| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yigI [C]
Identifier: 34497754
GI number: 34497754
Start: 2487998
End: 2488465
Strand: Direct
Name: yigI [C]
Synonym: CV_2299
Alternate gene names: 34497754
Gene position: 2487998-2488465 (Clockwise)
Preceding gene: 34497753
Following gene: 34497755
Centisome position: 52.37
GC content: 65.81
Gene sequence:
>468_bases ATGATCCCGACGCCGGCCAATCCCCGGATACTGGAGACGATGAGCCAGCTCTTCGTCTCCTTTCCCCACTGCGCGACGCT GGGCTTCGAATACGTCGGCACCGACGGCCGCAAGCCCACGCTGAAGCTGCAATGGCGCGAGGATCTGGTGGGCAATCCGG CCACCGGCATCCTCCACGGCGGGGTGATCACCTCGCTGGTGGATACCTGCAGCGCCATCGCCGTCACCGCGCACCTGCCG GAGCTGGAAACCATCGCCACGCTGGATCTGCGCATCGATTACCTGAAGTCCGCCACGCCGGGCAAGGCCATCCACTGCAC TGCGGAGTGCTACCGGCTGGCCAGCCAGATCGCGTTCACCCGGGCCGTCTGCTATCACGACAATCCGGCTGATCCGATCG CCCACGGCGTCGCCACCTTCATGCGGGAATCCAGCCGCACGCCGATGCTGCAGGAGGACGGACGATGA
Upstream 100 bases:
>100_bases GCGAGAAGCTGATCGGTCTGGAGATCGTGGCCGAGTCCGAGGCCGAGTGCGCCGAAGGCGAAACCGAGGGCGGCGACGCG CCGGAGCAGGGCGAAGCGTG
Downstream 100 bases:
>100_bases GCGAATTCATGCAACGCTTCGCCGACTTGCGCGATCGCAAGGCCTATGCCGAGATCGTGGACGCGCTGCCCTACGTCAAG CTGATGGGCACCTCGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation-Like Protein; Thioesterase Superfamily; Thioesterase Family Protein Domain Protein; Conserved Domain Protein; Protein Possibly Involved In Aromatic Compounds Catabolism
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MIPTPANPRILETMSQLFVSFPHCATLGFEYVGTDGRKPTLKLQWREDLVGNPATGILHGGVITSLVDTCSAIAVTAHLP ELETIATLDLRIDYLKSATPGKAIHCTAECYRLASQIAFTRAVCYHDNPADPIAHGVATFMRESSRTPMLQEDGR
Sequences:
>Translated_155_residues MIPTPANPRILETMSQLFVSFPHCATLGFEYVGTDGRKPTLKLQWREDLVGNPATGILHGGVITSLVDTCSAIAVTAHLP ELETIATLDLRIDYLKSATPGKAIHCTAECYRLASQIAFTRAVCYHDNPADPIAHGVATFMRESSRTPMLQEDGR >Mature_155_residues MIPTPANPRILETMSQLFVSFPHCATLGFEYVGTDGRKPTLKLQWREDLVGNPATGILHGGVITSLVDTCSAIAVTAHLP ELETIATLDLRIDYLKSATPGKAIHCTAECYRLASQIAFTRAVCYHDNPADPIAHGVATFMRESSRTPMLQEDGR
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16896; Mature: 16896
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPTPANPRILETMSQLFVSFPHCATLGFEYVGTDGRKPTLKLQWREDLVGNPATGILHG CCCCCCCCHHHHHHHHHHHCCCCHHHHCCCEECCCCCCCEEEEEECCCCCCCCCCHHHHH GVITSLVDTCSAIAVTAHLPELETIATLDLRIDYLKSATPGKAIHCTAECYRLASQIAFT HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH RAVCYHDNPADPIAHGVATFMRESSRTPMLQEDGR HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIPTPANPRILETMSQLFVSFPHCATLGFEYVGTDGRKPTLKLQWREDLVGNPATGILHG CCCCCCCCHHHHHHHHHHHCCCCHHHHCCCEECCCCCCCEEEEEECCCCCCCCCCHHHHH GVITSLVDTCSAIAVTAHLPELETIATLDLRIDYLKSATPGKAIHCTAECYRLASQIAFT HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH RAVCYHDNPADPIAHGVATFMRESSRTPMLQEDGR HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA