| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497860
Identifier: 34497860
GI number: 34497860
Start: 2589952
End: 2590578
Strand: Direct
Name: 34497860
Synonym: CV_2405
Alternate gene names: NA
Gene position: 2589952-2590578 (Clockwise)
Preceding gene: 34497859
Following gene: 34497861
Centisome position: 54.51
GC content: 65.07
Gene sequence:
>627_bases ATGACTCTGCAAGCCTATGCCGTACTGTATTCTGCCTTTGTCATCGCGCTGTTTGCCGCCGTGGTCTGGAAAACCGATGT GCTGAGGGATCGCGGCCAGCTTCCTCCGGGCCTCGCCATCGGGCAACAGACTTTCAGCCTGGCGCGCAGCCAGCTGATCT GGTGGACTTTTCTGGTTATGGTGATTTCGGGATGGCTGCTGCTGACCACGGGCAATCTGCCCGCTCCGACGCTGGAGTTG CTGGGCCTCTTGGGCATCAGCGTGGCCACTTCCGGCACCTCGGCGCTGATCGACGCGCCGGCAGGAGGCGCGTCGGCGAC GCTGCAACGCTCCCGCGGCTGGCTGCAGGATGTGCTGGATGACGGCCAGGGCGTGTCGATACACCGCTACCAGGCGTTGC TGGCGAATGCCGGGATAGGTGTCGCCTTCCTGTACAAATCCGTGCAGATGCAAGGCTTCTACCCGATAGACGCCAGCTGG CTGGCCGTGCTTGGCCTGAGCAGCGCGACCTACGTCGGCATGAAATCCCGTGAAGCCGGCAGTCCCGCGCCGCAGGTCGT TCCGGCACCGTCGCAAGCGGGCAGCGCCGCCGCCAATCCGCCGCCTTCGCCGGCGATGACCGCCTGA
Upstream 100 bases:
>100_bases ATCGTCGCACCTGTCCATCGGAATGGGGCGAAATCGCGGGGCGAGGACATGGGCTTGGCTATGCTGAATGAGTTTCAACC TTCCACAGCAAGGAGCTGAA
Downstream 100 bases:
>100_bases GGCAGCGTCTAATTTGCCGCCGCGCATGGTCAGGCGGGCGGCAATCTCATACAATAATGGTCGATTCAATAGCGGTCTCC ACGCGCGAACGCGCGTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTLQAYAVLYSAFVIALFAAVVWKTDVLRDRGQLPPGLAIGQQTFSLARSQLIWWTFLVMVISGWLLLTTGNLPAPTLEL LGLLGISVATSGTSALIDAPAGGASATLQRSRGWLQDVLDDGQGVSIHRYQALLANAGIGVAFLYKSVQMQGFYPIDASW LAVLGLSSATYVGMKSREAGSPAPQVVPAPSQAGSAAANPPPSPAMTA
Sequences:
>Translated_208_residues MTLQAYAVLYSAFVIALFAAVVWKTDVLRDRGQLPPGLAIGQQTFSLARSQLIWWTFLVMVISGWLLLTTGNLPAPTLEL LGLLGISVATSGTSALIDAPAGGASATLQRSRGWLQDVLDDGQGVSIHRYQALLANAGIGVAFLYKSVQMQGFYPIDASW LAVLGLSSATYVGMKSREAGSPAPQVVPAPSQAGSAAANPPPSPAMTA >Mature_207_residues TLQAYAVLYSAFVIALFAAVVWKTDVLRDRGQLPPGLAIGQQTFSLARSQLIWWTFLVMVISGWLLLTTGNLPAPTLELL GLLGISVATSGTSALIDAPAGGASATLQRSRGWLQDVLDDGQGVSIHRYQALLANAGIGVAFLYKSVQMQGFYPIDASWL AVLGLSSATYVGMKSREAGSPAPQVVPAPSQAGSAAANPPPSPAMTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21685; Mature: 21554
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLQAYAVLYSAFVIALFAAVVWKTDVLRDRGQLPPGLAIGQQTFSLARSQLIWWTFLVM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VISGWLLLTTGNLPAPTLELLGLLGISVATSGTSALIDAPAGGASATLQRSRGWLQDVLD HHCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHC DGQGVSIHRYQALLANAGIGVAFLYKSVQMQGFYPIDASWLAVLGLSSATYVGMKSREAG CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHEECCCCCCCC SPAPQVVPAPSQAGSAAANPPPSPAMTA CCCCCEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLQAYAVLYSAFVIALFAAVVWKTDVLRDRGQLPPGLAIGQQTFSLARSQLIWWTFLVM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VISGWLLLTTGNLPAPTLELLGLLGISVATSGTSALIDAPAGGASATLQRSRGWLQDVLD HHCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHC DGQGVSIHRYQALLANAGIGVAFLYKSVQMQGFYPIDASWLAVLGLSSATYVGMKSREAG CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHEECCCCCCCC SPAPQVVPAPSQAGSAAANPPPSPAMTA CCCCCEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA