| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is rhlE1 [H]
Identifier: 34498347
GI number: 34498347
Start: 3168075
End: 3169394
Strand: Direct
Name: rhlE1 [H]
Synonym: CV_2892
Alternate gene names: 34498347
Gene position: 3168075-3169394 (Clockwise)
Preceding gene: 34498344
Following gene: 34498351
Centisome position: 66.68
GC content: 68.11
Gene sequence:
>1320_bases ATGACGTTCTCCGATCTGGGCATCGCCCCGACCATCCTGCGCGCGCTGCAAGCCGCCGGCTACGAAAACCCGACCGCGGT GCAGGCTGAAGCCGTGCCGGCGGCCATCGCCGGCCGCGACCTGCTGGTATCCGCCCAGACCGGCAGCGGCAAGACCGCGG CCTTCCTGCTGCCGGCGCTGACCAAGCTGTCCGAGCGCTCCACCGCCAAGGGCCAGGGCCCGCGCGTGCTGGTGCTGACG CCGACCCGCGAACTGGCCCAGCAGGTGGAGAAGAACGCGCTGGAATACGGCAAGGACCTGCGCTGGATGCGCACCGCCTG CCTGGTGGGCGGCTCCTCCTTCGGCTACCAGATCCGCGCGCTGTCGCGCCCGATCGACCTGATCGTGGCCACCCCGGGCC GCCTGATGGACCACATGCGCTCCGGCCGCATCGACTTCTCCCGCCTGGAAATGCTGGTGCTGGACGAAGCCGACCGCATG CTGGACATGGGCTTCATCGACGATATCGAAGCCATCGTCAAGGCCACCCCGGAAACCCGCCAGACCGTGCTGTTCTCCGC CACGCTGGACGGCATCGTCGGCCGCATGGCTGAAAAGATGACCCGCGATCCGCAGCGCATCGAGATCGCCCGCACCGAAA CCTCCGGCGGCACCATCGAAGAACACCTGCTGTACGCGGACGACCTGAACCACAAGCACCGTCTGCTGGACTACATCCTG AAAGAATCCGGCTTCGACCAGTGCGTGATCTTCTCCGCCACCAAGGCTTACTCGGAAGAACTGGCCGACAAGCTGTCCGA CCAGGGCTACTCCGCCGCCTGCCTGCACGGCGACATGCCGCAAAGCTGGCGCAACCGCACGCTGAACGACCTGCGCCGCG GCCGCATCAAGGTGCTGGTGGCCACCGACGTGGCCGCTCGCGGCATCGACGTGCCGACCATCACCCACGTGGTGAACTTC GACCTGCCGAAGCAGGCTGAAGACTACGTGCACCGCATCGGCCGCACCGGCCGCGCCGGCCGCGACGGCACCGCGATCAC CCTGGCGGAATCCAAGGAATTCCACAAGGTGCGCCGCATCGAGCAATACCTGAAGCGCCAGATCACCGAAGGCGTGATCG ACGGCCTGGAACCGACCCGTCGCCCGCCCAAGGGCCCGCGCCGCAACAACAACGGCAAGGGCGGCTACGGCGACCGCCGC CATGGCAGCGGCAACGGCCGCGGCGGCTACGGCAACAACCGTCGCGAAGGCGGCTACCAGGGCCAGCGCCGCGAAGGCGG CTATCAAGGCAACCGCGGTCCGCGCAGCAGCGCGCAGTAA
Upstream 100 bases:
>100_bases GGTTGGTGCCGATGAGTTGCGGCCTAGAAGGCGCCGCATAACCGCCACGAAACCTGGCTTAACGAGTGACGCCGGCAGCA AGCCGGCCTGAAAGGACATC
Downstream 100 bases:
>100_bases GGTTGATCTGAAAATGAAAAACGGCGGGACTTCCCGCCGTTTTTTTATTCTGCGCGCAGAAGCGCAGCCCATTACCGCTT GGCAGATGAATGGGACACTC
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MTFSDLGIAPTILRALQAAGYENPTAVQAEAVPAAIAGRDLLVSAQTGSGKTAAFLLPALTKLSERSTAKGQGPRVLVLT PTRELAQQVEKNALEYGKDLRWMRTACLVGGSSFGYQIRALSRPIDLIVATPGRLMDHMRSGRIDFSRLEMLVLDEADRM LDMGFIDDIEAIVKATPETRQTVLFSATLDGIVGRMAEKMTRDPQRIEIARTETSGGTIEEHLLYADDLNHKHRLLDYIL KESGFDQCVIFSATKAYSEELADKLSDQGYSAACLHGDMPQSWRNRTLNDLRRGRIKVLVATDVAARGIDVPTITHVVNF DLPKQAEDYVHRIGRTGRAGRDGTAITLAESKEFHKVRRIEQYLKRQITEGVIDGLEPTRRPPKGPRRNNNGKGGYGDRR HGSGNGRGGYGNNRREGGYQGQRREGGYQGNRGPRSSAQ
Sequences:
>Translated_439_residues MTFSDLGIAPTILRALQAAGYENPTAVQAEAVPAAIAGRDLLVSAQTGSGKTAAFLLPALTKLSERSTAKGQGPRVLVLT PTRELAQQVEKNALEYGKDLRWMRTACLVGGSSFGYQIRALSRPIDLIVATPGRLMDHMRSGRIDFSRLEMLVLDEADRM LDMGFIDDIEAIVKATPETRQTVLFSATLDGIVGRMAEKMTRDPQRIEIARTETSGGTIEEHLLYADDLNHKHRLLDYIL KESGFDQCVIFSATKAYSEELADKLSDQGYSAACLHGDMPQSWRNRTLNDLRRGRIKVLVATDVAARGIDVPTITHVVNF DLPKQAEDYVHRIGRTGRAGRDGTAITLAESKEFHKVRRIEQYLKRQITEGVIDGLEPTRRPPKGPRRNNNGKGGYGDRR HGSGNGRGGYGNNRREGGYQGQRREGGYQGNRGPRSSAQ >Mature_438_residues TFSDLGIAPTILRALQAAGYENPTAVQAEAVPAAIAGRDLLVSAQTGSGKTAAFLLPALTKLSERSTAKGQGPRVLVLTP TRELAQQVEKNALEYGKDLRWMRTACLVGGSSFGYQIRALSRPIDLIVATPGRLMDHMRSGRIDFSRLEMLVLDEADRML DMGFIDDIEAIVKATPETRQTVLFSATLDGIVGRMAEKMTRDPQRIEIARTETSGGTIEEHLLYADDLNHKHRLLDYILK ESGFDQCVIFSATKAYSEELADKLSDQGYSAACLHGDMPQSWRNRTLNDLRRGRIKVLVATDVAARGIDVPTITHVVNFD LPKQAEDYVHRIGRTGRAGRDGTAITLAESKEFHKVRRIEQYLKRQITEGVIDGLEPTRRPPKGPRRNNNGKGGYGDRRH GSGNGRGGYGNNRREGGYQGQRREGGYQGNRGPRSSAQ
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI148613856, Length=370, Percent_Identity=39.1891891891892, Blast_Score=268, Evalue=5e-72, Organism=Homo sapiens, GI38201710, Length=370, Percent_Identity=39.1891891891892, Blast_Score=268, Evalue=5e-72, Organism=Homo sapiens, GI4758138, Length=365, Percent_Identity=38.9041095890411, Blast_Score=265, Evalue=9e-71, Organism=Homo sapiens, GI45446747, Length=447, Percent_Identity=34.675615212528, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI45446743, Length=447, Percent_Identity=34.675615212528, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI222352149, Length=369, Percent_Identity=36.8563685636856, Blast_Score=255, Evalue=7e-68, Organism=Homo sapiens, GI41327771, Length=379, Percent_Identity=37.9947229551451, Blast_Score=251, Evalue=7e-67, Organism=Homo sapiens, GI169881239, Length=424, Percent_Identity=37.2641509433962, Blast_Score=251, Evalue=8e-67, Organism=Homo sapiens, GI13514809, Length=424, Percent_Identity=37.2641509433962, Blast_Score=251, Evalue=8e-67, Organism=Homo sapiens, GI20149629, Length=368, Percent_Identity=37.7717391304348, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI7661920, Length=369, Percent_Identity=37.1273712737127, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI301171467, Length=366, Percent_Identity=39.6174863387978, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI87196351, Length=366, Percent_Identity=39.6174863387978, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI301171475, Length=366, Percent_Identity=39.6174863387978, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI41327773, Length=353, Percent_Identity=39.6600566572238, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI13518015, Length=361, Percent_Identity=36.8421052631579, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI262231852, Length=361, Percent_Identity=36.8421052631579, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI216548263, Length=361, Percent_Identity=36.8421052631579, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI262118318, Length=361, Percent_Identity=36.8421052631579, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI50659095, Length=372, Percent_Identity=38.1720430107527, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI13129006, Length=372, Percent_Identity=38.1720430107527, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI55749865, Length=347, Percent_Identity=34.8703170028818, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI164664518, Length=366, Percent_Identity=34.1530054644809, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI31542656, Length=385, Percent_Identity=37.4025974025974, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI188035877, Length=350, Percent_Identity=35.4285714285714, Blast_Score=229, Evalue=6e-60, Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=35.6741573033708, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI51094101, Length=374, Percent_Identity=34.4919786096257, Blast_Score=219, Evalue=6e-57, Organism=Homo sapiens, GI164419743, Length=374, Percent_Identity=34.4919786096257, Blast_Score=218, Evalue=7e-57, Organism=Homo sapiens, GI224593278, Length=366, Percent_Identity=35.5191256830601, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI41327776, Length=368, Percent_Identity=34.7826086956522, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI13514831, Length=351, Percent_Identity=35.3276353276353, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=34.4086021505376, Blast_Score=202, Evalue=5e-52, Organism=Homo sapiens, GI83700235, Length=369, Percent_Identity=34.9593495934959, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI17505907, Length=415, Percent_Identity=33.4939759036145, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI6005743, Length=393, Percent_Identity=32.5699745547074, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI8922886, Length=393, Percent_Identity=32.824427480916, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI4758112, Length=350, Percent_Identity=32.8571428571429, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI18375623, Length=350, Percent_Identity=32.8571428571429, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI21040371, Length=350, Percent_Identity=31.4285714285714, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI62241022, Length=375, Percent_Identity=32.8, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI164419732, Length=369, Percent_Identity=32.7913279132791, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI256223453, Length=369, Percent_Identity=29.810298102981, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI38569505, Length=350, Percent_Identity=32.5714285714286, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI38569503, Length=346, Percent_Identity=32.6589595375723, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI38327634, Length=364, Percent_Identity=32.967032967033, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI41327779, Length=357, Percent_Identity=33.0532212885154, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI62241024, Length=354, Percent_Identity=33.0508474576271, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI9506931, Length=402, Percent_Identity=29.3532338308458, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=30.7692307692308, Blast_Score=155, Evalue=8e-38, Organism=Homo sapiens, GI256773275, Length=412, Percent_Identity=32.2815533980583, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI20336298, Length=354, Percent_Identity=32.7683615819209, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI9966805, Length=325, Percent_Identity=31.6923076923077, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI154759257, Length=408, Percent_Identity=28.921568627451, Blast_Score=139, Evalue=6e-33, Organism=Escherichia coli, GI1787016, Length=380, Percent_Identity=45.2631578947368, Blast_Score=328, Evalue=5e-91, Organism=Escherichia coli, GI87082221, Length=369, Percent_Identity=45.2574525745258, Blast_Score=315, Evalue=4e-87, Organism=Escherichia coli, GI1788930, Length=370, Percent_Identity=44.3243243243243, Blast_Score=283, Evalue=2e-77, Organism=Escherichia coli, GI1790214, Length=410, Percent_Identity=38.5365853658537, Blast_Score=266, Evalue=2e-72, Organism=Escherichia coli, GI1787605, Length=367, Percent_Identity=42.2343324250681, Blast_Score=251, Evalue=7e-68, Organism=Escherichia coli, GI48994977, Length=355, Percent_Identity=24.5070422535211, Blast_Score=76, Evalue=5e-15, Organism=Caenorhabditis elegans, GI115533224, Length=433, Percent_Identity=37.1824480369515, Blast_Score=267, Evalue=8e-72, Organism=Caenorhabditis elegans, GI17555296, Length=370, Percent_Identity=37.5675675675676, Blast_Score=259, Evalue=2e-69, Organism=Caenorhabditis elegans, GI17507121, Length=369, Percent_Identity=37.3983739837398, Blast_Score=250, Evalue=8e-67, Organism=Caenorhabditis elegans, GI71995724, Length=369, Percent_Identity=37.1273712737127, Blast_Score=250, Evalue=1e-66, Organism=Caenorhabditis elegans, GI17552642, Length=367, Percent_Identity=38.4196185286104, Blast_Score=247, Evalue=8e-66, Organism=Caenorhabditis elegans, GI71995514, Length=384, Percent_Identity=38.28125, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17510307, Length=384, Percent_Identity=38.28125, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17510309, Length=384, Percent_Identity=38.28125, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI71987143, Length=371, Percent_Identity=35.8490566037736, Blast_Score=244, Evalue=4e-65, Organism=Caenorhabditis elegans, GI86570094, Length=352, Percent_Identity=38.9204545454545, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI32565321, Length=379, Percent_Identity=35.6200527704486, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71995718, Length=376, Percent_Identity=36.968085106383, Blast_Score=231, Evalue=8e-61, Organism=Caenorhabditis elegans, GI17552114, Length=366, Percent_Identity=33.0601092896175, Blast_Score=227, Evalue=9e-60, Organism=Caenorhabditis elegans, GI17537549, Length=358, Percent_Identity=37.1508379888268, Blast_Score=224, Evalue=6e-59, Organism=Caenorhabditis elegans, GI17507945, Length=361, Percent_Identity=36.8421052631579, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI71999646, Length=374, Percent_Identity=33.9572192513369, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI71999644, Length=375, Percent_Identity=33.8666666666667, Blast_Score=218, Evalue=4e-57, Organism=Caenorhabditis elegans, GI115532548, Length=379, Percent_Identity=33.7730870712401, Blast_Score=207, Evalue=6e-54, Organism=Caenorhabditis elegans, GI115532546, Length=379, Percent_Identity=33.7730870712401, Blast_Score=207, Evalue=9e-54, Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=34.9593495934959, Blast_Score=204, Evalue=6e-53, Organism=Caenorhabditis elegans, GI17507881, Length=374, Percent_Identity=35.5614973262032, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17507879, Length=369, Percent_Identity=33.8753387533875, Blast_Score=198, Evalue=4e-51, Organism=Caenorhabditis elegans, GI71982858, Length=352, Percent_Identity=32.3863636363636, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17510559, Length=375, Percent_Identity=32.2666666666667, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI193206561, Length=351, Percent_Identity=31.9088319088319, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17509811, Length=370, Percent_Identity=31.0810810810811, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17536101, Length=393, Percent_Identity=31.2977099236641, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17536099, Length=393, Percent_Identity=31.2977099236641, Blast_Score=178, Evalue=4e-45, Organism=Caenorhabditis elegans, GI193208216, Length=384, Percent_Identity=33.59375, Blast_Score=178, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17536103, Length=393, Percent_Identity=31.0432569974555, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17505370, Length=359, Percent_Identity=31.4763231197772, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI71990816, Length=361, Percent_Identity=33.2409972299169, Blast_Score=171, Evalue=6e-43, Organism=Caenorhabditis elegans, GI17553716, Length=360, Percent_Identity=29.1666666666667, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17508543, Length=381, Percent_Identity=28.3464566929134, Blast_Score=161, Evalue=6e-40, Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=31.6326530612245, Blast_Score=161, Evalue=7e-40, Organism=Caenorhabditis elegans, GI32564046, Length=383, Percent_Identity=31.5926892950392, Blast_Score=154, Evalue=9e-38, Organism=Caenorhabditis elegans, GI25148203, Length=421, Percent_Identity=26.1282660332542, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17556951, Length=374, Percent_Identity=27.5401069518717, Blast_Score=138, Evalue=5e-33, Organism=Caenorhabditis elegans, GI25148291, Length=418, Percent_Identity=26.3157894736842, Blast_Score=138, Evalue=7e-33, Organism=Caenorhabditis elegans, GI71982862, Length=203, Percent_Identity=34.4827586206897, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71997889, Length=440, Percent_Identity=27.9545454545455, Blast_Score=121, Evalue=8e-28, Organism=Caenorhabditis elegans, GI71987152, Length=106, Percent_Identity=42.4528301886792, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI25148205, Length=348, Percent_Identity=23.8505747126437, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17566630, Length=335, Percent_Identity=25.6716417910448, Blast_Score=93, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6324217, Length=351, Percent_Identity=41.3105413105413, Blast_Score=271, Evalue=1e-73, Organism=Saccharomyces cerevisiae, GI6325138, Length=385, Percent_Identity=38.4415584415584, Blast_Score=263, Evalue=3e-71, Organism=Saccharomyces cerevisiae, GI6324778, Length=401, Percent_Identity=38.9027431421446, Blast_Score=261, Evalue=1e-70, Organism=Saccharomyces cerevisiae, GI6321856, Length=376, Percent_Identity=37.7659574468085, Blast_Score=256, Evalue=4e-69, Organism=Saccharomyces cerevisiae, GI6321360, Length=362, Percent_Identity=38.3977900552486, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6320041, Length=369, Percent_Identity=35.7723577235772, Blast_Score=231, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6320224, Length=370, Percent_Identity=33.7837837837838, Blast_Score=231, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=354, Percent_Identity=36.1581920903955, Blast_Score=227, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6322912, Length=368, Percent_Identity=35.054347826087, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6322323, Length=368, Percent_Identity=35.054347826087, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6324620, Length=377, Percent_Identity=36.3395225464191, Blast_Score=216, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6320449, Length=389, Percent_Identity=33.6760925449871, Blast_Score=214, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6320173, Length=421, Percent_Identity=30.166270783848, Blast_Score=206, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6321963, Length=381, Percent_Identity=34.1207349081365, Blast_Score=202, Evalue=9e-53, Organism=Saccharomyces cerevisiae, GI6322427, Length=375, Percent_Identity=32.5333333333333, Blast_Score=197, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6323947, Length=344, Percent_Identity=34.3023255813954, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6320119, Length=384, Percent_Identity=32.03125, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6321111, Length=392, Percent_Identity=33.4183673469388, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6319714, Length=376, Percent_Identity=30.5851063829787, Blast_Score=183, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6321267, Length=424, Percent_Identity=30.188679245283, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6323306, Length=465, Percent_Identity=28.3870967741935, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6319618, Length=417, Percent_Identity=28.7769784172662, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6320400, Length=380, Percent_Identity=28.4210526315789, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6322876, Length=228, Percent_Identity=29.8245614035088, Blast_Score=103, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6321374, Length=417, Percent_Identity=24.9400479616307, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6324366, Length=138, Percent_Identity=31.1594202898551, Blast_Score=73, Evalue=9e-14, Organism=Drosophila melanogaster, GI28574962, Length=369, Percent_Identity=39.5663956639566, Blast_Score=268, Evalue=4e-72, Organism=Drosophila melanogaster, GI21355075, Length=363, Percent_Identity=37.7410468319559, Blast_Score=261, Evalue=7e-70, Organism=Drosophila melanogaster, GI18857967, Length=421, Percent_Identity=36.3420427553444, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI24662330, Length=366, Percent_Identity=39.0710382513661, Blast_Score=254, Evalue=7e-68, Organism=Drosophila melanogaster, GI24644483, Length=353, Percent_Identity=39.3767705382436, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI281361218, Length=353, Percent_Identity=39.3767705382436, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI24644481, Length=353, Percent_Identity=39.3767705382436, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI24644487, Length=353, Percent_Identity=39.3767705382436, Blast_Score=252, Evalue=3e-67, Organism=Drosophila melanogaster, GI45551833, Length=353, Percent_Identity=39.3767705382436, Blast_Score=252, Evalue=3e-67, Organism=Drosophila melanogaster, GI24644485, Length=353, Percent_Identity=39.3767705382436, Blast_Score=252, Evalue=3e-67, Organism=Drosophila melanogaster, GI24644479, Length=353, Percent_Identity=39.3767705382436, Blast_Score=252, Evalue=3e-67, Organism=Drosophila melanogaster, GI24584399, Length=416, Percent_Identity=35.8173076923077, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24645031, Length=369, Percent_Identity=36.8563685636856, Blast_Score=245, Evalue=5e-65, Organism=Drosophila melanogaster, GI17985987, Length=372, Percent_Identity=39.7849462365591, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24585582, Length=370, Percent_Identity=36.7567567567568, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI24642151, Length=353, Percent_Identity=37.3937677053824, Blast_Score=238, Evalue=5e-63, Organism=Drosophila melanogaster, GI24584994, Length=380, Percent_Identity=36.5789473684211, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI24583279, Length=368, Percent_Identity=34.5108695652174, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24583281, Length=368, Percent_Identity=34.5108695652174, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI21356161, Length=375, Percent_Identity=34.6666666666667, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=35.6741573033708, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI281365720, Length=313, Percent_Identity=38.3386581469649, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI17136814, Length=382, Percent_Identity=34.5549738219895, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI28575014, Length=367, Percent_Identity=33.5149863760218, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI24582080, Length=368, Percent_Identity=33.695652173913, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24582078, Length=368, Percent_Identity=33.695652173913, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI17136248, Length=368, Percent_Identity=33.695652173913, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24582075, Length=368, Percent_Identity=33.695652173913, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24581954, Length=354, Percent_Identity=32.4858757062147, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24581952, Length=354, Percent_Identity=32.4858757062147, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24581956, Length=354, Percent_Identity=32.4858757062147, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI17647335, Length=371, Percent_Identity=29.1105121293801, Blast_Score=177, Evalue=9e-45, Organism=Drosophila melanogaster, GI24642822, Length=394, Percent_Identity=30.9644670050761, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI20130173, Length=454, Percent_Identity=30.1762114537445, Blast_Score=175, Evalue=6e-44, Organism=Drosophila melanogaster, GI24666101, Length=368, Percent_Identity=31.25, Blast_Score=175, Evalue=7e-44, Organism=Drosophila melanogaster, GI28571808, Length=376, Percent_Identity=30.0531914893617, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI28571809, Length=376, Percent_Identity=30.0531914893617, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI21355559, Length=401, Percent_Identity=32.4189526184539, Blast_Score=171, Evalue=7e-43, Organism=Drosophila melanogaster, GI24643725, Length=385, Percent_Identity=29.8701298701299, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI18859659, Length=445, Percent_Identity=30.1123595505618, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI28571338, Length=445, Percent_Identity=30.1123595505618, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24640164, Length=380, Percent_Identity=27.8947368421053, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI19920478, Length=395, Percent_Identity=28.8607594936709, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24668515, Length=329, Percent_Identity=29.1793313069909, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI17136666, Length=401, Percent_Identity=28.428927680798, Blast_Score=127, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 48373; Mature: 48241
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSDLGIAPTILRALQAAGYENPTAVQAEAVPAAIAGRDLLVSAQTGSGKTAAFLLPAL CCCCCCCCHHHHHHHHHHCCCCCCCCEEHHHCCHHHCCCEEEEEECCCCCCHHHHHHHHH TKLSERSTAKGQGPRVLVLTPTRELAQQVEKNALEYGKDLRWMRTACLVGGSSFGYQIRA HHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LSRPIDLIVATPGRLMDHMRSGRIDFSRLEMLVLDEADRMLDMGFIDDIEAIVKATPETR CCCCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHCCCCHH QTVLFSATLDGIVGRMAEKMTRDPQRIEIARTETSGGTIEEHLLYADDLNHKHRLLDYIL HEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHEEEHHCCCHHHHHHHHHH KESGFDQCVIFSATKAYSEELADKLSDQGYSAACLHGDMPQSWRNRTLNDLRRGRIKVLV HHCCCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCHHHHCCCCEEEEE ATDVAARGIDVPTITHVVNFDLPKQAEDYVHRIGRTGRAGRDGTAITLAESKEFHKVRRI EECHHHCCCCCCHHHHEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHH EQYLKRQITEGVIDGLEPTRRPPKGPRRNNNGKGGYGDRRHGSGNGRGGYGNNRREGGYQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GQRREGGYQGNRGPRSSAQ CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TFSDLGIAPTILRALQAAGYENPTAVQAEAVPAAIAGRDLLVSAQTGSGKTAAFLLPAL CCCCCCCHHHHHHHHHHCCCCCCCCEEHHHCCHHHCCCEEEEEECCCCCCHHHHHHHHH TKLSERSTAKGQGPRVLVLTPTRELAQQVEKNALEYGKDLRWMRTACLVGGSSFGYQIRA HHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LSRPIDLIVATPGRLMDHMRSGRIDFSRLEMLVLDEADRMLDMGFIDDIEAIVKATPETR CCCCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHCCCCHH QTVLFSATLDGIVGRMAEKMTRDPQRIEIARTETSGGTIEEHLLYADDLNHKHRLLDYIL HEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHEEEHHCCCHHHHHHHHHH KESGFDQCVIFSATKAYSEELADKLSDQGYSAACLHGDMPQSWRNRTLNDLRRGRIKVLV HHCCCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCHHHHCCCCEEEEE ATDVAARGIDVPTITHVVNFDLPKQAEDYVHRIGRTGRAGRDGTAITLAESKEFHKVRRI EECHHHCCCCCCHHHHEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHH EQYLKRQITEGVIDGLEPTRRPPKGPRRNNNGKGGYGDRRHGSGNGRGGYGNNRREGGYQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GQRREGGYQGNRGPRSSAQ CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]