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The map label for this gene is yebA [C]

Identifier: 34497932

GI number: 34497932

Start: 2665455

End: 2666789

Strand: Direct

Name: yebA [C]

Synonym: CV_2477

Alternate gene names: 34497932

Gene position: 2665455-2666789 (Clockwise)

Preceding gene: 34497926

Following gene: 34497933

Centisome position: 56.1

GC content: 66.74

Gene sequence:

>1335_bases
ATGGATTATCGCAAACTGCTACACATCCCGCAAAAATGCGCCAGCCGGCTGGTCAACCACCACCTGAGCTGGCTGGGCGT
CGCCGCCTGCCTGCCGCTGCTGGGCACGGCCACCGCCTTCGCCGTCGCCAACGGCGCCAAGGAAACCCTGCCCGAGCAGG
TGCAGCAGCAACAGGTGATCGAGCGGCTGGCTTTGCCCGAGTTCCGTTTCGCCGACAGCCAGACCCGCTACTGGCGCGAC
GAGGCGGTCAAGCGCGGCGACACCGTGGCCCGGGTGCTGAACCGCCTGGGCGTGCGCGACAACGAGGCTCACGCCTTCCT
CTATACCAGCCCGCTGGCCAAGGATCTGCTCAAGCTGAAAGTCGGCGCCACGCTGACGGTGCAGACCAACGACGCCGGCG
AGCTTTTCGGCCTGCGCTTCCTGCAGGACGACGACAACGGCGAACAATTGCTGGTGGCGCTGGAGAAGCGCGACGGCAAA
TGGCAGGCCAGCGCCGACCCGGTGGCCGCGGAAAGCGTGGAGACCGTGCGCTCCATCACGCTGAAGCGCGGCGCCGCCGC
CGAACTGGCCGCCGCCCGCGTGCCGGCCGACATCCGCAACCAGTTGTCCGAAGTGTTTGCCGACCAGTTCGAACTCTCCA
GCCTGAAGCCGGGCGACCGCATCAATCTGGTGTACGAGACCATGGTCTACGCCGGCACCGCCATCGCCAGCGGCAACCTG
CTGGCGGTATCGATCGAGCGGGCCGGCAAGCTGCACCAAGCCTTTTACTTCGCCCACGACAGCGAAAGCGGCGCCTACTA
CGACGGCGAAGGCAAGCCGATCAAGAAAGGTTTCAGCCGCCAGCCGGTGGCCGGCGCCCGCATCAGCTCCGGCTTCGGCC
TGCGCAAGCATCCCATACTGCGCTCGCTGCGCATGCACTCCGGCATCGACTACGCCGCCAGCGCCGGCACGCCCATCGTC
GCGCCCGCCGACGGCGAGCTGGTGAAGGTCGCGCGCGAAAACGGCTACGGCAACGTGGTGATGATACGCCACAACGGCAA
GCTGACCACGCTGTACGCGCACATGAGCGCCTTCGGCAAGGGCATCCAGCCCGGCGGCAAAGTGAAGGCCGGCGATGTGA
TAGGCTATGTTGGAAGCACGGGCCGCTCCACCGGCGCCCACCTGCATTTCGAAGTGCGGGTCAACGACCAGCCGGTGGAT
CCGGCCACCAACGCCCTGCCCACCCCGGGCCTGAGCAAGACGCAGCTTGCGCAGTTCGACGCCAAGAAACAGGTGCTGAG
CGCGCGGCTGAACCTGCTGCAGAGCATCCCGGTCAACGTAGCCCAGATCGACTGA

Upstream 100 bases:

>100_bases
CTATCGCGCGGACCGCCTACCAAACATGATTTTGGCGCATGCACGCGCCGGAATCGGATCAATATTTTGCATAGGCAGGC
GGCGCCTGCCCGGAAAAGTG

Downstream 100 bases:

>100_bases
TGACAGACTTATATATCGGCATGATGTCCGGCACCAGCCTGGACGGCGTGGACGCCGTGCTGGTGCGCTTCGACGACGCC
GGCCGCCCGGAGCCGCAGGC

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MDYRKLLHIPQKCASRLVNHHLSWLGVAACLPLLGTATAFAVANGAKETLPEQVQQQQVIERLALPEFRFADSQTRYWRD
EAVKRGDTVARVLNRLGVRDNEAHAFLYTSPLAKDLLKLKVGATLTVQTNDAGELFGLRFLQDDDNGEQLLVALEKRDGK
WQASADPVAAESVETVRSITLKRGAAAELAAARVPADIRNQLSEVFADQFELSSLKPGDRINLVYETMVYAGTAIASGNL
LAVSIERAGKLHQAFYFAHDSESGAYYDGEGKPIKKGFSRQPVAGARISSGFGLRKHPILRSLRMHSGIDYAASAGTPIV
APADGELVKVARENGYGNVVMIRHNGKLTTLYAHMSAFGKGIQPGGKVKAGDVIGYVGSTGRSTGAHLHFEVRVNDQPVD
PATNALPTPGLSKTQLAQFDAKKQVLSARLNLLQSIPVNVAQID

Sequences:

>Translated_444_residues
MDYRKLLHIPQKCASRLVNHHLSWLGVAACLPLLGTATAFAVANGAKETLPEQVQQQQVIERLALPEFRFADSQTRYWRD
EAVKRGDTVARVLNRLGVRDNEAHAFLYTSPLAKDLLKLKVGATLTVQTNDAGELFGLRFLQDDDNGEQLLVALEKRDGK
WQASADPVAAESVETVRSITLKRGAAAELAAARVPADIRNQLSEVFADQFELSSLKPGDRINLVYETMVYAGTAIASGNL
LAVSIERAGKLHQAFYFAHDSESGAYYDGEGKPIKKGFSRQPVAGARISSGFGLRKHPILRSLRMHSGIDYAASAGTPIV
APADGELVKVARENGYGNVVMIRHNGKLTTLYAHMSAFGKGIQPGGKVKAGDVIGYVGSTGRSTGAHLHFEVRVNDQPVD
PATNALPTPGLSKTQLAQFDAKKQVLSARLNLLQSIPVNVAQID
>Mature_444_residues
MDYRKLLHIPQKCASRLVNHHLSWLGVAACLPLLGTATAFAVANGAKETLPEQVQQQQVIERLALPEFRFADSQTRYWRD
EAVKRGDTVARVLNRLGVRDNEAHAFLYTSPLAKDLLKLKVGATLTVQTNDAGELFGLRFLQDDDNGEQLLVALEKRDGK
WQASADPVAAESVETVRSITLKRGAAAELAAARVPADIRNQLSEVFADQFELSSLKPGDRINLVYETMVYAGTAIASGNL
LAVSIERAGKLHQAFYFAHDSESGAYYDGEGKPIKKGFSRQPVAGARISSGFGLRKHPILRSLRMHSGIDYAASAGTPIV
APADGELVKVARENGYGNVVMIRHNGKLTTLYAHMSAFGKGIQPGGKVKAGDVIGYVGSTGRSTGAHLHFEVRVNDQPVD
PATNALPTPGLSKTQLAQFDAKKQVLSARLNLLQSIPVNVAQID

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=363, Percent_Identity=31.9559228650138, Blast_Score=141, Evalue=9e-35,
Organism=Escherichia coli, GI1789099, Length=97, Percent_Identity=40.2061855670103, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI87082174, Length=97, Percent_Identity=39.1752577319588, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 48024; Mature: 48024

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYRKLLHIPQKCASRLVNHHLSWLGVAACLPLLGTATAFAVANGAKETLPEQVQQQQVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ERLALPEFRFADSQTRYWRDEAVKRGDTVARVLNRLGVRDNEAHAFLYTSPLAKDLLKLK
HHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHH
VGATLTVQTNDAGELFGLRFLQDDDNGEQLLVALEKRDGKWQASADPVAAESVETVRSIT
CCCEEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
LKRGAAAELAAARVPADIRNQLSEVFADQFELSSLKPGDRINLVYETMVYAGTAIASGNL
HCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEHEEHHHHHHCCEEECCCE
LAVSIERAGKLHQAFYFAHDSESGAYYDGEGKPIKKGFSRQPVAGARISSGFGLRKHPIL
EEEEHHHCCCHHHEEEEEECCCCCCEECCCCCHHHCCCCCCCCCCCEECCCCCCCHHHHH
RSLRMHSGIDYAASAGTPIVAPADGELVKVARENGYGNVVMIRHNGKLTTLYAHMSAFGK
HHHHHHCCCCCHHCCCCCEEECCCCCEEEEEECCCCCCEEEEEECCCEEEHHHHHHHHCC
GIQPGGKVKAGDVIGYVGSTGRSTGAHLHFEVRVNDQPVDPATNALPTPGLSKTQLAQFD
CCCCCCCEECCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH
AKKQVLSARLNLLQSIPVNVAQID
HHHHHHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure
MDYRKLLHIPQKCASRLVNHHLSWLGVAACLPLLGTATAFAVANGAKETLPEQVQQQQVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ERLALPEFRFADSQTRYWRDEAVKRGDTVARVLNRLGVRDNEAHAFLYTSPLAKDLLKLK
HHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHH
VGATLTVQTNDAGELFGLRFLQDDDNGEQLLVALEKRDGKWQASADPVAAESVETVRSIT
CCCEEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
LKRGAAAELAAARVPADIRNQLSEVFADQFELSSLKPGDRINLVYETMVYAGTAIASGNL
HCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEHEEHHHHHHCCEEECCCE
LAVSIERAGKLHQAFYFAHDSESGAYYDGEGKPIKKGFSRQPVAGARISSGFGLRKHPIL
EEEEHHHCCCHHHEEEEEECCCCCCEECCCCCHHHCCCCCCCCCCCEECCCCCCCHHHHH
RSLRMHSGIDYAASAGTPIVAPADGELVKVARENGYGNVVMIRHNGKLTTLYAHMSAFGK
HHHHHHCCCCCHHCCCCCEEECCCCCEEEEEECCCCCCEEEEEECCCEEEHHHHHHHHCC
GIQPGGKVKAGDVIGYVGSTGRSTGAHLHFEVRVNDQPVDPATNALPTPGLSKTQLAQFD
CCCCCCCEECCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH
AKKQVLSARLNLLQSIPVNVAQID
HHHHHHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]