| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34497727
Identifier: 34497727
GI number: 34497727
Start: 2460451
End: 2461506
Strand: Direct
Name: 34497727
Synonym: CV_2272
Alternate gene names: NA
Gene position: 2460451-2461506 (Clockwise)
Preceding gene: 34497726
Following gene: 34497728
Centisome position: 51.79
GC content: 62.41
Gene sequence:
>1056_bases ATGGAAATGAGTACAGTAACCGCAACAGCGCCAACTTATGGCATCGACAACGGCGTACGCCACCTGTTGACGCCGCAAAA TCTGGCCGAACTCGGTCTCGACTGGCCCACGCTGCAGGCGTTCCTGGCTTCGCCAAGCCTGCAAATCAATGGCCAGTCGC CGGACGGGATCTCGATCAACGAGTCGATCTTCGGCAACTATTCCGGCCCCAGCGCGGCGGTCCTGGGCTGGATGGCTTAC ATGAACGTCGGCGAGCCGCTGATCGAGGAGCGCGCCAATGTGATCCAACCACCGGCAGATACGCTGTCCACTCGCGTTTA TGCGAATCGGTCGGGCGATCCCAGGTCCTTCAATGAGTCGGTTCAGTTCACCGTCTCCAATACGATCAACTGGTCTCTGG AGGGGACGGCCCAGCTTACGTTCGGCGGCAAGGCCAGCGCCGCGATGACTGTGCAGCTGCAACAAAGCCTGGCAAGCAGC CTCGCGCAGATGACGGCGAATACGCACATCCAGCACAACCATCGAGACAATGTCGGCACGGAGGATCAGAGCCTAACCGC GACCACCACGACGAACACCGTCACGGAAACGGGAACGGGTTCCGCCACGGGCACGGGAGAGGAGTTTGCCCAGTTGATGC TTGGCATCACCGGCGCGGTCGGCGGATCGCTGACCACATCGTGGACCTCGAACTCCTCGGTGTCGGGCAGCGTCGCGGCC GCCAGCCGCGTGGAGACCATGGTCACGCAGCGGCGTCAGATCAGGCAGTACATCTACCAGCTGCCCATAGACGTGGCGGG CTACGTCGCCTTGCATTACCCGCTGCCGGTCCCGGTGGGCGACTCCCCGCCACAAGCTCCGTCGACCGCCAAGGTCAACG TCATCGCCCGCAATATCTCCAGCCTTAGCAATCTGCTGCCGGCCGGGCAATCCTATCGATCGACGGGGATGGCGGAGACG GTGTCGGCCCTTGCGGTGGAGCACACCGTGTTCGCGTCGGAACCCATTTCCGCCGCGAACAACGCCCTCAGCATAGACCG GCCGCATTTCCTGTAA
Upstream 100 bases:
>100_bases GCCGACGCCTCCCACGTCGTAGGCATGAGGATCAGGCAATGCGCGCAGCGGCTTCCATTCTGTGAAGCGCTGCAGGGTGT GAGATTTCGCTCTAAAGGAA
Downstream 100 bases:
>100_bases ATCCGCATCAACAAGCACACGAGGATCGCCATCATGGTCTTTGACAATATTTTCAGCAATGCCGAAAGCGCTGCCCAAAG CGGAAACGTCGCGGAAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MEMSTVTATAPTYGIDNGVRHLLTPQNLAELGLDWPTLQAFLASPSLQINGQSPDGISINESIFGNYSGPSAAVLGWMAY MNVGEPLIEERANVIQPPADTLSTRVYANRSGDPRSFNESVQFTVSNTINWSLEGTAQLTFGGKASAAMTVQLQQSLASS LAQMTANTHIQHNHRDNVGTEDQSLTATTTTNTVTETGTGSATGTGEEFAQLMLGITGAVGGSLTTSWTSNSSVSGSVAA ASRVETMVTQRRQIRQYIYQLPIDVAGYVALHYPLPVPVGDSPPQAPSTAKVNVIARNISSLSNLLPAGQSYRSTGMAET VSALAVEHTVFASEPISAANNALSIDRPHFL
Sequences:
>Translated_351_residues MEMSTVTATAPTYGIDNGVRHLLTPQNLAELGLDWPTLQAFLASPSLQINGQSPDGISINESIFGNYSGPSAAVLGWMAY MNVGEPLIEERANVIQPPADTLSTRVYANRSGDPRSFNESVQFTVSNTINWSLEGTAQLTFGGKASAAMTVQLQQSLASS LAQMTANTHIQHNHRDNVGTEDQSLTATTTTNTVTETGTGSATGTGEEFAQLMLGITGAVGGSLTTSWTSNSSVSGSVAA ASRVETMVTQRRQIRQYIYQLPIDVAGYVALHYPLPVPVGDSPPQAPSTAKVNVIARNISSLSNLLPAGQSYRSTGMAET VSALAVEHTVFASEPISAANNALSIDRPHFL >Mature_351_residues MEMSTVTATAPTYGIDNGVRHLLTPQNLAELGLDWPTLQAFLASPSLQINGQSPDGISINESIFGNYSGPSAAVLGWMAY MNVGEPLIEERANVIQPPADTLSTRVYANRSGDPRSFNESVQFTVSNTINWSLEGTAQLTFGGKASAAMTVQLQQSLASS LAQMTANTHIQHNHRDNVGTEDQSLTATTTTNTVTETGTGSATGTGEEFAQLMLGITGAVGGSLTTSWTSNSSVSGSVAA ASRVETMVTQRRQIRQYIYQLPIDVAGYVALHYPLPVPVGDSPPQAPSTAKVNVIARNISSLSNLLPAGQSYRSTGMAET VSALAVEHTVFASEPISAANNALSIDRPHFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37017; Mature: 37017
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMSTVTATAPTYGIDNGVRHLLTPQNLAELGLDWPTLQAFLASPSLQINGQSPDGISIN CCCCEEEECCCCCCCCCCHHHHCCCHHHHHHCCCCHHHHHHHCCCCEEECCCCCCCCEEC ESIFGNYSGPSAAVLGWMAYMNVGEPLIEERANVIQPPADTLSTRVYANRSGDPRSFNES HHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHEEEEECCCCCCCCCCCC VQFTVSNTINWSLEGTAQLTFGGKASAAMTVQLQQSLASSLAQMTANTHIQHNHRDNVGT EEEEEECEEEEEECCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCEECCCCCCCCC EDQSLTATTTTNTVTETGTGSATGTGEEFAQLMLGITGAVGGSLTTSWTSNSSVSGSVAA CCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHH ASRVETMVTQRRQIRQYIYQLPIDVAGYVALHYPLPVPVGDSPPQAPSTAKVNVIARNIS HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHH SLSNLLPAGQSYRSTGMAETVSALAVEHTVFASEPISAANNALSIDRPHFL HHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCHHCCCCEECCCCCCC >Mature Secondary Structure MEMSTVTATAPTYGIDNGVRHLLTPQNLAELGLDWPTLQAFLASPSLQINGQSPDGISIN CCCCEEEECCCCCCCCCCHHHHCCCHHHHHHCCCCHHHHHHHCCCCEEECCCCCCCCEEC ESIFGNYSGPSAAVLGWMAYMNVGEPLIEERANVIQPPADTLSTRVYANRSGDPRSFNES HHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHEEEEECCCCCCCCCCCC VQFTVSNTINWSLEGTAQLTFGGKASAAMTVQLQQSLASSLAQMTANTHIQHNHRDNVGT EEEEEECEEEEEECCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCEECCCCCCCCC EDQSLTATTTTNTVTETGTGSATGTGEEFAQLMLGITGAVGGSLTTSWTSNSSVSGSVAA CCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHH ASRVETMVTQRRQIRQYIYQLPIDVAGYVALHYPLPVPVGDSPPQAPSTAKVNVIARNIS HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHH SLSNLLPAGQSYRSTGMAETVSALAVEHTVFASEPISAANNALSIDRPHFL HHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCHHCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA