| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498120
Identifier: 34498120
GI number: 34498120
Start: 2879427
End: 2880008
Strand: Direct
Name: 34498120
Synonym: CV_2665
Alternate gene names: NA
Gene position: 2879427-2880008 (Clockwise)
Preceding gene: 34498119
Following gene: 34498121
Centisome position: 60.61
GC content: 49.48
Gene sequence:
>582_bases ATGGCCCCCAAACCGAAAAAGAAAATTCACTCCCATAAGGACAAGCTGACACCCAAGTCCGTCACCGCACCGCAAAAGGT TGAAGTAGACGATACCGCCCGACTGAAGGAAATCCGCAGTTTGGTAGAGAAGAATAATCAGTCATCCTTGCCTACCGATC TGATCATCTGCCAGATTTACATGGAGTCGCGCTTCGACTCCAACCCGCACAATAGCGATAGCTCCGCCAAAGGATTGATG CAGCTGCTCAAAGCGCCCATCCGCGAAATGTACCGGATCGAGAACATGCAAAAGCCGAGAAGCGAGAGGCTGACAGACGA AGAAGCTTTCAAGAAAGCGGATGTCTTTCATGACAGCCCCTCCCTGCTGAACGATGCCATCAACATTCAGACCGGGACCA AGTATTTGCAGATGCTGATTGATAAACAGAAAAAGAAAGGCGCTAGCGATCCGATATCAGAAGCGTACAAGGACTACCGT GGGCTTCGAAACGGCATCTACTACAGAAAAATCAAGGCAATGGCCGACAAGCTGAAGGACAATCCAGAATCCATGCAAAT ACTGAGAGACGGCGTCAAATGA
Upstream 100 bases:
>100_bases GGCAAGACATCCAAGGTTTCCTCCGACGCGGCCGACTCCGTCACATTGCACGTATACGAACCAGAACCCACGCCGATCAA TCCGCATTGGGATCAATGAG
Downstream 100 bases:
>100_bases AATATCTTTTATTATCAATCGCAGCGCTTTCACTGAGCGCAAATGCTGAAACCGTGCAAAGCTGCCGTCTCTCCGCCCAA AACACCATCACCATTAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MAPKPKKKIHSHKDKLTPKSVTAPQKVEVDDTARLKEIRSLVEKNNQSSLPTDLIICQIYMESRFDSNPHNSDSSAKGLM QLLKAPIREMYRIENMQKPRSERLTDEEAFKKADVFHDSPSLLNDAINIQTGTKYLQMLIDKQKKKGASDPISEAYKDYR GLRNGIYYRKIKAMADKLKDNPESMQILRDGVK
Sequences:
>Translated_193_residues MAPKPKKKIHSHKDKLTPKSVTAPQKVEVDDTARLKEIRSLVEKNNQSSLPTDLIICQIYMESRFDSNPHNSDSSAKGLM QLLKAPIREMYRIENMQKPRSERLTDEEAFKKADVFHDSPSLLNDAINIQTGTKYLQMLIDKQKKKGASDPISEAYKDYR GLRNGIYYRKIKAMADKLKDNPESMQILRDGVK >Mature_192_residues APKPKKKIHSHKDKLTPKSVTAPQKVEVDDTARLKEIRSLVEKNNQSSLPTDLIICQIYMESRFDSNPHNSDSSAKGLMQ LLKAPIREMYRIENMQKPRSERLTDEEAFKKADVFHDSPSLLNDAINIQTGTKYLQMLIDKQKKKGASDPISEAYKDYRG LRNGIYYRKIKAMADKLKDNPESMQILRDGVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22150; Mature: 22019
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPKPKKKIHSHKDKLTPKSVTAPQKVEVDDTARLKEIRSLVEKNNQSSLPTDLIICQIY CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH MESRFDSNPHNSDSSAKGLMQLLKAPIREMYRIENMQKPRSERLTDEEAFKKADVFHDSP HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCH SLLNDAINIQTGTKYLQMLIDKQKKKGASDPISEAYKDYRGLRNGIYYRKIKAMADKLKD HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPESMQILRDGVK CHHHHHHHHHCCC >Mature Secondary Structure APKPKKKIHSHKDKLTPKSVTAPQKVEVDDTARLKEIRSLVEKNNQSSLPTDLIICQIY CCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH MESRFDSNPHNSDSSAKGLMQLLKAPIREMYRIENMQKPRSERLTDEEAFKKADVFHDSP HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCH SLLNDAINIQTGTKYLQMLIDKQKKKGASDPISEAYKDYRGLRNGIYYRKIKAMADKLKD HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPESMQILRDGVK CHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA