Click here to switch to the map view.

The map label for this gene is ribE [H]

Identifier: 34497842

GI number: 34497842

Start: 2569662

End: 2570279

Strand: Direct

Name: ribE [H]

Synonym: CV_2387

Alternate gene names: 34497842

Gene position: 2569662-2570279 (Clockwise)

Preceding gene: 34497838

Following gene: 34497843

Centisome position: 54.09

GC content: 65.21

Gene sequence:

>618_bases
GTGTTCACCGGTATCGTCCAGGGCGTGGCCGAAGTGGTCGCCATCGAAGAAAAACAGGATTTCCGCACCCATATCGTCCG
TCTGCCCCAGGAGATGCTGCCCGGACTGCAGCTCGGCGCCTCCGTCGCCCATAACGGCTGCTGCCTGACCGTCACCCGCG
TCGATGGCGATCTGGTTCACTTCGACCTGATGCAGGAAACGCTGCGGGTCACCAACCTGGGCGGGATCCAGGCTGGCGAC
GGCGTGAACGTGGAGCGCGCCGCGCGCTTCGGCGACGACATCGGCGGCCACGCGATGTCCGGCCACGTGATGGGCCTCGC
AGCCGTGACCGAGGTCATCGAATCCCCGAACAACCGCACCGTCTGGTTCGAGCTGCCGGCGGGCCTGGAAAAATACGTGT
TCGCCAAGGGGTATATCGGGATAGACGGCATCAGCCTCACGGTGGGCGCGGTAGAAGGCCGCCGTTTCTGCGTGCACCTG
ATTCCGGAGACGCTGAACCGGACCAATATCGCCGGCCGCAAGCCGGGCGACAGGATCAACATCGAAATCGACCCTCAGAC
CCAGGCCATCGTCGATACCGTCGAGCGCGTGCTGGCGCAGCGCGGCCAGGTCGCGTGA

Upstream 100 bases:

>100_bases
CTGGAAACTCCATGGCGTTTTTTTGTTCCCGAACAGATTGGAAAACAGCCATTCGGCTACAATGTTGTCCAAACGACAAT
TCAAACCAAGGAGGCTTGCC

Downstream 100 bases:

>100_bases
TCTTGCGCGATCTGCCGGTGCTGGCGTCGTGGAGCGGCGGCAAAGACAGCTGCCTCGCGCTGTGGCGGGCGGTGCGGGCC
GGCGCCCGGCCGCAGGCGCT

Product: riboflavin synthase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MFTGIVQGVAEVVAIEEKQDFRTHIVRLPQEMLPGLQLGASVAHNGCCLTVTRVDGDLVHFDLMQETLRVTNLGGIQAGD
GVNVERAARFGDDIGGHAMSGHVMGLAAVTEVIESPNNRTVWFELPAGLEKYVFAKGYIGIDGISLTVGAVEGRRFCVHL
IPETLNRTNIAGRKPGDRINIEIDPQTQAIVDTVERVLAQRGQVA

Sequences:

>Translated_205_residues
MFTGIVQGVAEVVAIEEKQDFRTHIVRLPQEMLPGLQLGASVAHNGCCLTVTRVDGDLVHFDLMQETLRVTNLGGIQAGD
GVNVERAARFGDDIGGHAMSGHVMGLAAVTEVIESPNNRTVWFELPAGLEKYVFAKGYIGIDGISLTVGAVEGRRFCVHL
IPETLNRTNIAGRKPGDRINIEIDPQTQAIVDTVERVLAQRGQVA
>Mature_205_residues
MFTGIVQGVAEVVAIEEKQDFRTHIVRLPQEMLPGLQLGASVAHNGCCLTVTRVDGDLVHFDLMQETLRVTNLGGIQAGD
GVNVERAARFGDDIGGHAMSGHVMGLAAVTEVIESPNNRTVWFELPAGLEKYVFAKGYIGIDGISLTVGAVEGRRFCVHL
IPETLNRTNIAGRKPGDRINIEIDPQTQAIVDTVERVLAQRGQVA

Specific function: Riboflavin synthase is a bifunctional enzyme complex catalyzing the formation of riboflavin from 5-amino-6-(1'-D)- ribityl-amino-2,4(1H,3H)-pyrimidinedione and L-3,4-dihydrohy-2- butanone-4-phosphate via 6,7-dimethyl-8-lumazine. The alpha subunit catalyze

COG id: COG0307

COG function: function code H; Riboflavin synthase alpha chain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 lumazine-binding repeats [H]

Homologues:

Organism=Escherichia coli, GI1787952, Length=202, Percent_Identity=65.8415841584158, Blast_Score=281, Evalue=2e-77,
Organism=Saccharomyces cerevisiae, GI6319733, Length=195, Percent_Identity=31.7948717948718, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001783
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00677 Lum_binding [H]

EC number: =2.5.1.9 [H]

Molecular weight: Translated: 22124; Mature: 22124

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTGIVQGVAEVVAIEEKQDFRTHIVRLPQEMLPGLQLGASVAHNGCCLTVTRVDGDLVH
CCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHCHHHCCCCEEEEEEECCCCEEH
FDLMQETLRVTNLGGIQAGDGVNVERAARFGDDIGGHAMSGHVMGLAAVTEVIESPNNRT
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE
VWFELPAGLEKYVFAKGYIGIDGISLTVGAVEGRRFCVHLIPETLNRTNIAGRKPGDRIN
EEEECCCCCHHHHHCCCCEECCCCEEEEEECCCCEEEEEECHHHCCCCCCCCCCCCCEEE
IEIDPQTQAIVDTVERVLAQRGQVA
EEECCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFTGIVQGVAEVVAIEEKQDFRTHIVRLPQEMLPGLQLGASVAHNGCCLTVTRVDGDLVH
CCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHCHHHCCCCEEEEEEECCCCEEH
FDLMQETLRVTNLGGIQAGDGVNVERAARFGDDIGGHAMSGHVMGLAAVTEVIESPNNRT
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE
VWFELPAGLEKYVFAKGYIGIDGISLTVGAVEGRRFCVHLIPETLNRTNIAGRKPGDRIN
EEEECCCCCHHHHHCCCCEECCCCEEEEEECCCCEEEEEECHHHCCCCCCCCCCCCCEEE
IEIDPQTQAIVDTVERVLAQRGQVA
EEECCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9022701; 9023191; 9097039; 9278503; 11377200 [H]