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The map label for this gene is flgC1 [H]

Identifier: 34498342

GI number: 34498342

Start: 3163452

End: 3163862

Strand: Reverse

Name: flgC1 [H]

Synonym: CV_2887

Alternate gene names: 34498342

Gene position: 3163862-3163452 (Counterclockwise)

Preceding gene: 34498343

Following gene: 34498341

Centisome position: 66.59

GC content: 62.29

Gene sequence:

>411_bases
ATGTCCTTGTCCAATCTCTTCAATATTTCGGGTTCCGCGCTTTCCGCGCAGTCGATGCGGCTCAACGTGGTGGCCAGCAA
CCTGGCCAACGCCGAAAGCGCCACCAGCTCCACCGGGCAGCCGTACAAGGGTCGCCACGTGGTGTTCACCGCGGTGCCGG
TGGATGCCGCCCAGCCCCAGGTGGCCGGCGTGCGCGTCACTTCGGTGGTAGAGGATCAATCGCCGCCGCGGCTGAAGTAC
GAACCGGGTAATCCGCTGGCTGACGAGCGCGGCTACGTGACCATGCCCAATGTCAACGTGGTGGAGGAGATGGCCGACAT
GATCGCCGCTTCTCGCGCCTACCAGAACAACGTTGAGATGATGAACACCGCCAAGAGTCTGCTGCAGAAAACCCTGCAGC
TGGGCCAGTAA

Upstream 100 bases:

>100_bases
GACAACGCTTTGCAGTATCAGTCCACGCTGGCGTTTCTGAACAAGAAGATCAGCGGGCTGAACTCGGCGATCCAGGGCAG
CGGCAACGGAGGCTGATTGA

Downstream 100 bases:

>100_bases
TTTAAGGAGCGACAGTCATGGCCTCTGCAGCTGGAACCACTTTCAATTTCAACTCGCTGAACAATCAGCTGGCGCCGGGC
GCCTCCAGCATGCAGGCGGC

Product: flagellar basal-body rod protein flgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSLSNLFNISGSALSAQSMRLNVVASNLANAESATSSTGQPYKGRHVVFTAVPVDAAQPQVAGVRVTSVVEDQSPPRLKY
EPGNPLADERGYVTMPNVNVVEEMADMIAASRAYQNNVEMMNTAKSLLQKTLQLGQ

Sequences:

>Translated_136_residues
MSLSNLFNISGSALSAQSMRLNVVASNLANAESATSSTGQPYKGRHVVFTAVPVDAAQPQVAGVRVTSVVEDQSPPRLKY
EPGNPLADERGYVTMPNVNVVEEMADMIAASRAYQNNVEMMNTAKSLLQKTLQLGQ
>Mature_135_residues
SLSNLFNISGSALSAQSMRLNVVASNLANAESATSSTGQPYKGRHVVFTAVPVDAAQPQVAGVRVTSVVEDQSPPRLKYE
PGNPLADERGYVTMPNVNVVEEMADMIAASRAYQNNVEMMNTAKSLLQKTLQLGQ

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=138, Percent_Identity=60.1449275362319, Blast_Score=160, Evalue=3e-41,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14541; Mature: 14409

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSNLFNISGSALSAQSMRLNVVASNLANAESATSSTGQPYKGRHVVFTAVPVDAAQPQ
CCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
VAGVRVTSVVEDQSPPRLKYEPGNPLADERGYVTMPNVNVVEEMADMIAASRAYQNNVEM
CCCEEEEEEECCCCCCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCHHH
MNTAKSLLQKTLQLGQ
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLSNLFNISGSALSAQSMRLNVVASNLANAESATSSTGQPYKGRHVVFTAVPVDAAQPQ
CCCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
VAGVRVTSVVEDQSPPRLKYEPGNPLADERGYVTMPNVNVVEEMADMIAASRAYQNNVEM
CCCEEEEEEECCCCCCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCHHH
MNTAKSLLQKTLQLGQ
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA