The gene/protein map for NC_005085 is currently unavailable.
Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is ycjY [H]

Identifier: 34498304

GI number: 34498304

Start: 3104724

End: 3105671

Strand: Direct

Name: ycjY [H]

Synonym: CV_2849

Alternate gene names: 34498304

Gene position: 3104724-3105671 (Clockwise)

Preceding gene: 34498303

Following gene: 34498307

Centisome position: 65.35

GC content: 69.51

Gene sequence:

>948_bases
TTGAACCTCGCAATCGAACAGAACGACGATATGAAACAGGAAGTGATTTTTCTCAGCGAAGACCTGGAACTGGTCGGCCA
TCTCTACCGCCCCGCCGATTACCAGCCACAGAAGCGCTACCCGGCCATCGTGGTCAGCCACCCGTTCACCGGCGTCAAGG
AACAAGTGGCCGGGCGCTACGCCGAGCGTCTGGCGCAGGCCGGCTATCTCGCGCTGGCGTTCGACACCGCCTACCAGGGC
GAGAGCGAGGGCCTGCCGCGCCATCTGGAAACGCCCCATTCGCGCGCCGAGGGGATCAAGTCGGCGGTCAGCTATCTGTC
CAACCTGCCCGATGTCGATCCGGAACGCATCGGCGCGCTGGGCATCGCCGCCGGCGGCGGCTACGCGGTGTTCGCCGCCC
GCACCGACACGCGCATCAAGGCCGTGGCCGCCGTCAACGCCGTCTGCCAGGGCAGCCTGCTGCGCGAAGGCCTGAACGGC
AGCCGCACGCCCGAACAGCTGCAAAGCCTGCTCGCCGCCGCTGCCGAAGACCGCACCGCCCAGGACCGCGGCGAAGCCGC
CGCCACCCGCAGCGCGCTGGCGGAAACGGCGCAGGCCGCGGCCGAACAGCCGCAGCGGCTGCTGCGCGAGGCCTACGACT
ACTACCGCACGCCGCGCGGCCGCCACCCCAACGCGGAAAACCGTTTCGTGGTGTCGGGCCTGGACGCGCTGGCCGGCTTC
GACGCCTTCGCCCGCATCGATATGCTGGCCCCGCGGCCGCTGCTGATGATAGCCGGGGCCGAGGCCGACACCCGCTACTT
CAGCGAGCGGGCCATCGCCGCCGCCGCGGAGCCTAAGGAGCTGTGCCTGATCGCCTGGGCCTCGCACTTCGACCTGTACG
ACCGCGAGCCCTGCGTGGCCGCCGCGGCGGCCAGGCTGAAAGTTTTCTTCGACCTTAGCCTGGCCTAG

Upstream 100 bases:

>100_bases
CCGGCAACGAATCGGCGCTGGCCGCCTCGGACGCGCAAGTGGCGCTGGACCAGGTCAATCTGTTCCTGGCGCTGGGCGGC
GGCTGGGAGCAGATCCCACG

Downstream 100 bases:

>100_bases
CCGGCCAGCAGCGGCTCGGCCTCGTTGGCCGCGACCGGCGCTTCCCACAGCGCGGGCAGGCCGTGGCTGGCGCGCGCCTT
CAGGCACTGCGCCGAACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MNLAIEQNDDMKQEVIFLSEDLELVGHLYRPADYQPQKRYPAIVVSHPFTGVKEQVAGRYAERLAQAGYLALAFDTAYQG
ESEGLPRHLETPHSRAEGIKSAVSYLSNLPDVDPERIGALGIAAGGGYAVFAARTDTRIKAVAAVNAVCQGSLLREGLNG
SRTPEQLQSLLAAAAEDRTAQDRGEAAATRSALAETAQAAAEQPQRLLREAYDYYRTPRGRHPNAENRFVVSGLDALAGF
DAFARIDMLAPRPLLMIAGAEADTRYFSERAIAAAAEPKELCLIAWASHFDLYDREPCVAAAAARLKVFFDLSLA

Sequences:

>Translated_315_residues
MNLAIEQNDDMKQEVIFLSEDLELVGHLYRPADYQPQKRYPAIVVSHPFTGVKEQVAGRYAERLAQAGYLALAFDTAYQG
ESEGLPRHLETPHSRAEGIKSAVSYLSNLPDVDPERIGALGIAAGGGYAVFAARTDTRIKAVAAVNAVCQGSLLREGLNG
SRTPEQLQSLLAAAAEDRTAQDRGEAAATRSALAETAQAAAEQPQRLLREAYDYYRTPRGRHPNAENRFVVSGLDALAGF
DAFARIDMLAPRPLLMIAGAEADTRYFSERAIAAAAEPKELCLIAWASHFDLYDREPCVAAAAARLKVFFDLSLA
>Mature_315_residues
MNLAIEQNDDMKQEVIFLSEDLELVGHLYRPADYQPQKRYPAIVVSHPFTGVKEQVAGRYAERLAQAGYLALAFDTAYQG
ESEGLPRHLETPHSRAEGIKSAVSYLSNLPDVDPERIGALGIAAGGGYAVFAARTDTRIKAVAAVNAVCQGSLLREGLNG
SRTPEQLQSLLAAAAEDRTAQDRGEAAATRSALAETAQAAAEQPQRLLREAYDYYRTPRGRHPNAENRFVVSGLDALAGF
DAFARIDMLAPRPLLMIAGAEADTRYFSERAIAAAAEPKELCLIAWASHFDLYDREPCVAAAAARLKVFFDLSLA

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI221142683, Length=309, Percent_Identity=36.2459546925566, Blast_Score=194, Evalue=5e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 34195; Mature: 34195

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLAIEQNDDMKQEVIFLSEDLELVGHLYRPADYQPQKRYPAIVVSHPFTGVKEQVAGRY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH
AERLAQAGYLALAFDTAYQGESEGLPRHLETPHSRAEGIKSAVSYLSNLPDVDPERIGAL
HHHHHHCCEEEEEEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCEE
GIAAGGGYAVFAARTDTRIKAVAAVNAVCQGSLLREGLNGSRTPEQLQSLLAAAAEDRTA
EEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCH
QDRGEAAATRSALAETAQAAAEQPQRLLREAYDYYRTPRGRHPNAENRFVVSGLDALAGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHH
DAFARIDMLAPRPLLMIAGAEADTRYFSERAIAAAAEPKELCLIAWASHFDLYDREPCVA
HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHEEEEEEHHHCCCCCCCHHHH
AAAARLKVFFDLSLA
HHHHHHEEEEEEECC
>Mature Secondary Structure
MNLAIEQNDDMKQEVIFLSEDLELVGHLYRPADYQPQKRYPAIVVSHPFTGVKEQVAGRY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH
AERLAQAGYLALAFDTAYQGESEGLPRHLETPHSRAEGIKSAVSYLSNLPDVDPERIGAL
HHHHHHCCEEEEEEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCEE
GIAAGGGYAVFAARTDTRIKAVAAVNAVCQGSLLREGLNGSRTPEQLQSLLAAAAEDRTA
EEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCH
QDRGEAAATRSALAETAQAAAEQPQRLLREAYDYYRTPRGRHPNAENRFVVSGLDALAGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHH
DAFARIDMLAPRPLLMIAGAEADTRYFSERAIAAAAEPKELCLIAWASHFDLYDREPCVA
HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHEEEEEEHHHCCCCCCCHHHH
AAAARLKVFFDLSLA
HHHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]