| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is aaeA [H]
Identifier: 34498302
GI number: 34498302
Start: 3102434
End: 3103309
Strand: Direct
Name: aaeA [H]
Synonym: CV_2847
Alternate gene names: 34498302
Gene position: 3102434-3103309 (Clockwise)
Preceding gene: 34498301
Following gene: 34498303
Centisome position: 65.3
GC content: 69.29
Gene sequence:
>876_bases ATGAACAACCGCATTCGCAAAGCCGGGTCCGTGCTGCTGACCCTGGCCACCGTCGCCGTCGCCATCGTGGTGGTGCGGCA TATCTGGATCTACTACACCGACGCGCCATGGACCCGCGACGGCCATATCGCCGCCGACGTGGTGCAGGTGGCGCCGGACG TGTCCGGGCTGATCACCGAAGTGAAAGTCTCGGACAACCAGCTGGTCAAGAAAGGCCAGGTGTTGTTCGTGGTGGACCGC GCGCATTACGAACTGGCGCTGCGCCAGGCCGAAGCCGCCCTCGCCGCGCAGCGCGCCACGCTGGCCCAAGCCCGCCGCGA GGCCGCGCGCAACCACTCGCTGACCGACCTGGTAGCCGCCGAGGCCCGCGAGGAAGGCGACGCCAAGGTGCAGTTGGGCG AGGCCACCCTGGCCGCCGCCGAGGCCGCCGTCGGCCTGGCCCGGCTGAACCTGGAGCGCACCACGATCAAAAGCCCGGTG GACGGCTATCTGAACGACCGCACCCCGCGCGCCGGCGACTACGCCGCCAGCGGCCGCGCGGTGCTGTCCATCGTCGACTC CCATTCCTTCCACGTGGACGGCTACTTCGAGGAAACCAAGCTGGGCGGCGTGGAGCTCAACCAGCCGGTGGACATCCGGA TCATGGGCGAATCGCGCAAGCTGCGCGGCCACGTGCAGAGCATCGCCGCCGGCATCGAAAACCGCGACCGCAGCAACGGC GCCTCGCTGCTGCCCAACGTCAACCCCACCTTCAACTGGGTGCGGCTGGCGCAGCGCATCCCGGTCCGGATCGCGCTGGA CGAAGTGCCGGCCAATTTCCGGCTGATCGCCGGCCGCACCGCCACCGTGTCGGTGCGCCAGGGAGGCCGTTCATGA
Upstream 100 bases:
>100_bases CTGGGCCTGTACCGCGCGGTGTGGCACCGCTCCCTCTTCAATTTCGCGCTTTACCTGATCGTGCTGGGCGCCACGATCGC GCTGTTTCACAGGTGACATC
Downstream 100 bases:
>100_bases AAGCCGCGCGCAAGCTGAGCGCGCTGGTCCTGGCCGGCGCGCTGGCCGGCTGCGCCGCCGTCGGTCCGGATTACCATCTG CCATCGCAGGCCGCGCTGGG
Product: fusaric acid resistance protein FusE II
Products: NA
Alternate protein names: pHBA efflux pump protein A [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MNNRIRKAGSVLLTLATVAVAIVVVRHIWIYYTDAPWTRDGHIAADVVQVAPDVSGLITEVKVSDNQLVKKGQVLFVVDR AHYELALRQAEAALAAQRATLAQARREAARNHSLTDLVAAEAREEGDAKVQLGEATLAAAEAAVGLARLNLERTTIKSPV DGYLNDRTPRAGDYAASGRAVLSIVDSHSFHVDGYFEETKLGGVELNQPVDIRIMGESRKLRGHVQSIAAGIENRDRSNG ASLLPNVNPTFNWVRLAQRIPVRIALDEVPANFRLIAGRTATVSVRQGGRS
Sequences:
>Translated_291_residues MNNRIRKAGSVLLTLATVAVAIVVVRHIWIYYTDAPWTRDGHIAADVVQVAPDVSGLITEVKVSDNQLVKKGQVLFVVDR AHYELALRQAEAALAAQRATLAQARREAARNHSLTDLVAAEAREEGDAKVQLGEATLAAAEAAVGLARLNLERTTIKSPV DGYLNDRTPRAGDYAASGRAVLSIVDSHSFHVDGYFEETKLGGVELNQPVDIRIMGESRKLRGHVQSIAAGIENRDRSNG ASLLPNVNPTFNWVRLAQRIPVRIALDEVPANFRLIAGRTATVSVRQGGRS >Mature_291_residues MNNRIRKAGSVLLTLATVAVAIVVVRHIWIYYTDAPWTRDGHIAADVVQVAPDVSGLITEVKVSDNQLVKKGQVLFVVDR AHYELALRQAEAALAAQRATLAQARREAARNHSLTDLVAAEAREEGDAKVQLGEATLAAAEAAVGLARLNLERTTIKSPV DGYLNDRTPRAGDYAASGRAVLSIVDSHSFHVDGYFEETKLGGVELNQPVDIRIMGESRKLRGHVQSIAAGIENRDRSNG ASLLPNVNPTFNWVRLAQRIPVRIALDEVPANFRLIAGRTATVSVRQGGRS
Specific function: Unknown
COG id: COG1566
COG function: function code V; Multidrug resistance efflux pump
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI87081951, Length=277, Percent_Identity=40.7942238267148, Blast_Score=228, Evalue=3e-61, Organism=Escherichia coli, GI1789637, Length=288, Percent_Identity=42.0138888888889, Blast_Score=217, Evalue=6e-58, Organism=Escherichia coli, GI1790519, Length=312, Percent_Identity=32.0512820512821, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1789041, Length=304, Percent_Identity=27.3026315789474, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1788711, Length=306, Percent_Identity=27.7777777777778, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI87082036, Length=155, Percent_Identity=34.1935483870968, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022871 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 31532; Mature: 31532
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNRIRKAGSVLLTLATVAVAIVVVRHIWIYYTDAPWTRDGHIAADVVQVAPDVSGLITE CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHCCCCCHHEEE VKVSDNQLVKKGQVLFVVDRAHYELALRQAEAALAAQRATLAQARREAARNHSLTDLVAA EEECCCHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH EAREEGDAKVQLGEATLAAAEAAVGLARLNLERTTIKSPVDGYLNDRTPRAGDYAASGRA HHHCCCCCEEEECHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCE VLSIVDSHSFHVDGYFEETKLGGVELNQPVDIRIMGESRKLRGHVQSIAAGIENRDRSNG EEEEECCCCEEECCEEECCCCCCEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCC ASLLPNVNPTFNWVRLAQRIPVRIALDEVPANFRLIAGRTATVSVRQGGRS CCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCEEEEECCEEEEEECCCCCC >Mature Secondary Structure MNNRIRKAGSVLLTLATVAVAIVVVRHIWIYYTDAPWTRDGHIAADVVQVAPDVSGLITE CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHCCCCCHHEEE VKVSDNQLVKKGQVLFVVDRAHYELALRQAEAALAAQRATLAQARREAARNHSLTDLVAA EEECCCHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH EAREEGDAKVQLGEATLAAAEAAVGLARLNLERTTIKSPVDGYLNDRTPRAGDYAASGRA HHHCCCCCEEEECHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCE VLSIVDSHSFHVDGYFEETKLGGVELNQPVDIRIMGESRKLRGHVQSIAAGIENRDRSNG EEEEECCCCEEECCEEECCCCCCEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCC ASLLPNVNPTFNWVRLAQRIPVRIALDEVPANFRLIAGRTATVSVRQGGRS CCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCEEEEECCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA