAAATTC TTTGAAATTATCCATACCCAATGCCTGCCTGAGACAGCTTCAAGCAGAACGATGCATCCATATCAAGTATTTTATAAATT GCAACAATCCAGAACTATGGCAACAATCGCATAGCGCAAGCATTTTATTGAAACCATGA
Upstream 100 bases:
>100_bases GGCTTAAATAAGAATCGGCATACTCATTTTGATCGGATTTCGCGATATGCCAACAATCGACACTGGAATGCACCCTATCT GGACAAAGGATACTCGTGCC
Downstream 100 bases:
>100_bases AGGAATTCATCCAGGCCAGGCCACGGCGCAATTCGCTGGCAAAAATACCGCACGACCTCCAGCGCTCAATTCAGGCTCTA CAACTGGCTTGATTCAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MALGGTTEINTGESLTIHWGVPDYCASGIKADVWIEKIVDHDWVLESTWVKGYKMTECADPETVHGKMNYAGSLTIADLP RKPGLYRIKVKTFSLCGGGQIKTPCYVNLLQPPSLAAPKILKTKGISKNAAEQLELSVHSTPDLFITIANGEIKSGTPVQ LVLTSPGSQWESEIHALKTEPMPESNSLKLSIPNACLRQLQAERCIHIKYFINCNNPELWQQSHSASILLKP
Sequences:
>Translated_232_residues MALGGTTEINTGESLTIHWGVPDYCASGIKADVWIEKIVDHDWVLESTWVKGYKMTECADPETVHGKMNYAGSLTIADLP RKPGLYRIKVKTFSLCGGGQIKTPCYVNLLQPPSLAAPKILKTKGISKNAAEQLELSVHSTPDLFITIANGEIKSGTPVQ LVLTSPGSQWESEIHALKTEPMPESNSLKLSIPNACLRQLQAERCIHIKYFINCNNPELWQQSHSASILLKP >Mature_231_residues ALGGTTEINTGESLTIHWGVPDYCASGIKADVWIEKIVDHDWVLESTWVKGYKMTECADPETVHGKMNYAGSLTIADLPR KPGLYRIKVKTFSLCGGGQIKTPCYVNLLQPPSLAAPKILKTKGISKNAAEQLELSVHSTPDLFITIANGEIKSGTPVQL VLTSPGSQWESEIHALKTEPMPESNSLKLSIPNACLRQLQAERCIHIKYFINCNNPELWQQSHSASILLKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25493; Mature: 25361
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGGTTEINTGESLTIHWGVPDYCASGIKADVWIEKIVDHDWVLESTWVKGYKMTECAD CCCCCCCCCCCCCEEEEEECCHHHHHCCCCHHHHHHHHHCCCEEEEHHHCCCEEEECCCC PETVHGKMNYAGSLTIADLPRKPGLYRIKVKTFSLCGGGQIKTPCYVNLLQPPSLAAPKI CCEEEEEECCCEEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCE LKTKGISKNAAEQLELSVHSTPDLFITIANGEIKSGTPVQLVLTSPGSQWESEIHALKTE EECCCCCCCCCHHEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHEECC PMPESNSLKLSIPNACLRQLQAERCIHIKYFINCNNPELWQQSHSASILLKP CCCCCCCEEEECCHHHHHHHHHCCEEEEEEEEECCCHHHHHCCCCCEEEEEC >Mature Secondary Structure ALGGTTEINTGESLTIHWGVPDYCASGIKADVWIEKIVDHDWVLESTWVKGYKMTECAD CCCCCCCCCCCCEEEEEECCHHHHHCCCCHHHHHHHHHCCCEEEEHHHCCCEEEECCCC PETVHGKMNYAGSLTIADLPRKPGLYRIKVKTFSLCGGGQIKTPCYVNLLQPPSLAAPKI CCEEEEEECCCEEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCE LKTKGISKNAAEQLELSVHSTPDLFITIANGEIKSGTPVQLVLTSPGSQWESEIHALKTE EECCCCCCCCCHHEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHEECC PMPESNSLKLSIPNACLRQLQAERCIHIKYFINCNNPELWQQSHSASILLKP CCCCCCCEEEECCHHHHHHHHHCCEEEEEEEEECCCHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA