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The map label for this gene is yddE [C]

Identifier: 34498118

GI number: 34498118

Start: 2877335

End: 2878168

Strand: Direct

Name: yddE [C]

Synonym: CV_2663

Alternate gene names: 34498118

Gene position: 2877335-2878168 (Clockwise)

Preceding gene: 34498106

Following gene: 34498119

Centisome position: 60.56

GC content: 64.87

Gene sequence:

>834_bases
ATGAACTTCAAGCAGGTCGATGTCTTCAGTTCCACCCCTCTTAAGGGCAACCCGGTGGCCGTAGTGTTCGATGCTGATGG
GCTCGATGACCGGCAGATGGCGCTCTTTGCCAACTGGACCAATCTCAGCGAAACCACCTTCATCCTCCAGCCCAGAGACC
CGCGCGCCGACTACCGCCTGAGGATCTTCACAACGCTGGAAGAACTGCCGTTCGCTGGCCATCCCACCCTGGGCAGCTGC
CACGCCTGGTTGGAGTCCGGCGGGATGCCGCAGGGCGAGGATGTCATCCAGGAGTGCGAGGTGGGACTGGTGCGGATTCG
CCGCCAGGAGGGGCGGCTGGCGTTTCTTGCGCCGCCCTTGCTGCGCTCCGGGCCAGTGGCGGCCGAGCTTCTGGAGCGGG
TGCGCCTGGGACTGCGCTTGGCGCCTGGTGAGATTGTAGATGCCCAGTGGGTCGACAACGGCGCCGGTTGGCTGGCCGTG
ATGCTCGCCAAGCGCCAGCAGGTACTGGACCTCCAACCCGACTATCCGGCGTTAAGCGGGCTGGCGGTGGGGGTGATTGC
GCCTTGCGATCCACAGCATGACGATAGCGATGCGCAGTTCGAGGTGAGGGCCTTTATCGCCGGCGATGGCATGCCCGAGG
ACCCAGCCACGGGCAGCCTGAACGCCGGCATTGCCCAGTGGTTGCTGGCGGCCGGAATGGTGCCAGCGCGCTATCGCGTC
AGCCAGGGCTTGAGCATGGGGCGCGCCGGGCGCATCGAGGTAGAACAGGTGGGCGACGATGTGTGGATAGGCGGCAATGC
CGTAACCTGCATTGCAGGCCGTCTGACGCTATAA

Upstream 100 bases:

>100_bases
GCAATGGGAAATCGAAGACAAATATGATTTCCATTTACAGCGGCACATCGGAAATTGCGCGTAGACTAGCGCTCCTACCC
GTGCACGAACAGAACATTCC

Downstream 100 bases:

>100_bases
CCACCCAAGTTCGAAATGGTTTGAGTGGCCACGCCGGTTTCCAGCCGGCAAACCACCTCCCCGCCCCCCAGCGGCATGGC
GCGGACCTCCTCCTTGTTCA

Product: phenazine biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MNFKQVDVFSSTPLKGNPVAVVFDADGLDDRQMALFANWTNLSETTFILQPRDPRADYRLRIFTTLEELPFAGHPTLGSC
HAWLESGGMPQGEDVIQECEVGLVRIRRQEGRLAFLAPPLLRSGPVAAELLERVRLGLRLAPGEIVDAQWVDNGAGWLAV
MLAKRQQVLDLQPDYPALSGLAVGVIAPCDPQHDDSDAQFEVRAFIAGDGMPEDPATGSLNAGIAQWLLAAGMVPARYRV
SQGLSMGRAGRIEVEQVGDDVWIGGNAVTCIAGRLTL

Sequences:

>Translated_277_residues
MNFKQVDVFSSTPLKGNPVAVVFDADGLDDRQMALFANWTNLSETTFILQPRDPRADYRLRIFTTLEELPFAGHPTLGSC
HAWLESGGMPQGEDVIQECEVGLVRIRRQEGRLAFLAPPLLRSGPVAAELLERVRLGLRLAPGEIVDAQWVDNGAGWLAV
MLAKRQQVLDLQPDYPALSGLAVGVIAPCDPQHDDSDAQFEVRAFIAGDGMPEDPATGSLNAGIAQWLLAAGMVPARYRV
SQGLSMGRAGRIEVEQVGDDVWIGGNAVTCIAGRLTL
>Mature_277_residues
MNFKQVDVFSSTPLKGNPVAVVFDADGLDDRQMALFANWTNLSETTFILQPRDPRADYRLRIFTTLEELPFAGHPTLGSC
HAWLESGGMPQGEDVIQECEVGLVRIRRQEGRLAFLAPPLLRSGPVAAELLERVRLGLRLAPGEIVDAQWVDNGAGWLAV
MLAKRQQVLDLQPDYPALSGLAVGVIAPCDPQHDDSDAQFEVRAFIAGDGMPEDPATGSLNAGIAQWLLAAGMVPARYRV
SQGLSMGRAGRIEVEQVGDDVWIGGNAVTCIAGRLTL

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Escherichia coli, GI1787737, Length=295, Percent_Identity=30.1694915254237, Blast_Score=95, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6321818, Length=297, Percent_Identity=30.976430976431, Blast_Score=159, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 29971; Mature: 29971

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKQVDVFSSTPLKGNPVAVVFDADGLDDRQMALFANWTNLSETTFILQPRDPRADYRL
CCCEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCEEE
RIFTTLEELPFAGHPTLGSCHAWLESGGMPQGEDVIQECEVGLVRIRRQEGRLAFLAPPL
EEEEEHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCCCEEEECCCH
LRSGPVAAELLERVRLGLRLAPGEIVDAQWVDNGAGWLAVMLAKRQQVLDLQPDYPALSG
HCCCCHHHHHHHHHHHCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC
LAVGVIAPCDPQHDDSDAQFEVRAFIAGDGMPEDPATGSLNAGIAQWLLAAGMVPARYRV
EEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHH
SQGLSMGRAGRIEVEQVGDDVWIGGNAVTCIAGRLTL
HCCCCCCCCCCEEHHHCCCEEEECCCEEEEEEEEECC
>Mature Secondary Structure
MNFKQVDVFSSTPLKGNPVAVVFDADGLDDRQMALFANWTNLSETTFILQPRDPRADYRL
CCCEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCEEE
RIFTTLEELPFAGHPTLGSCHAWLESGGMPQGEDVIQECEVGLVRIRRQEGRLAFLAPPL
EEEEEHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCCCEEEECCCH
LRSGPVAAELLERVRLGLRLAPGEIVDAQWVDNGAGWLAVMLAKRQQVLDLQPDYPALSG
HCCCCHHHHHHHHHHHCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC
LAVGVIAPCDPQHDDSDAQFEVRAFIAGDGMPEDPATGSLNAGIAQWLLAAGMVPARYRV
EEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHH
SQGLSMGRAGRIEVEQVGDDVWIGGNAVTCIAGRLTL
HCCCCCCCCCCEEHHHCCCEEEECCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]