| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497939
Identifier: 34497939
GI number: 34497939
Start: 2673909
End: 2674964
Strand: Direct
Name: 34497939
Synonym: CV_2484
Alternate gene names: NA
Gene position: 2673909-2674964 (Clockwise)
Preceding gene: 34497938
Following gene: 34497943
Centisome position: 56.28
GC content: 68.18
Gene sequence:
>1056_bases ATGAATGCGCCCCCCAATCGCCTGAATGGCCTGGATCTGGCCCGCTGCCTGGCCTTGATCGGCATGGTGATGGTGAACTT CCGCCTGGCGATCGCGCCCTTCCCATCGGCGCAGGACCCTCTGCTGGCATGGCTATCGCCGCTGGAGGGACGGTCGGCCG CCATCTTCGTCACGCTGGCCGGCATAGGGCTGGGCCTGGCGACCGCACGCCTCGCGCGCGACCAGGCCGTCGCCCAGACC TGCCGGCGCGCGATGTTCCTGCTCGCCGTCGGCCTGCTCAACTTCACGCTGTTTCCGGCCGACATCATCCACTATTACGC CTTCTATTTTCTCGCGGCCTGCCTGCTGCTGCCGCTATCCGGCCGCCTGTTGCTGGCCGCTCTCGGCTTGACGCTATCGT CGGCTTTCGCGCTGCAATTGACGCTGGATTACAGCCGGGGATGGAACTGGGGCGAATTGAGCTATGTCGACTTCTGGACG CCGATCGGCTTCGTCCGCAACCTGCTGTTCAACGGCTGGCATCCGATGCTGCCGTGGCTGGGTTTCGCGATCTGGGGCTT GTGGCTGTCCCGGCAGCCGCTGGCCCGTCCCAAGACGCAATGGGCGCTGATCGCAGGGGGCAGCCTACTCGCCTTGGCCA GCGGGCTACTGTCGGCTTGGCTACGGGACCTGACGCCTGCGCCACTCTCGGCGTTCCTCGGCACCAAGCCGCTGCCGCCG GGGCCGCTGTACATGCTGAACGCCGGCGGCATCGCCAGCGCGGCGATAGGCGGTTGCCTGCTGCTGGCGGCCCGGCCGCG ACTGGCGGCGCGGCTCTCCCCGTTGCTGGCCGCCGGACGTCAGACGCTGACGCTGTACATCGCCCACATCCTGATCGGCA TGGGCGTACTGGAAGAAATGGGATGGCTCGACAGCGGTGAACTCGCGCGCGCGCCGCTCGCCGCGGCGCTGTACTGCATC GCCGCCGCGGCCTTCGCCTGGCTATGGTCGCGGCGCTTCCGCCACGGCCCGCTGGAGTCGCTGATGCGGCGCATCTGCGA CCGGCAAGGCTCTTGA
Upstream 100 bases:
>100_bases AGGGATGCGCGATCAACCGGACCCTGCTGGGCGCGCACCTGGAAACCGCTGACATCTTGACCTTGATCGACAAACTCTTA TCCACGGCAGGAGGAACAAG
Downstream 100 bases:
>100_bases TACCCGCCGGCCAAAACGGGACTGGCGCCGCGACGAGGGGATGATCCCGGCTGGACAGGCGTCCAGCCGGACAGGAGCTC AGTCCCGAAAGCTGACCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MNAPPNRLNGLDLARCLALIGMVMVNFRLAIAPFPSAQDPLLAWLSPLEGRSAAIFVTLAGIGLGLATARLARDQAVAQT CRRAMFLLAVGLLNFTLFPADIIHYYAFYFLAACLLLPLSGRLLLAALGLTLSSAFALQLTLDYSRGWNWGELSYVDFWT PIGFVRNLLFNGWHPMLPWLGFAIWGLWLSRQPLARPKTQWALIAGGSLLALASGLLSAWLRDLTPAPLSAFLGTKPLPP GPLYMLNAGGIASAAIGGCLLLAARPRLAARLSPLLAAGRQTLTLYIAHILIGMGVLEEMGWLDSGELARAPLAAALYCI AAAAFAWLWSRRFRHGPLESLMRRICDRQGS
Sequences:
>Translated_351_residues MNAPPNRLNGLDLARCLALIGMVMVNFRLAIAPFPSAQDPLLAWLSPLEGRSAAIFVTLAGIGLGLATARLARDQAVAQT CRRAMFLLAVGLLNFTLFPADIIHYYAFYFLAACLLLPLSGRLLLAALGLTLSSAFALQLTLDYSRGWNWGELSYVDFWT PIGFVRNLLFNGWHPMLPWLGFAIWGLWLSRQPLARPKTQWALIAGGSLLALASGLLSAWLRDLTPAPLSAFLGTKPLPP GPLYMLNAGGIASAAIGGCLLLAARPRLAARLSPLLAAGRQTLTLYIAHILIGMGVLEEMGWLDSGELARAPLAAALYCI AAAAFAWLWSRRFRHGPLESLMRRICDRQGS >Mature_351_residues MNAPPNRLNGLDLARCLALIGMVMVNFRLAIAPFPSAQDPLLAWLSPLEGRSAAIFVTLAGIGLGLATARLARDQAVAQT CRRAMFLLAVGLLNFTLFPADIIHYYAFYFLAACLLLPLSGRLLLAALGLTLSSAFALQLTLDYSRGWNWGELSYVDFWT PIGFVRNLLFNGWHPMLPWLGFAIWGLWLSRQPLARPKTQWALIAGGSLLALASGLLSAWLRDLTPAPLSAFLGTKPLPP GPLYMLNAGGIASAAIGGCLLLAARPRLAARLSPLLAAGRQTLTLYIAHILIGMGVLEEMGWLDSGELARAPLAAALYCI AAAAFAWLWSRRFRHGPLESLMRRICDRQGS
Specific function: Unknown
COG id: COG2311
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38002; Mature: 38002
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPPNRLNGLDLARCLALIGMVMVNFRLAIAPFPSAQDPLLAWLSPLEGRSAAIFVTLA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHCCCCCCCEEEEEEHH GIGLGLATARLARDQAVAQTCRRAMFLLAVGLLNFTLFPADIIHYYAFYFLAACLLLPLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GRLLLAALGLTLSSAFALQLTLDYSRGWNWGELSYVDFWTPIGFVRNLLFNGWHPMLPWL CHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH GFAIWGLWLSRQPLARPKTQWALIAGGSLLALASGLLSAWLRDLTPAPLSAFLGTKPLPP HHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC GPLYMLNAGGIASAAIGGCLLLAARPRLAARLSPLLAAGRQTLTLYIAHILIGMGVLEEM CCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH GWLDSGELARAPLAAALYCIAAAAFAWLWSRRFRHGPLESLMRRICDRQGS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MNAPPNRLNGLDLARCLALIGMVMVNFRLAIAPFPSAQDPLLAWLSPLEGRSAAIFVTLA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHCCCCCCCEEEEEEHH GIGLGLATARLARDQAVAQTCRRAMFLLAVGLLNFTLFPADIIHYYAFYFLAACLLLPLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GRLLLAALGLTLSSAFALQLTLDYSRGWNWGELSYVDFWTPIGFVRNLLFNGWHPMLPWL CHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH GFAIWGLWLSRQPLARPKTQWALIAGGSLLALASGLLSAWLRDLTPAPLSAFLGTKPLPP HHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC GPLYMLNAGGIASAAIGGCLLLAARPRLAARLSPLLAAGRQTLTLYIAHILIGMGVLEEM CCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH GWLDSGELARAPLAAALYCIAAAAFAWLWSRRFRHGPLESLMRRICDRQGS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA