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The map label for this gene is yoaH [H]

Identifier: 34498307

GI number: 34498307

Start: 3107729

End: 3109237

Strand: Direct

Name: yoaH [H]

Synonym: CV_2852

Alternate gene names: 34498307

Gene position: 3107729-3109237 (Clockwise)

Preceding gene: 34498304

Following gene: 34498308

Centisome position: 65.41

GC content: 69.25

Gene sequence:

>1509_bases
GTGGAGCAGGCCAAGGACCTGGCCCACAGCATGAACGAGATGACCCTGGCCGGCCTGACCGGCATGATGATCACCGGCAC
CGTCGGCCAGCGCGACGTGTTCCTGGACCAGATCCGCGAACTGTCGGCGGTGCGCGACTTGCGCGTGATACGCGGCGACG
CGGTCAGCAAGCAGTTCGGCCCCGGCAGCGCCGGCGACAAGGCCCGGCCGGGAGACGAAATCGAGCGCGCGGCCTTGCGC
GACGGCAAACCGCATATCGCCATAGAATCCACCCCGCAATTGGGCGAGCACCTGCGCGTGGTCTACCCGGCGCTGGCCTC
CGCCAACTACCTGGGCAAAAACTGCCTGGCCTGCCACCAAGTGGCCGACAAGACGCCGCTAGGCGTGGTCAGCATGCGGA
TTTCGCTGGAGAAGCCGTATGCGGCGGTCGACGCCTTCCGCACCCAGAGCATATTGTTCGCGCTGTTCGCCTCGCTGCCG
ATGCTGGCGGTGGTCTACCTGTTCATCCGCCGCTTCGTCACCCGCCCGCTGCGGGAAATGTCCCAGGGCCTGGCCGAGCT
GGCCAAGGGCGAGGGCGACCTCACCCGCCGTTTGCCGGAGCGCAGCCAAGACGAGATCGGCGTCACCGCCCGCCTGTTCA
ACCAGATGCTGGGCACCGTGGCCGGCCTGGTGCGCCAGGTCAGCGACAGCGCCGAGGCGGTGGCGCAATCGTCCCGCCGC
CTGTCGGACGGCGCCGGCCAGCTGGCCGCCAGCTCCCACCGCCAGAACAGCCAGTCCCAGGCCGCCGCCGAGGCGGTGGA
GCAATTGGCCGCCCACATCGGCGAGATCGCCGGCAAGGCCGAGCATGTCAGCAGCGGCGCAGAGGAAAGCCTGCAGCGCT
CGGAACAGGGCCGGCAGAGCCTGCACCGGCTGCAGCGCGAAGTGGGCCAGGTGGAAAGCGCGGTGCAACTGATGGCGCAG
GCGGAGAGCGACCTGGTCAACTCCACCGCCGTGATCACCCACATGACCAAGGAAGTGCGCGAGATCGCCGAACAGACCAA
TCTCTTGGCGTTGAACGCGGCGATCGAAGCCGCGCGCGCCGGCGAACAGGGCCGCGGCTTCGCCGTGGTGGCCGACGAGG
TGCGCAAGCTGGCGGAGAAATCGGCCAGGTCCGCCAGCGAGATCGACGCCGTCACCGGCTCGCTCAACGACAAGACCGAC
GCGGTGCGCCAGGCGGTGAGCGCCGGCCTGCAGTCGCTGGAAGCCAGCCGCCACTCCACCGCCAGCGTGGCCGAGGTGCT
GGACGCGGCCAACCAGTCGGTGGCCGAGGTGCGCAGCGGCCTCAGGCAGATCGTGGAAGTCACCGAGCAACAGCGCCGCT
CCAGCCAGACGGTGAACGCCAATATCGACGCCATCGCCGGCATGGCCCGCGCCAACGACGCCGACATCCGCGAAACCGTG
GGCGCGGCCGAGGAACTGGAGGCGCTGGCCAAGCGGCTGACCGACTCAGTGTCGCGTTTCCGGGTGTGA

Upstream 100 bases:

>100_bases
GCCGATCTGGCTGCGCCTGACCGGCGCGATCTGGACCTGTCTGGTGCTGGCCTGGGGCGGCCTGATCGCCTGGGAAACCC
AGGCCAGCCGCGAGATCGCC

Downstream 100 bases:

>100_bases
GTGGTTGGAACCTGCCTGCTCCTCATCTTTTGCGCGGTTTTTAGTGCTTAATCTGCAAGAGACCGCGTATCCGATGAGCC
CCTGCCCCTTCAGGCCTGCC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MEQAKDLAHSMNEMTLAGLTGMMITGTVGQRDVFLDQIRELSAVRDLRVIRGDAVSKQFGPGSAGDKARPGDEIERAALR
DGKPHIAIESTPQLGEHLRVVYPALASANYLGKNCLACHQVADKTPLGVVSMRISLEKPYAAVDAFRTQSILFALFASLP
MLAVVYLFIRRFVTRPLREMSQGLAELAKGEGDLTRRLPERSQDEIGVTARLFNQMLGTVAGLVRQVSDSAEAVAQSSRR
LSDGAGQLAASSHRQNSQSQAAAEAVEQLAAHIGEIAGKAEHVSSGAEESLQRSEQGRQSLHRLQREVGQVESAVQLMAQ
AESDLVNSTAVITHMTKEVREIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAEKSARSASEIDAVTGSLNDKTD
AVRQAVSAGLQSLEASRHSTASVAEVLDAANQSVAEVRSGLRQIVEVTEQQRRSSQTVNANIDAIAGMARANDADIRETV
GAAEELEALAKRLTDSVSRFRV

Sequences:

>Translated_502_residues
MEQAKDLAHSMNEMTLAGLTGMMITGTVGQRDVFLDQIRELSAVRDLRVIRGDAVSKQFGPGSAGDKARPGDEIERAALR
DGKPHIAIESTPQLGEHLRVVYPALASANYLGKNCLACHQVADKTPLGVVSMRISLEKPYAAVDAFRTQSILFALFASLP
MLAVVYLFIRRFVTRPLREMSQGLAELAKGEGDLTRRLPERSQDEIGVTARLFNQMLGTVAGLVRQVSDSAEAVAQSSRR
LSDGAGQLAASSHRQNSQSQAAAEAVEQLAAHIGEIAGKAEHVSSGAEESLQRSEQGRQSLHRLQREVGQVESAVQLMAQ
AESDLVNSTAVITHMTKEVREIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAEKSARSASEIDAVTGSLNDKTD
AVRQAVSAGLQSLEASRHSTASVAEVLDAANQSVAEVRSGLRQIVEVTEQQRRSSQTVNANIDAIAGMARANDADIRETV
GAAEELEALAKRLTDSVSRFRV
>Mature_502_residues
MEQAKDLAHSMNEMTLAGLTGMMITGTVGQRDVFLDQIRELSAVRDLRVIRGDAVSKQFGPGSAGDKARPGDEIERAALR
DGKPHIAIESTPQLGEHLRVVYPALASANYLGKNCLACHQVADKTPLGVVSMRISLEKPYAAVDAFRTQSILFALFASLP
MLAVVYLFIRRFVTRPLREMSQGLAELAKGEGDLTRRLPERSQDEIGVTARLFNQMLGTVAGLVRQVSDSAEAVAQSSRR
LSDGAGQLAASSHRQNSQSQAAAEAVEQLAAHIGEIAGKAEHVSSGAEESLQRSEQGRQSLHRLQREVGQVESAVQLMAQ
AESDLVNSTAVITHMTKEVREIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAEKSARSASEIDAVTGSLNDKTD
AVRQAVSAGLQSLEASRHSTASVAEVLDAANQSVAEVRSGLRQIVEVTEQQRRSSQTVNANIDAIAGMARANDADIRETV
GAAEELEALAKRLTDSVSRFRV

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=355, Percent_Identity=30.9859154929577, Blast_Score=142, Evalue=7e-35,
Organism=Escherichia coli, GI1789453, Length=323, Percent_Identity=29.1021671826625, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI2367378, Length=240, Percent_Identity=32.0833333333333, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788195, Length=226, Percent_Identity=33.1858407079646, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1788194, Length=351, Percent_Identity=27.0655270655271, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007891
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF05227 CHASE3; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 53786; Mature: 53786

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQAKDLAHSMNEMTLAGLTGMMITGTVGQRDVFLDQIRELSAVRDLRVIRGDAVSKQFG
CCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
PGSAGDKARPGDEIERAALRDGKPHIAIESTPQLGEHLRVVYPALASANYLGKNCLACHQ
CCCCCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VADKTPLGVVSMRISLEKPYAAVDAFRTQSILFALFASLPMLAVVYLFIRRFVTRPLREM
HHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQGLAELAKGEGDLTRRLPERSQDEIGVTARLFNQMLGTVAGLVRQVSDSAEAVAQSSRR
HHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSDGAGQLAASSHRQNSQSQAAAEAVEQLAAHIGEIAGKAEHVSSGAEESLQRSEQGRQS
HHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHH
LHRLQREVGQVESAVQLMAQAESDLVNSTAVITHMTKEVREIAEQTNLLALNAAIEAARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
GEQGRGFAVVADEVRKLAEKSARSASEIDAVTGSLNDKTDAVRQAVSAGLQSLEASRHST
CCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASVAEVLDAANQSVAEVRSGLRQIVEVTEQQRRSSQTVNANIDAIAGMARANDADIRETV
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHH
GAAEELEALAKRLTDSVSRFRV
CCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEQAKDLAHSMNEMTLAGLTGMMITGTVGQRDVFLDQIRELSAVRDLRVIRGDAVSKQFG
CCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
PGSAGDKARPGDEIERAALRDGKPHIAIESTPQLGEHLRVVYPALASANYLGKNCLACHQ
CCCCCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VADKTPLGVVSMRISLEKPYAAVDAFRTQSILFALFASLPMLAVVYLFIRRFVTRPLREM
HHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQGLAELAKGEGDLTRRLPERSQDEIGVTARLFNQMLGTVAGLVRQVSDSAEAVAQSSRR
HHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSDGAGQLAASSHRQNSQSQAAAEAVEQLAAHIGEIAGKAEHVSSGAEESLQRSEQGRQS
HHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHH
LHRLQREVGQVESAVQLMAQAESDLVNSTAVITHMTKEVREIAEQTNLLALNAAIEAARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
GEQGRGFAVVADEVRKLAEKSARSASEIDAVTGSLNDKTDAVRQAVSAGLQSLEASRHST
CCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASVAEVLDAANQSVAEVRSGLRQIVEVTEQQRRSSQTVNANIDAIAGMARANDADIRETV
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHH
GAAEELEALAKRLTDSVSRFRV
CCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]