| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is dbpA [H]
Identifier: 34498308
GI number: 34498308
Start: 3109783
End: 3111165
Strand: Direct
Name: dbpA [H]
Synonym: CV_2853
Alternate gene names: 34498308
Gene position: 3109783-3111165 (Clockwise)
Preceding gene: 34498307
Following gene: 34498315
Centisome position: 65.45
GC content: 67.1
Gene sequence:
>1383_bases GTGAAACCAGCCGCTTTTTCCACCCTGCCCCTGCCCGCTCCCTTGCTGTCCAACCTGGACAGCCTGGGCTACCACCAGAT GACCGCCATCCAGGCCGCCAGCCTGCCCGCCATTCTGGAAGGCCGCGACCTGATCGCCCAGGCCAAGACCGGCAGCGGCA AGACGGCTGCGTTCGGCCTGGGCCTGTTGTCCAGCATCAATCCGCGCTGGTTCGGCGTGCAGGCGCTGGTGATGTGCCCG ACGCGCGAGCTGGCCGATCAGGTGGCGCAGGAAATCCGCCGCCTGGCGCGCGCCATCGACAATATCAAGGTGGTGACGCT GACCGGCGGCACGCCGATGGGACCGCAGATCGGCTCGCTGGAGCACGGCGCCCATATCGTCGTCGGCACGCCGGGCCGGC TGCAGGACCACCTGTTCCGCGAAACGCTGAACCTGACCGGCGTGAAGACGCTGGTGCTGGACGAGGCGGACCGCATGATA GACATGGGCTTCATCGAGGAAATCGTCGGCATCGTCCGCGCCTGCCCGAGAACCCGCCAGACCCTGCTGTTCTCGGCCAC CTATCCGGAAGACATCCGCAAGGCCAGCGCGCAGTTCCTGAAAAATCCGGTGGAAGTGAAGGTGGAGTCGCTGCACAAGG CCGACCACATCGAGCAGTGGTTCTACAAGGTGAAGCCGGAAACCCGGCTGGAGACGGTCAGCCGCATCCTGCGCCACCTA CGCCCCACTTCGGCGCTGGCCTTCTGCAACACCCGCGAGCGCTGCAAAGAGCTGGTGCGCGAGCTGCAGGAACAGGGCTT CCACGCGCTGACGCTGCACGGCGACCTGGAGCAGCGCGAGCGCGACCAGATCCTGCTGCGCTTCGCCAACAAGAGCGCCA CCGTGCTGGTGGCCACCGACGTGGCGGCGCGCGGCCTGGACATCAAGGAGCTGGACGTGGTGATCAATGTCGACGTCACC CACGATCCGGAAGTGCACATCCACCGCATCGGCCGCACCGGCCGCGGCGAGCAGCACGGCCTGGCGCTGACCCTGGCCAC CGACAGCGAAGCCAAGCGCCTGGTGCAGATCGAAAACTACCAGCAGGCCGAGCTGACCTGGGCCGACGTCGAAGAGCTGA CCCCGGCGCCGGGCGGCCCGCTGCTGCCGCCGATGGTGACGCTGGAGATCGCCGGCGGCAAACGCGAGAAGCTGCGCCCG GGCGACCTGTTGGGCGCGCTGACCGGCGAGGCCGGCTTCGCCGGCAGCCAGATCGGCAAGATCAACATCTTCGAGTTCAA CAGCTTCGTCGCGCTGGACCGCGCCATCGCCGAAGACGCGCTGGCCAAGCTATCCCGCGGCAAGATCAAGGGCAAGCAGT TCAAGATGCGCTTGGTCGGCTGA
Upstream 100 bases:
>100_bases CCCGCCGGGCGTTTTTCCAACCGAAAATGCGCCGGGCATTTGGCCGCGAGCCTCACTGCTGTTACACTGCCCAGCCTTTA GCCAACCGCGCCAAGTCATT
Downstream 100 bases:
>100_bases TCCGCGCCGCCGCAGATCAAAAAGGCCATCCCGCGGGATGGCCTTGTCGTTTCGCCTCGCCGGCCGCCCTCAGTCGCGTC CCAGCTTGGAGTAGGCAATC
Product: ATP-dependent RNA helicase DbpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MKPAAFSTLPLPAPLLSNLDSLGYHQMTAIQAASLPAILEGRDLIAQAKTGSGKTAAFGLGLLSSINPRWFGVQALVMCP TRELADQVAQEIRRLARAIDNIKVVTLTGGTPMGPQIGSLEHGAHIVVGTPGRLQDHLFRETLNLTGVKTLVLDEADRMI DMGFIEEIVGIVRACPRTRQTLLFSATYPEDIRKASAQFLKNPVEVKVESLHKADHIEQWFYKVKPETRLETVSRILRHL RPTSALAFCNTRERCKELVRELQEQGFHALTLHGDLEQRERDQILLRFANKSATVLVATDVAARGLDIKELDVVINVDVT HDPEVHIHRIGRTGRGEQHGLALTLATDSEAKRLVQIENYQQAELTWADVEELTPAPGGPLLPPMVTLEIAGGKREKLRP GDLLGALTGEAGFAGSQIGKINIFEFNSFVALDRAIAEDALAKLSRGKIKGKQFKMRLVG
Sequences:
>Translated_460_residues MKPAAFSTLPLPAPLLSNLDSLGYHQMTAIQAASLPAILEGRDLIAQAKTGSGKTAAFGLGLLSSINPRWFGVQALVMCP TRELADQVAQEIRRLARAIDNIKVVTLTGGTPMGPQIGSLEHGAHIVVGTPGRLQDHLFRETLNLTGVKTLVLDEADRMI DMGFIEEIVGIVRACPRTRQTLLFSATYPEDIRKASAQFLKNPVEVKVESLHKADHIEQWFYKVKPETRLETVSRILRHL RPTSALAFCNTRERCKELVRELQEQGFHALTLHGDLEQRERDQILLRFANKSATVLVATDVAARGLDIKELDVVINVDVT HDPEVHIHRIGRTGRGEQHGLALTLATDSEAKRLVQIENYQQAELTWADVEELTPAPGGPLLPPMVTLEIAGGKREKLRP GDLLGALTGEAGFAGSQIGKINIFEFNSFVALDRAIAEDALAKLSRGKIKGKQFKMRLVG >Mature_460_residues MKPAAFSTLPLPAPLLSNLDSLGYHQMTAIQAASLPAILEGRDLIAQAKTGSGKTAAFGLGLLSSINPRWFGVQALVMCP TRELADQVAQEIRRLARAIDNIKVVTLTGGTPMGPQIGSLEHGAHIVVGTPGRLQDHLFRETLNLTGVKTLVLDEADRMI DMGFIEEIVGIVRACPRTRQTLLFSATYPEDIRKASAQFLKNPVEVKVESLHKADHIEQWFYKVKPETRLETVSRILRHL RPTSALAFCNTRERCKELVRELQEQGFHALTLHGDLEQRERDQILLRFANKSATVLVATDVAARGLDIKELDVVINVDVT HDPEVHIHRIGRTGRGEQHGLALTLATDSEAKRLVQIENYQQAELTWADVEELTPAPGGPLLPPMVTLEIAGGKREKLRP GDLLGALTGEAGFAGSQIGKINIFEFNSFVALDRAIAEDALAKLSRGKIKGKQFKMRLVG
Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=363, Percent_Identity=35.5371900826446, Blast_Score=252, Evalue=5e-67, Organism=Homo sapiens, GI4758138, Length=362, Percent_Identity=38.121546961326, Blast_Score=238, Evalue=6e-63, Organism=Homo sapiens, GI45446747, Length=368, Percent_Identity=38.8586956521739, Blast_Score=234, Evalue=9e-62, Organism=Homo sapiens, GI45446743, Length=368, Percent_Identity=38.8586956521739, Blast_Score=234, Evalue=9e-62, Organism=Homo sapiens, GI20149629, Length=356, Percent_Identity=37.0786516853933, Blast_Score=228, Evalue=7e-60, Organism=Homo sapiens, GI148613856, Length=367, Percent_Identity=36.7847411444142, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI38201710, Length=367, Percent_Identity=36.7847411444142, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI262118318, Length=383, Percent_Identity=38.1201044386423, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI262231852, Length=383, Percent_Identity=38.1201044386423, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI216548263, Length=383, Percent_Identity=38.1201044386423, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI41327773, Length=349, Percent_Identity=38.9684813753582, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI13518015, Length=383, Percent_Identity=38.1201044386423, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI31542656, Length=378, Percent_Identity=36.5079365079365, Blast_Score=221, Evalue=8e-58, Organism=Homo sapiens, GI164664518, Length=357, Percent_Identity=32.2128851540616, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI50659095, Length=375, Percent_Identity=36, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI224593278, Length=361, Percent_Identity=37.3961218836565, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI4503529, Length=365, Percent_Identity=35.0684931506849, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI83700235, Length=359, Percent_Identity=36.2116991643454, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI21040371, Length=364, Percent_Identity=32.6923076923077, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI13129006, Length=386, Percent_Identity=34.7150259067358, Blast_Score=205, Evalue=6e-53, Organism=Homo sapiens, GI4758112, Length=364, Percent_Identity=32.1428571428571, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI18375623, Length=364, Percent_Identity=32.1428571428571, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI301171475, Length=365, Percent_Identity=36.986301369863, Blast_Score=202, Evalue=5e-52, Organism=Homo sapiens, GI87196351, Length=365, Percent_Identity=36.986301369863, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI301171467, Length=365, Percent_Identity=36.986301369863, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI41327771, Length=383, Percent_Identity=33.420365535248, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI169881239, Length=367, Percent_Identity=37.6021798365123, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI13514809, Length=367, Percent_Identity=37.6021798365123, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI188035877, Length=390, Percent_Identity=33.5897435897436, Blast_Score=195, Evalue=7e-50, Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=35.9550561797753, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI256223453, Length=364, Percent_Identity=31.043956043956, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI41327776, Length=355, Percent_Identity=34.0845070422535, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI222352149, Length=365, Percent_Identity=33.1506849315069, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI164419732, Length=368, Percent_Identity=31.5217391304348, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI13514831, Length=363, Percent_Identity=35.2617079889807, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI38327634, Length=334, Percent_Identity=36.5269461077844, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI55749865, Length=357, Percent_Identity=31.0924369747899, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI51094101, Length=372, Percent_Identity=31.7204301075269, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI164419743, Length=372, Percent_Identity=31.7204301075269, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI6005743, Length=355, Percent_Identity=32.112676056338, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI8922886, Length=355, Percent_Identity=32.112676056338, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI41327779, Length=476, Percent_Identity=29.4117647058824, Blast_Score=172, Evalue=7e-43, Organism=Homo sapiens, GI62241022, Length=367, Percent_Identity=30.5177111716621, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI9506931, Length=449, Percent_Identity=30.7349665924276, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI17505907, Length=421, Percent_Identity=31.353919239905, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI38569503, Length=363, Percent_Identity=32.2314049586777, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI62241024, Length=316, Percent_Identity=32.5949367088608, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI38569505, Length=363, Percent_Identity=32.2314049586777, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=31.3609467455621, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI9966805, Length=303, Percent_Identity=35.3135313531353, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI256773275, Length=374, Percent_Identity=29.4117647058824, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI20336298, Length=359, Percent_Identity=30.3621169916435, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI154759257, Length=440, Percent_Identity=26.5909090909091, Blast_Score=109, Evalue=5e-24, Organism=Escherichia coli, GI1787605, Length=458, Percent_Identity=52.1834061135371, Blast_Score=459, Evalue=1e-130, Organism=Escherichia coli, GI87082221, Length=399, Percent_Identity=40.6015037593985, Blast_Score=278, Evalue=6e-76, Organism=Escherichia coli, GI1787016, Length=380, Percent_Identity=38.6842105263158, Blast_Score=250, Evalue=1e-67, Organism=Escherichia coli, GI1790214, Length=365, Percent_Identity=38.0821917808219, Blast_Score=214, Evalue=1e-56, Organism=Escherichia coli, GI1788930, Length=369, Percent_Identity=36.3143631436314, Blast_Score=195, Evalue=5e-51, Organism=Escherichia coli, GI48994977, Length=322, Percent_Identity=24.223602484472, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71995724, Length=363, Percent_Identity=36.9146005509642, Blast_Score=259, Evalue=2e-69, Organism=Caenorhabditis elegans, GI17507121, Length=363, Percent_Identity=36.9146005509642, Blast_Score=259, Evalue=3e-69, Organism=Caenorhabditis elegans, GI71987143, Length=363, Percent_Identity=36.3636363636364, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI17555296, Length=368, Percent_Identity=37.7717391304348, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI115533224, Length=368, Percent_Identity=39.6739130434783, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17552114, Length=357, Percent_Identity=31.6526610644258, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI86570094, Length=342, Percent_Identity=37.4269005847953, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71982858, Length=364, Percent_Identity=32.1428571428571, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17510307, Length=373, Percent_Identity=36.4611260053619, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI71995514, Length=358, Percent_Identity=36.8715083798883, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17510309, Length=373, Percent_Identity=36.4611260053619, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17552642, Length=356, Percent_Identity=37.0786516853933, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI71995718, Length=367, Percent_Identity=37.3297002724796, Blast_Score=197, Evalue=8e-51, Organism=Caenorhabditis elegans, GI32565321, Length=372, Percent_Identity=33.8709677419355, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17507877, Length=377, Percent_Identity=35.8090185676393, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17510559, Length=387, Percent_Identity=34.1085271317829, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI71999646, Length=360, Percent_Identity=31.3888888888889, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17507945, Length=359, Percent_Identity=37.3259052924791, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI71999644, Length=353, Percent_Identity=31.728045325779, Blast_Score=191, Evalue=8e-49, Organism=Caenorhabditis elegans, GI115532546, Length=371, Percent_Identity=32.6145552560647, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=35.8490566037736, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI115532548, Length=371, Percent_Identity=32.6145552560647, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI193206561, Length=353, Percent_Identity=29.1784702549575, Blast_Score=182, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17536099, Length=397, Percent_Identity=30.4785894206549, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17536101, Length=397, Percent_Identity=30.4785894206549, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI17536103, Length=397, Percent_Identity=30.4785894206549, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17507881, Length=404, Percent_Identity=33.1683168316832, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17509811, Length=360, Percent_Identity=31.9444444444444, Blast_Score=177, Evalue=7e-45, Organism=Caenorhabditis elegans, GI17505370, Length=337, Percent_Identity=35.9050445103858, Blast_Score=177, Evalue=8e-45, Organism=Caenorhabditis elegans, GI17553716, Length=354, Percent_Identity=29.0960451977401, Blast_Score=173, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17537549, Length=351, Percent_Identity=32.1937321937322, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI193208216, Length=377, Percent_Identity=28.6472148541114, Blast_Score=144, Evalue=7e-35, Organism=Caenorhabditis elegans, GI25148203, Length=402, Percent_Identity=26.3681592039801, Blast_Score=138, Evalue=5e-33, Organism=Caenorhabditis elegans, GI71990816, Length=364, Percent_Identity=31.5934065934066, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI17507641, Length=383, Percent_Identity=31.0704960835509, Blast_Score=134, Evalue=9e-32, Organism=Caenorhabditis elegans, GI17556951, Length=406, Percent_Identity=28.0788177339901, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17508543, Length=373, Percent_Identity=28.686327077748, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI32564046, Length=369, Percent_Identity=30.6233062330623, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI25148291, Length=364, Percent_Identity=29.6703296703297, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI71982862, Length=201, Percent_Identity=33.3333333333333, Blast_Score=121, Evalue=8e-28, Organism=Caenorhabditis elegans, GI71997889, Length=377, Percent_Identity=27.3209549071618, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI25148205, Length=330, Percent_Identity=26.0606060606061, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71987152, Length=104, Percent_Identity=40.3846153846154, Blast_Score=95, Evalue=7e-20, Organism=Saccharomyces cerevisiae, GI6320224, Length=363, Percent_Identity=34.9862258953168, Blast_Score=244, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6324217, Length=358, Percent_Identity=38.268156424581, Blast_Score=236, Evalue=5e-63, Organism=Saccharomyces cerevisiae, GI6324778, Length=371, Percent_Identity=38.544474393531, Blast_Score=222, Evalue=8e-59, Organism=Saccharomyces cerevisiae, GI6320041, Length=357, Percent_Identity=33.8935574229692, Blast_Score=221, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6325138, Length=384, Percent_Identity=36.71875, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6322912, Length=379, Percent_Identity=35.3562005277045, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6322323, Length=379, Percent_Identity=35.3562005277045, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6321360, Length=357, Percent_Identity=36.6946778711485, Blast_Score=212, Evalue=8e-56, Organism=Saccharomyces cerevisiae, GI6320119, Length=359, Percent_Identity=31.1977715877437, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=36.1111111111111, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6321856, Length=357, Percent_Identity=35.2941176470588, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6321963, Length=388, Percent_Identity=33.5051546391753, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6324620, Length=388, Percent_Identity=30.1546391752577, Blast_Score=189, Evalue=8e-49, Organism=Saccharomyces cerevisiae, GI6323947, Length=365, Percent_Identity=34.5205479452055, Blast_Score=177, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6320449, Length=373, Percent_Identity=31.9034852546917, Blast_Score=176, Evalue=9e-45, Organism=Saccharomyces cerevisiae, GI6322427, Length=380, Percent_Identity=31.3157894736842, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6319714, Length=358, Percent_Identity=30.7262569832402, Blast_Score=171, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6321111, Length=395, Percent_Identity=30.126582278481, Blast_Score=169, Evalue=8e-43, Organism=Saccharomyces cerevisiae, GI6319618, Length=420, Percent_Identity=27.8571428571429, Blast_Score=154, Evalue=4e-38, Organism=Saccharomyces cerevisiae, GI6321267, Length=383, Percent_Identity=31.0704960835509, Blast_Score=149, Evalue=9e-37, Organism=Saccharomyces cerevisiae, GI6320173, Length=242, Percent_Identity=34.7107438016529, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6320400, Length=398, Percent_Identity=28.643216080402, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6323306, Length=412, Percent_Identity=25.9708737864078, Blast_Score=125, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6322876, Length=462, Percent_Identity=26.8398268398268, Blast_Score=113, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6324366, Length=360, Percent_Identity=25, Blast_Score=103, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6321374, Length=385, Percent_Identity=24.1558441558442, Blast_Score=88, Evalue=3e-18, Organism=Drosophila melanogaster, GI24645031, Length=363, Percent_Identity=36.6391184573003, Blast_Score=255, Evalue=4e-68, Organism=Drosophila melanogaster, GI28574962, Length=360, Percent_Identity=40, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24585582, Length=372, Percent_Identity=36.8279569892473, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI281361218, Length=360, Percent_Identity=38.3333333333333, Blast_Score=224, Evalue=8e-59, Organism=Drosophila melanogaster, GI24644481, Length=360, Percent_Identity=38.3333333333333, Blast_Score=224, Evalue=8e-59, Organism=Drosophila melanogaster, GI18857967, Length=429, Percent_Identity=33.5664335664336, Blast_Score=224, Evalue=8e-59, Organism=Drosophila melanogaster, GI24644487, Length=360, Percent_Identity=38.3333333333333, Blast_Score=224, Evalue=9e-59, Organism=Drosophila melanogaster, GI45551833, Length=360, Percent_Identity=38.3333333333333, Blast_Score=224, Evalue=9e-59, Organism=Drosophila melanogaster, GI24644485, Length=360, Percent_Identity=38.3333333333333, Blast_Score=224, Evalue=9e-59, Organism=Drosophila melanogaster, GI24644483, Length=360, Percent_Identity=38.3333333333333, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24644479, Length=360, Percent_Identity=38.3333333333333, Blast_Score=223, Evalue=1e-58, Organism=Drosophila melanogaster, GI24582080, Length=358, Percent_Identity=37.1508379888268, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI24582078, Length=358, Percent_Identity=37.1508379888268, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI17136248, Length=358, Percent_Identity=37.1508379888268, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI24582075, Length=358, Percent_Identity=37.1508379888268, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI21355075, Length=381, Percent_Identity=34.9081364829396, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24642151, Length=344, Percent_Identity=37.5, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI24584399, Length=358, Percent_Identity=38.268156424581, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI24662330, Length=337, Percent_Identity=39.7626112759644, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24583281, Length=353, Percent_Identity=31.4447592067989, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24583279, Length=353, Percent_Identity=31.4447592067989, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI17985987, Length=370, Percent_Identity=36.2162162162162, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI17977678, Length=355, Percent_Identity=36.9014084507042, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI21356161, Length=357, Percent_Identity=36.4145658263305, Blast_Score=198, Evalue=8e-51, Organism=Drosophila melanogaster, GI24584994, Length=376, Percent_Identity=34.0425531914894, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI28575014, Length=377, Percent_Identity=31.5649867374005, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI281365720, Length=306, Percent_Identity=39.5424836601307, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI17136814, Length=347, Percent_Identity=36.0230547550432, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24581954, Length=365, Percent_Identity=32.3287671232877, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI24581952, Length=365, Percent_Identity=32.3287671232877, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI24581956, Length=365, Percent_Identity=32.3287671232877, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI28571808, Length=333, Percent_Identity=34.8348348348348, Blast_Score=174, Evalue=9e-44, Organism=Drosophila melanogaster, GI28571809, Length=333, Percent_Identity=34.8348348348348, Blast_Score=174, Evalue=9e-44, Organism=Drosophila melanogaster, GI17647335, Length=364, Percent_Identity=30.2197802197802, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI21355559, Length=397, Percent_Identity=32.2418136020151, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI24666101, Length=359, Percent_Identity=33.4261838440111, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI18859659, Length=465, Percent_Identity=27.9569892473118, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI28571338, Length=465, Percent_Identity=27.9569892473118, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI24642822, Length=377, Percent_Identity=30.7692307692308, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24643725, Length=387, Percent_Identity=27.906976744186, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI20130173, Length=457, Percent_Identity=29.5404814004376, Blast_Score=139, Evalue=5e-33, Organism=Drosophila melanogaster, GI24668515, Length=324, Percent_Identity=29.320987654321, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI19920478, Length=348, Percent_Identity=29.8850574712644, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI17136666, Length=409, Percent_Identity=27.3838630806846, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI24640164, Length=377, Percent_Identity=22.8116710875332, Blast_Score=82, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50494; Mature: 50494
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPAAFSTLPLPAPLLSNLDSLGYHQMTAIQAASLPAILEGRDLIAQAKTGSGKTAAFGL CCCCCCCCCCCCCHHHHCHHHCCCHHHHHHHHHCCCHHHCCCHHEEECCCCCCCHHHHHH GLLSSINPRWFGVQALVMCPTRELADQVAQEIRRLARAIDNIKVVTLTGGTPMGPQIGSL HHHHCCCCCEECEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCC EHGAHIVVGTPGRLQDHLFRETLNLTGVKTLVLDEADRMIDMGFIEEIVGIVRACPRTRQ CCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCC TLLFSATYPEDIRKASAQFLKNPVEVKVESLHKADHIEQWFYKVKPETRLETVSRILRHL EEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC RPTSALAFCNTRERCKELVRELQEQGFHALTLHGDLEQRERDQILLRFANKSATVLVATD CCCHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHEEEECCCCCEEEEEEC VAARGLDIKELDVVINVDVTHDPEVHIHRIGRTGRGEQHGLALTLATDSEAKRLVQIENY HHHCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHEEECCC QQAELTWADVEELTPAPGGPLLPPMVTLEIAGGKREKLRPGDLLGALTGEAGFAGSQIGK CCCEEEHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHEECCCCCCCCCCCCCE INIFEFNSFVALDRAIAEDALAKLSRGKIKGKQFKMRLVG EEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC >Mature Secondary Structure MKPAAFSTLPLPAPLLSNLDSLGYHQMTAIQAASLPAILEGRDLIAQAKTGSGKTAAFGL CCCCCCCCCCCCCHHHHCHHHCCCHHHHHHHHHCCCHHHCCCHHEEECCCCCCCHHHHHH GLLSSINPRWFGVQALVMCPTRELADQVAQEIRRLARAIDNIKVVTLTGGTPMGPQIGSL HHHHCCCCCEECEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCC EHGAHIVVGTPGRLQDHLFRETLNLTGVKTLVLDEADRMIDMGFIEEIVGIVRACPRTRQ CCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCC TLLFSATYPEDIRKASAQFLKNPVEVKVESLHKADHIEQWFYKVKPETRLETVSRILRHL EEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC RPTSALAFCNTRERCKELVRELQEQGFHALTLHGDLEQRERDQILLRFANKSATVLVATD CCCHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHEEEECCCCCEEEEEEC VAARGLDIKELDVVINVDVTHDPEVHIHRIGRTGRGEQHGLALTLATDSEAKRLVQIENY HHHCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHEEECCC QQAELTWADVEELTPAPGGPLLPPMVTLEIAGGKREKLRPGDLLGALTGEAGFAGSQIGK CCCEEEHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHEECCCCCCCCCCCCCE INIFEFNSFVALDRAIAEDALAKLSRGKIKGKQFKMRLVG EEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]