| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is fhuA [H]
Identifier: 34497706
GI number: 34497706
Start: 2439157
End: 2441307
Strand: Direct
Name: fhuA [H]
Synonym: CV_2251
Alternate gene names: 34497706
Gene position: 2439157-2441307 (Clockwise)
Preceding gene: 34497704
Following gene: 34497707
Centisome position: 51.34
GC content: 65.97
Gene sequence:
>2151_bases ATGTGTAAATGCATTGCAACAATGCTTAATACTAATGATAATTATCATCATTATCAAATGCGTTTCGTCGCACCCCAAGA AGAAATGATGAACACAACCCGCCTTCTCCCCTCCTTGTTGCTGGCGCCGTGGCTGGCGGCGCCTGCCCATGCCGACGAGG CTTTCCAGCTGCAAACCGTGTCCGTCAGCGCCGCCGCCGGCGGGCAGGCTTACCAGTCCAGGCAGGCCGGCATCGCTGGC CAGCCCAGGGACGTGATCGACATTCCCCAGGCGGTGCAGAGCGTAGGCCCGCAAGTGCTGCGCGACCAGCAGGCGCGCTC CTTGGGCGACGCGCTGCGCAATGTCAGCGGCGTGGTGGAGTCCAATACCCTGGCGGGCATCCAGGACAGCTTCACTCGGC GCGGCTTCGGCAGCCGCGGCGACGGCAGCGTGCTGCGAGATGGCGTGCGCTCCGCGCTGCTGAACAATTTCGGCCCCACC ACCGAGTCGGTCGAAGTGCTGAAAGGACCGGCTTCGCTGCTGTACGGCATCCAGGAGCCGGGCGGGGTGATCAACGTGAT CAGCAAGAAGCCGCAGTTCGCGGACGAAGGCAGCGTCAGCGTCCGGGGCGGCAGCTTCGGCGGCGGCGCGGGTTTCGACC TGACCGGGCCGTTGAGCGATCATTTCGCCTACCGCTTGATCGGCGATCTGGACGAAAGCGGCTACTGGCGCAATTTCGGC AACAGCCGCCGCAAGCTGATCGCGCCGTCGCTAGCTTGGCAGGACGGCGCCGACCAGGCCTTGCTGGCCTACGAATACCA GGATTTTCTGACCCCGTATGACCGCGGCACCCTTTTCGTCAACGGCGCGCCGTTGAACATCCCGCGCGAGCGGCGGCTGG ACGAAGCCTGGAACGTGGCCCGGGGCACGTCGCAGTCGCTCAATCTCAGCCACACCCGCGAGCTTGGCGGCGCGTGGCAG CTGACCACCCGGCTGGGCTGGAACCAGCTGCGCTACAGCGACCGCCAGGCGAGGCCTTCCAGCTACAATGCCAAGACCGG CGAGTTGAAGCGCCGCGCCGACGGCAACGCCTACGACAACAGCGTGATGCTGTTTTCCAGCCGGCTGCAGGGCCGGCTGC AGCTGTTCGGCCAGATGCACGAACCGGTGGCGGGCGTGGAGGCGGAGCGGCGGCGTGAGCTGCGCGGCGACACCTACCGC GGGCGCGAGGTCGGCGGCTTCAACGTATACAACCCCGCATACGGCGGTTTGCCGTATCCCAGCCAGCTCAGCGCCGCGCA AAGCGACAACCGCAGCGATATCGACAGCCAGGCGCTGTTGCTGCAGGACAACTGGACGCTATCCGAGCGCTGGATCGCCA ATCTGGGCGCGCGCTACCAGCATTACCGGCAGGAGGACGGCGCAGGCAGGCCTTACGCGGTGACTGCCCGCAGCGGCGGC AGCCAGTTGCTGCCCCAGGCCGGCCTGCTGCACAAGCTGACGCCGCAGCTGTCGCTGTACGGCAGCTACAGCGAGTCGTT CAAACCCAATGCGGGCAGCGACGGCCAGAGTTTTTCGCCCGAGAAGGGCGCGTCTCGCGAAGTGGGCGTCAAGCTGGACC GCGACGGCCTGTCCGCCAGCCTGGCCGTTTACCACATCGAGAAAAGCAATGTGGTGGTGACCGAGAACAACGTCAGCCGC GCCGTCGGCAAGGCGCGCTCGCAGGGCGCGGAGGTGGATGTCAGCGGCCAGCTGACCCGCAGGCTGTCCGCCATCGCCAA TGTGGCCTACACCGACGCCAAGGTCACCGAGGACATCGCCGCCAATGTCGGCAAGCGCCTGTTCAATGTGCCGCGCCGCA GCGGTTCGTTGTCGCTGGCTTATGATTTCGGCGCCGACCGGCGGGGTCACCGCTGGCGCGCCGGCGGCGGCGCGCGCTAC GTGGGCGCGCGTCCCGGCGACAGCGCCAACAGCTTCGAGCTGCCGGCCTACTCGGTGGCCGACGCTTTCGTTTCCTGGCA GGGCAAGCTGGGGCGGAACCCCTTGTCGCTGCAACTCAATGTGAAGAATCTGTTCGACAAGACCTATTACACGTCCTCCA GCGGCAGCGCCCTTCAGGTCAGAGTGGGCGAACCCAGAGAGGTGGCTTTGCAGACGCGGCTGTCGTTCTGA
Upstream 100 bases:
>100_bases TCAGCAGAAGAAAGAGGGCGGCGCCAAGGCCTAGATAGCGGTGGAGCAGGATCAGGTAACGTTTCACAGGGGTGTCCAGC GGGTTGGGCCGGGAGGGCCG
Downstream 100 bases:
>100_bases CGCGGCTTGCCGTCGTCTATGGAAAGGCCCGGCGAAAACCGGGCCTTTTGCGTGGGCGGGCGATATCTGGCACATGGTAC AGGCCGGTCGACGGATGGGG
Product: ferrichrome-iron outermembrane receptor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 716; Mature: 716
Protein sequence:
>716_residues MCKCIATMLNTNDNYHHYQMRFVAPQEEMMNTTRLLPSLLLAPWLAAPAHADEAFQLQTVSVSAAAGGQAYQSRQAGIAG QPRDVIDIPQAVQSVGPQVLRDQQARSLGDALRNVSGVVESNTLAGIQDSFTRRGFGSRGDGSVLRDGVRSALLNNFGPT TESVEVLKGPASLLYGIQEPGGVINVISKKPQFADEGSVSVRGGSFGGGAGFDLTGPLSDHFAYRLIGDLDESGYWRNFG NSRRKLIAPSLAWQDGADQALLAYEYQDFLTPYDRGTLFVNGAPLNIPRERRLDEAWNVARGTSQSLNLSHTRELGGAWQ LTTRLGWNQLRYSDRQARPSSYNAKTGELKRRADGNAYDNSVMLFSSRLQGRLQLFGQMHEPVAGVEAERRRELRGDTYR GREVGGFNVYNPAYGGLPYPSQLSAAQSDNRSDIDSQALLLQDNWTLSERWIANLGARYQHYRQEDGAGRPYAVTARSGG SQLLPQAGLLHKLTPQLSLYGSYSESFKPNAGSDGQSFSPEKGASREVGVKLDRDGLSASLAVYHIEKSNVVVTENNVSR AVGKARSQGAEVDVSGQLTRRLSAIANVAYTDAKVTEDIAANVGKRLFNVPRRSGSLSLAYDFGADRRGHRWRAGGGARY VGARPGDSANSFELPAYSVADAFVSWQGKLGRNPLSLQLNVKNLFDKTYYTSSSGSALQVRVGEPREVALQTRLSF
Sequences:
>Translated_716_residues MCKCIATMLNTNDNYHHYQMRFVAPQEEMMNTTRLLPSLLLAPWLAAPAHADEAFQLQTVSVSAAAGGQAYQSRQAGIAG QPRDVIDIPQAVQSVGPQVLRDQQARSLGDALRNVSGVVESNTLAGIQDSFTRRGFGSRGDGSVLRDGVRSALLNNFGPT TESVEVLKGPASLLYGIQEPGGVINVISKKPQFADEGSVSVRGGSFGGGAGFDLTGPLSDHFAYRLIGDLDESGYWRNFG NSRRKLIAPSLAWQDGADQALLAYEYQDFLTPYDRGTLFVNGAPLNIPRERRLDEAWNVARGTSQSLNLSHTRELGGAWQ LTTRLGWNQLRYSDRQARPSSYNAKTGELKRRADGNAYDNSVMLFSSRLQGRLQLFGQMHEPVAGVEAERRRELRGDTYR GREVGGFNVYNPAYGGLPYPSQLSAAQSDNRSDIDSQALLLQDNWTLSERWIANLGARYQHYRQEDGAGRPYAVTARSGG SQLLPQAGLLHKLTPQLSLYGSYSESFKPNAGSDGQSFSPEKGASREVGVKLDRDGLSASLAVYHIEKSNVVVTENNVSR AVGKARSQGAEVDVSGQLTRRLSAIANVAYTDAKVTEDIAANVGKRLFNVPRRSGSLSLAYDFGADRRGHRWRAGGGARY VGARPGDSANSFELPAYSVADAFVSWQGKLGRNPLSLQLNVKNLFDKTYYTSSSGSALQVRVGEPREVALQTRLSF >Mature_716_residues MCKCIATMLNTNDNYHHYQMRFVAPQEEMMNTTRLLPSLLLAPWLAAPAHADEAFQLQTVSVSAAAGGQAYQSRQAGIAG QPRDVIDIPQAVQSVGPQVLRDQQARSLGDALRNVSGVVESNTLAGIQDSFTRRGFGSRGDGSVLRDGVRSALLNNFGPT TESVEVLKGPASLLYGIQEPGGVINVISKKPQFADEGSVSVRGGSFGGGAGFDLTGPLSDHFAYRLIGDLDESGYWRNFG NSRRKLIAPSLAWQDGADQALLAYEYQDFLTPYDRGTLFVNGAPLNIPRERRLDEAWNVARGTSQSLNLSHTRELGGAWQ LTTRLGWNQLRYSDRQARPSSYNAKTGELKRRADGNAYDNSVMLFSSRLQGRLQLFGQMHEPVAGVEAERRRELRGDTYR GREVGGFNVYNPAYGGLPYPSQLSAAQSDNRSDIDSQALLLQDNWTLSERWIANLGARYQHYRQEDGAGRPYAVTARSGG SQLLPQAGLLHKLTPQLSLYGSYSESFKPNAGSDGQSFSPEKGASREVGVKLDRDGLSASLAVYHIEKSNVVVTENNVSR AVGKARSQGAEVDVSGQLTRRLSAIANVAYTDAKVTEDIAANVGKRLFNVPRRSGSLSLAYDFGADRRGHRWRAGGGARY VGARPGDSANSFELPAYSVADAFVSWQGKLGRNPLSLQLNVKNLFDKTYYTSSSGSALQVRVGEPREVALQTRLSF
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=731, Percent_Identity=25.8549931600547, Blast_Score=151, Evalue=1e-37, Organism=Escherichia coli, GI1787344, Length=745, Percent_Identity=24.4295302013423, Blast_Score=120, Evalue=4e-28, Organism=Escherichia coli, GI1787024, Length=415, Percent_Identity=26.7469879518072, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI1787723, Length=738, Percent_Identity=25.0677506775068, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI1790743, Length=324, Percent_Identity=25.6172839506173, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 77991; Mature: 77991
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCKCIATMLNTNDNYHHYQMRFVAPQEEMMNTTRLLPSLLLAPWLAAPAHADEAFQLQTV CHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE SVSAAAGGQAYQSRQAGIAGQPRDVIDIPQAVQSVGPQVLRDQQARSLGDALRNVSGVVE EEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC SNTLAGIQDSFTRRGFGSRGDGSVLRDGVRSALLNNFGPTTESVEVLKGPASLLYGIQEP CCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCCCCC GGVINVISKKPQFADEGSVSVRGGSFGGGAGFDLTGPLSDHFAYRLIGDLDESGYWRNFG CCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC NSRRKLIAPSLAWQDGADQALLAYEYQDFLTPYDRGTLFVNGAPLNIPRERRLDEAWNVA CCCCEEECCCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHH RGTSQSLNLSHTRELGGAWQLTTRLGWNQLRYSDRQARPSSYNAKTGELKRRADGNAYDN CCCCCCCCCHHHHHCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCC SVMLFSSRLQGRLQLFGQMHEPVAGVEAERRRELRGDTYRGREVGGFNVYNPAYGGLPYP EEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SQLSAAQSDNRSDIDSQALLLQDNWTLSERWIANLGARYQHYRQEDGAGRPYAVTARSGG HHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC SQLLPQAGLLHKLTPQLSLYGSYSESFKPNAGSDGQSFSPEKGASREVGVKLDRDGLSAS CCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEE LAVYHIEKSNVVVTENNVSRAVGKARSQGAEVDVSGQLTRRLSAIANVAYTDAKVTEDIA EEEEEEECCCEEEECCCHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHCCHHHHHHHH ANVGKRLFNVPRRSGSLSLAYDFGADRRGHRWRAGGGARYVGARPGDSANSFELPAYSVA HHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCHHHHH DAFVSWQGKLGRNPLSLQLNVKNLFDKTYYTSSSGSALQVRVGEPREVALQTRLSF HHHHHCCCCCCCCCEEEEEEHHHHHHHHEEECCCCCEEEEEECCCHHHHHHHHCCC >Mature Secondary Structure MCKCIATMLNTNDNYHHYQMRFVAPQEEMMNTTRLLPSLLLAPWLAAPAHADEAFQLQTV CHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE SVSAAAGGQAYQSRQAGIAGQPRDVIDIPQAVQSVGPQVLRDQQARSLGDALRNVSGVVE EEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC SNTLAGIQDSFTRRGFGSRGDGSVLRDGVRSALLNNFGPTTESVEVLKGPASLLYGIQEP CCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCCCCC GGVINVISKKPQFADEGSVSVRGGSFGGGAGFDLTGPLSDHFAYRLIGDLDESGYWRNFG CCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC NSRRKLIAPSLAWQDGADQALLAYEYQDFLTPYDRGTLFVNGAPLNIPRERRLDEAWNVA CCCCEEECCCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHH RGTSQSLNLSHTRELGGAWQLTTRLGWNQLRYSDRQARPSSYNAKTGELKRRADGNAYDN CCCCCCCCCHHHHHCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCC SVMLFSSRLQGRLQLFGQMHEPVAGVEAERRRELRGDTYRGREVGGFNVYNPAYGGLPYP EEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SQLSAAQSDNRSDIDSQALLLQDNWTLSERWIANLGARYQHYRQEDGAGRPYAVTARSGG HHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC SQLLPQAGLLHKLTPQLSLYGSYSESFKPNAGSDGQSFSPEKGASREVGVKLDRDGLSAS CCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEE LAVYHIEKSNVVVTENNVSRAVGKARSQGAEVDVSGQLTRRLSAIANVAYTDAKVTEDIA EEEEEEECCCEEEECCCHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHCCHHHHHHHH ANVGKRLFNVPRRSGSLSLAYDFGADRRGHRWRAGGGARYVGARPGDSANSFELPAYSVA HHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCHHHHH DAFVSWQGKLGRNPLSLQLNVKNLFDKTYYTSSSGSALQVRVGEPREVALQTRLSF HHHHHCCCCCCCCCEEEEEEHHHHHHHHEEECCCCCEEEEEECCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]