| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497885
Identifier: 34497885
GI number: 34497885
Start: 2613466
End: 2614566
Strand: Direct
Name: 34497885
Synonym: CV_2430
Alternate gene names: NA
Gene position: 2613466-2614566 (Clockwise)
Preceding gene: 34497883
Following gene: 34497886
Centisome position: 55.01
GC content: 55.22
Gene sequence:
>1101_bases ATGGGCGAAGGCGTGCTGCGATTCAATGGCGAACGGCTGGATCCCGCAAATGGGCATTACCAACTGGGAAACGGGCATCG GGCGCATAGCCCAACGATGATGCGTTTCATCAGCCCTGACCATGCCAGCCCATTCGGCGGCGGCGGGCTCAATCCGTATG CCTATTGCGCCGGCGACCCGATCAACCGTGTCGATCCTGCTGGGCGCCACAGCTTCTGGGGGTGGCTGGGCATTGGCGTC GGGATGAGTTTGGGCGTCTTGCTGACGCCGATATCTGGAGGGACATCACTGGCCGCGGTGTTGTCCACCGTATCGGTCAT CAGCGCGGCGGCATCCGCCGGCTTGGCCATCGCGCAACAGTTTGTGGAGGCATCGGACCCCCAAGCCGCAGCTGCATTGG GGTGGGCCGCGCTTGGGGCAGGGAGTGTGAGCGGACTCAGCTCGCTGGCCTTGACTTGGGCTGCGCCTGGGGCGCGTTCA TTAATCGGCTTGCTGCCGGGAAGCAGTGATCGTCCGTTTGGTGGATTGATGATGTCTGGAGGCGTCAGAGCGGAAACCAC AGCAGGCCAGGCTGGGTCTGGGCATGCCGGAATATGGCGCGCCATCCAGGAGCGAATCCCTTTCCTGCGCAGACGCGCCG TCTTCAGCGAAGGCAGCGAGGCGATATTATATAAAAAAGGGAATTTCTTAATAAAAGAATATAAAAACCAGCAAGTGGAT CTAAGACAGCTCAGCAATGAGGCATCGATTTTCAATAGAGTTCATGCCTCAACCACAGCAAAAGTAAAACCTCCCCGCAG CATAAAAATGCCTTTGGTGAAAGGCGTGCCGCTTTCCAATAATCATGTTTTGTTTGAACTGACAAGCGATCATGCACGTT CCCTGGTGAAGTCGATGGATAGAATCCACGATCTGGGAATACTGCATGGCGATATCAGCGATGGCAATATCTTGTTCGAG AAGGCAGCGAATGAATTCAAATTCATAGACTTCAGCGCATCTGCAATGAATAGCTCGGCATTGGAAATGCGCGCTGAAAG CGACCATTTGCGCTGGAAGATACAGCAATGGCCCAACTATTCAGAGGAATGGTTAATCTGA
Upstream 100 bases:
>100_bases GTGCGATCTTTCGGACTCTCCGCAAATCAGCCGCCGCCATATCCCTGCAGAAAGCTCTCCGGGCAGTTTGAACGTTTCAA TTGGCTTCTGGGAGACTGCT
Downstream 100 bases:
>100_bases AGAACCACTCCGCATGCGTGAGCCGCTCTCGATGCCGCCTGTCGTCATGACTGCGCGGATCGCGCAAGCCTGTACCCGAG GGGGAGGGCGGCAATGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MGEGVLRFNGERLDPANGHYQLGNGHRAHSPTMMRFISPDHASPFGGGGLNPYAYCAGDPINRVDPAGRHSFWGWLGIGV GMSLGVLLTPISGGTSLAAVLSTVSVISAAASAGLAIAQQFVEASDPQAAAALGWAALGAGSVSGLSSLALTWAAPGARS LIGLLPGSSDRPFGGLMMSGGVRAETTAGQAGSGHAGIWRAIQERIPFLRRRAVFSEGSEAILYKKGNFLIKEYKNQQVD LRQLSNEASIFNRVHASTTAKVKPPRSIKMPLVKGVPLSNNHVLFELTSDHARSLVKSMDRIHDLGILHGDISDGNILFE KAANEFKFIDFSASAMNSSALEMRAESDHLRWKIQQWPNYSEEWLI
Sequences:
>Translated_366_residues MGEGVLRFNGERLDPANGHYQLGNGHRAHSPTMMRFISPDHASPFGGGGLNPYAYCAGDPINRVDPAGRHSFWGWLGIGV GMSLGVLLTPISGGTSLAAVLSTVSVISAAASAGLAIAQQFVEASDPQAAAALGWAALGAGSVSGLSSLALTWAAPGARS LIGLLPGSSDRPFGGLMMSGGVRAETTAGQAGSGHAGIWRAIQERIPFLRRRAVFSEGSEAILYKKGNFLIKEYKNQQVD LRQLSNEASIFNRVHASTTAKVKPPRSIKMPLVKGVPLSNNHVLFELTSDHARSLVKSMDRIHDLGILHGDISDGNILFE KAANEFKFIDFSASAMNSSALEMRAESDHLRWKIQQWPNYSEEWLI >Mature_365_residues GEGVLRFNGERLDPANGHYQLGNGHRAHSPTMMRFISPDHASPFGGGGLNPYAYCAGDPINRVDPAGRHSFWGWLGIGVG MSLGVLLTPISGGTSLAAVLSTVSVISAAASAGLAIAQQFVEASDPQAAAALGWAALGAGSVSGLSSLALTWAAPGARSL IGLLPGSSDRPFGGLMMSGGVRAETTAGQAGSGHAGIWRAIQERIPFLRRRAVFSEGSEAILYKKGNFLIKEYKNQQVDL RQLSNEASIFNRVHASTTAKVKPPRSIKMPLVKGVPLSNNHVLFELTSDHARSLVKSMDRIHDLGILHGDISDGNILFEK AANEFKFIDFSASAMNSSALEMRAESDHLRWKIQQWPNYSEEWLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39070; Mature: 38939
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEGVLRFNGERLDPANGHYQLGNGHRAHSPTMMRFISPDHASPFGGGGLNPYAYCAGDP CCCCEEEECCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCC INRVDPAGRHSFWGWLGIGVGMSLGVLLTPISGGTSLAAVLSTVSVISAAASAGLAIAQQ CCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FVEASDPQAAAALGWAALGAGSVSGLSSLALTWAAPGARSLIGLLPGSSDRPFGGLMMSG HHHCCCCHHHHHHHHHHHCCCCHHHHHHHEEEECCCCHHHHEEECCCCCCCCCCCEEECC GVRAETTAGQAGSGHAGIWRAIQERIPFLRRRAVFSEGSEAILYKKGNFLIKEYKNQQVD CCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEHHCCCCHH LRQLSNEASIFNRVHASTTAKVKPPRSIKMPLVKGVPLSNNHVLFELTSDHARSLVKSMD HHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEECCCCCCCEEEEEECCHHHHHHHHHHH RIHDLGILHGDISDGNILFEKAANEFKFIDFSASAMNSSALEMRAESDHLRWKIQQWPNY HHHHHHEEECCCCCCCEEEEECCCCEEEEEEEHHHCCCHHHHEECCCCCEEEEEECCCCC SEEWLI CCCCCC >Mature Secondary Structure GEGVLRFNGERLDPANGHYQLGNGHRAHSPTMMRFISPDHASPFGGGGLNPYAYCAGDP CCCEEEECCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCC INRVDPAGRHSFWGWLGIGVGMSLGVLLTPISGGTSLAAVLSTVSVISAAASAGLAIAQQ CCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FVEASDPQAAAALGWAALGAGSVSGLSSLALTWAAPGARSLIGLLPGSSDRPFGGLMMSG HHHCCCCHHHHHHHHHHHCCCCHHHHHHHEEEECCCCHHHHEEECCCCCCCCCCCEEECC GVRAETTAGQAGSGHAGIWRAIQERIPFLRRRAVFSEGSEAILYKKGNFLIKEYKNQQVD CCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEHHCCCCHH LRQLSNEASIFNRVHASTTAKVKPPRSIKMPLVKGVPLSNNHVLFELTSDHARSLVKSMD HHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEECCCCCCCEEEEEECCHHHHHHHHHHH RIHDLGILHGDISDGNILFEKAANEFKFIDFSASAMNSSALEMRAESDHLRWKIQQWPNY HHHHHHEEECCCCCCCEEEEECCCCEEEEEEEHHHCCCHHHHEECCCCCEEEEEECCCCC SEEWLI CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA