| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497811
Identifier: 34497811
GI number: 34497811
Start: 2543648
End: 2544286
Strand: Direct
Name: 34497811
Synonym: CV_2356
Alternate gene names: NA
Gene position: 2543648-2544286 (Clockwise)
Preceding gene: 34497810
Following gene: 34497812
Centisome position: 53.54
GC content: 62.6
Gene sequence:
>639_bases ATGACCCGGGGCCGGAAGATTCCGGCCCTTGTTTTTTTGAGAGAAACGGAAAAGAAAATGAAATCGATTTGCCTGTTTTG CGGTTCCAACAAAGGCGGCAAGCCGGAGTACGAGGAAGCTGCCCGGGTATTCGGCCGCACCTTGGCCGAGCAAGGCATCA CCCTGGTGTACGGCGCGGGCAAGGTGGGCCTGATGGGCTTGGCCGCCGACGCCGCGCTGGAAGCCGGGGGCAAGGTGATC GGCGTGATCCCGGAATTCCTCAAGGCCAAGGAAGTGGCGCACCTGGGCCTGACCGAGCTGCACATCACCGAAACCATGCA TCAGCGCAAGGCCATGATGGCGCAGCTGTCCGACGGCTTCATCGCCTTGCCGGGCGGTTTCGGCACTTTCGACGAGCTGT TCGAGATCCTGACCTGGGCGCAGCTGTCGGTGCACAACAAGCCGGTGGGCGTGCTGGATGCCGGCGGATTCTATCAGCCC TTGCGGGCGCTGGTGGAACACGCGGTCAGCGAAGGCTTCGTCCCCAAGGGCAATCAGGACCTGTTCCGCATCGAGCGCGA TCTGCCGGCGCTGTTGAGCTGGATGCGGCAATACCAGCCCAGCCACGTCGCCAAGTGGCTGGATCTGGCGCGTACTTGA
Upstream 100 bases:
>100_bases GACGAGCGCGTATTGAAGGCGCTGGCTGGCCTGGGTGAGCGCACGTCCTTCGTCAAAGTGTTGGGCTCTTATCCGACCGC GGTGTTGTGAGTCGCCTGGA
Downstream 100 bases:
>100_bases GGGGCTTGATGGAAAGGGCCGATTCGAAAGCGTCGCCTTGGCTGCGCATGCGGCGCGCGGCGGCCTGGCCGCTGGCGCTG CTGCTGGCGGCGATCATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTRGRKIPALVFLRETEKKMKSICLFCGSNKGGKPEYEEAARVFGRTLAEQGITLVYGAGKVGLMGLAADAALEAGGKVI GVIPEFLKAKEVAHLGLTELHITETMHQRKAMMAQLSDGFIALPGGFGTFDELFEILTWAQLSVHNKPVGVLDAGGFYQP LRALVEHAVSEGFVPKGNQDLFRIERDLPALLSWMRQYQPSHVAKWLDLART
Sequences:
>Translated_212_residues MTRGRKIPALVFLRETEKKMKSICLFCGSNKGGKPEYEEAARVFGRTLAEQGITLVYGAGKVGLMGLAADAALEAGGKVI GVIPEFLKAKEVAHLGLTELHITETMHQRKAMMAQLSDGFIALPGGFGTFDELFEILTWAQLSVHNKPVGVLDAGGFYQP LRALVEHAVSEGFVPKGNQDLFRIERDLPALLSWMRQYQPSHVAKWLDLART >Mature_211_residues TRGRKIPALVFLRETEKKMKSICLFCGSNKGGKPEYEEAARVFGRTLAEQGITLVYGAGKVGLMGLAADAALEAGGKVIG VIPEFLKAKEVAHLGLTELHITETMHQRKAMMAQLSDGFIALPGGFGTFDELFEILTWAQLSVHNKPVGVLDAGGFYQPL RALVEHAVSEGFVPKGNQDLFRIERDLPALLSWMRQYQPSHVAKWLDLART
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LOG family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322406, Length=204, Percent_Identity=35.7843137254902, Blast_Score=135, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005269 [H]
Pfam domain/function: PF03641 Lysine_decarbox [H]
EC number: NA
Molecular weight: Translated: 23266; Mature: 23135
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRGRKIPALVFLRETEKKMKSICLFCGSNKGGKPEYEEAARVFGRTLAEQGITLVYGAG CCCCCCCCHHEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECC KVGLMGLAADAALEAGGKVIGVIPEFLKAKEVAHLGLTELHITETMHQRKAMMAQLSDGF CCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCE IALPGGFGTFDELFEILTWAQLSVHNKPVGVLDAGGFYQPLRALVEHAVSEGFVPKGNQD EECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCHH LFRIERDLPALLSWMRQYQPSHVAKWLDLART HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure TRGRKIPALVFLRETEKKMKSICLFCGSNKGGKPEYEEAARVFGRTLAEQGITLVYGAG CCCCCCCHHEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECC KVGLMGLAADAALEAGGKVIGVIPEFLKAKEVAHLGLTELHITETMHQRKAMMAQLSDGF CCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCE IALPGGFGTFDELFEILTWAQLSVHNKPVGVLDAGGFYQPLRALVEHAVSEGFVPKGNQD EECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCHH LFRIERDLPALLSWMRQYQPSHVAKWLDLART HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 2116366 [H]