| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497774
Identifier: 34497774
GI number: 34497774
Start: 2510599
End: 2511015
Strand: Reverse
Name: 34497774
Synonym: CV_2319
Alternate gene names: NA
Gene position: 2511015-2510599 (Counterclockwise)
Preceding gene: 34497775
Following gene: 34497772
Centisome position: 52.85
GC content: 59.95
Gene sequence:
>417_bases ATGGATCCGATTTCTATCGCGATGGGGCTGGCCACGTTCGCTCCCGACATCATCAAATGGATTAGCGGCGACAGCAAAGC GAGCGACGCCGCCCAGAAAGTCGTAGACATCGCCCAGCAACTGACGGGTACGCGCACCGGCGGGGATGCGCTCAATGCGG TTCGCAACAACCCGACGCTGGCTTTTCAACTGCAGCAGGAAATCGATAGAAACAAGATGCAGCTGGCACAGATCAGCCAG GCGACAGCACTTGCCGAAATCCAGGTGGACACGACAGGCACCGTCGCGGTCAACGCGACCATGCAAGCGGAAGCCAGAGC GGAGCATTGGCCGACATACTCCTGGCGGCCCTTCATCGGCAGCCGAAGCCCAATTCTTGGGGCAGGTTCTCGCACCAGTT CGTCGGCCTCTCTCTAG
Upstream 100 bases:
>100_bases TGCGCTTCCTGGCCTATATGACCACGTTGCATAACTGGCCGACGTTCGGCCGCGGCTGGGCGGTCCGCATCTCGGACAAT ATGCTCAGGGGAGCGATGTG
Downstream 100 bases:
>100_bases ACGCCACTCCAGATGAAACCACCTTGCTGAACTTGCGCCACCTGCAGGAAAGACATCGACTGACCCATACACTGTTTGCC GCCATTCACCAGCATTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MDPISIAMGLATFAPDIIKWISGDSKASDAAQKVVDIAQQLTGTRTGGDALNAVRNNPTLAFQLQQEIDRNKMQLAQISQ ATALAEIQVDTTGTVAVNATMQAEARAEHWPTYSWRPFIGSRSPILGAGSRTSSSASL
Sequences:
>Translated_138_residues MDPISIAMGLATFAPDIIKWISGDSKASDAAQKVVDIAQQLTGTRTGGDALNAVRNNPTLAFQLQQEIDRNKMQLAQISQ ATALAEIQVDTTGTVAVNATMQAEARAEHWPTYSWRPFIGSRSPILGAGSRTSSSASL >Mature_138_residues MDPISIAMGLATFAPDIIKWISGDSKASDAAQKVVDIAQQLTGTRTGGDALNAVRNNPTLAFQLQQEIDRNKMQLAQISQ ATALAEIQVDTTGTVAVNATMQAEARAEHWPTYSWRPFIGSRSPILGAGSRTSSSASL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14659; Mature: 14659
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPISIAMGLATFAPDIIKWISGDSKASDAAQKVVDIAQQLTGTRTGGDALNAVRNNPTL CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEE AFQLQQEIDRNKMQLAQISQATALAEIQVDTTGTVAVNATMQAEARAEHWPTYSWRPFIG EEEEHHHHCHHHHHHHHHHHHHHEEEEEECCCCEEEEEEECCCHHHHHHCCCCCCCCCCC SRSPILGAGSRTSSSASL CCCCCEECCCCCCCCCCC >Mature Secondary Structure MDPISIAMGLATFAPDIIKWISGDSKASDAAQKVVDIAQQLTGTRTGGDALNAVRNNPTL CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEE AFQLQQEIDRNKMQLAQISQATALAEIQVDTTGTVAVNATMQAEARAEHWPTYSWRPFIG EEEEHHHHCHHHHHHHHHHHHHHEEEEEECCCCEEEEEEECCCHHHHHHCCCCCCCCCCC SRSPILGAGSRTSSSASL CCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA