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The map label for this gene is pscQ

Identifier: 34498061

GI number: 34498061

Start: 2815513

End: 2816385

Strand: Direct

Name: pscQ

Synonym: CV_2606

Alternate gene names: NA

Gene position: 2815513-2816385 (Clockwise)

Preceding gene: 34498060

Following gene: 34498062

Centisome position: 59.26

GC content: 62.89

Gene sequence:

>873_bases
CTGTCCTTCAACCACCGCGAGGCTGGCCCAGGACTGAGCCTGATCGCCCAGTTGGATGACCAGCCGGTAAGGCTATGGAT
GGCTGAGGCCCAATGGCTGCAATGGGTAGAGCCCATGCTGTCCCTCCCCTCCTGGGACATGGCCCCGCCCGATTTGCGCG
AATTGCTCGCCGTCTGGACCCTTGCCGACGCAGGCAGCGGCCTGGACGACCTGGGTCTGCCTTGGCCGCAGGCCACGCGC
TTGGAACCGGAACCCATCGATGCGGGCATGGGTTGGCGGCTGAGGATTCTGCGGGATGAGCGACAGCTTGATCTATTGGT
GCGGGACGCCCCCCAGTCCTGGCTGGACGCCGTTGCCGAACAGGCCTATCCAATAGAAATGGATGAAACGGAGACGGCCA
TTACAGCAGGCGTTTCGCTGATCGCGGGCTGGAGCATGGTGGAAATGGCCTCCGTTCGCAAGCTGGTCGTCGGCGATGCG
CTGCTGCTGCGCTACAGCTTCGACGTTGCGGCCGGGAAATTCGGACTATTCAATCGACAGCCGATCGCCAGCCTGATGCA
GGACGGCGAAACCGGTATTTTCACCGTGGAGACTCTGATGAGCGATTTTGAAGACTGGATGGATATCACCCCGACCCTCA
GCCCAGCGGAAGAGCAGGCCCTGGGCGACGCCATGATCACCGTCACCGTGGAAGTGGCGAAGATGGAACTCCCCTTGCAC
CAGCTGGGCAACCTCCAACCCGGCACCCTACTCTCCAGCGCGGTCAGCAGCGACGGCCTGGTCACGTTGAAGGCCGGCAG
CCGTCCTATTGCCCGCGGCACCTTGCTGGACATCGACTCTCGCCTGGCGGTACGGATCGAGCACCTGTGCTGA

Upstream 100 bases:

>100_bases
GTGATAGATGCCAATTCCCCGCTTAAGTAAGGAAACCGGCCTGCTGTTGAGCAAGGTCGGCCATGGCCGGCGGCTGGATT
CCGCCGACGGCAGCCTGATC

Downstream 100 bases:

>100_bases
GACGGTTCAGGTATCTACCCGATGGGAGGCTGGCGAACACAATTGAATAATGAGGATATTCAATGTTACGCCGGTTTTCC
CCATGTCCTTACTAGACCAA

Product: translocation protein in type III secretion

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSFNHREAGPGLSLIAQLDDQPVRLWMAEAQWLQWVEPMLSLPSWDMAPPDLRELLAVWTLADAGSGLDDLGLPWPQATR
LEPEPIDAGMGWRLRILRDERQLDLLVRDAPQSWLDAVAEQAYPIEMDETETAITAGVSLIAGWSMVEMASVRKLVVGDA
LLLRYSFDVAAGKFGLFNRQPIASLMQDGETGIFTVETLMSDFEDWMDITPTLSPAEEQALGDAMITVTVEVAKMELPLH
QLGNLQPGTLLSSAVSSDGLVTLKAGSRPIARGTLLDIDSRLAVRIEHLC

Sequences:

>Translated_290_residues
MSFNHREAGPGLSLIAQLDDQPVRLWMAEAQWLQWVEPMLSLPSWDMAPPDLRELLAVWTLADAGSGLDDLGLPWPQATR
LEPEPIDAGMGWRLRILRDERQLDLLVRDAPQSWLDAVAEQAYPIEMDETETAITAGVSLIAGWSMVEMASVRKLVVGDA
LLLRYSFDVAAGKFGLFNRQPIASLMQDGETGIFTVETLMSDFEDWMDITPTLSPAEEQALGDAMITVTVEVAKMELPLH
QLGNLQPGTLLSSAVSSDGLVTLKAGSRPIARGTLLDIDSRLAVRIEHLC
>Mature_289_residues
SFNHREAGPGLSLIAQLDDQPVRLWMAEAQWLQWVEPMLSLPSWDMAPPDLRELLAVWTLADAGSGLDDLGLPWPQATRL
EPEPIDAGMGWRLRILRDERQLDLLVRDAPQSWLDAVAEQAYPIEMDETETAITAGVSLIAGWSMVEMASVRKLVVGDAL
LLRYSFDVAAGKFGLFNRQPIASLMQDGETGIFTVETLMSDFEDWMDITPTLSPAEEQALGDAMITVTVEVAKMELPLHQ
LGNLQPGTLLSSAVSSDGLVTLKAGSRPIARGTLLDIDSRLAVRIEHLC

Specific function: Unknown

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31873; Mature: 31742

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNHREAGPGLSLIAQLDDQPVRLWMAEAQWLQWVEPMLSLPSWDMAPPDLRELLAVWT
CCCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LADAGSGLDDLGLPWPQATRLEPEPIDAGMGWRLRILRDERQLDLLVRDAPQSWLDAVAE
HHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCHHHHHHHHH
QAYPIEMDETETAITAGVSLIAGWSMVEMASVRKLVVGDALLLRYSFDVAAGKFGLFNRQ
CCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCC
PIASLMQDGETGIFTVETLMSDFEDWMDITPTLSPAEEQALGDAMITVTVEVAKMELPLH
HHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEEHHCCCHH
QLGNLQPGTLLSSAVSSDGLVTLKAGSRPIARGTLLDIDSRLAVRIEHLC
HHCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHCC
>Mature Secondary Structure 
SFNHREAGPGLSLIAQLDDQPVRLWMAEAQWLQWVEPMLSLPSWDMAPPDLRELLAVWT
CCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LADAGSGLDDLGLPWPQATRLEPEPIDAGMGWRLRILRDERQLDLLVRDAPQSWLDAVAE
HHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCHHHHHHHHH
QAYPIEMDETETAITAGVSLIAGWSMVEMASVRKLVVGDALLLRYSFDVAAGKFGLFNRQ
CCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCC
PIASLMQDGETGIFTVETLMSDFEDWMDITPTLSPAEEQALGDAMITVTVEVAKMELPLH
HHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEEHHCCCHH
QLGNLQPGTLLSSAVSSDGLVTLKAGSRPIARGTLLDIDSRLAVRIEHLC
HHCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA