| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497693
Identifier: 34497693
GI number: 34497693
Start: 2423995
End: 2424651
Strand: Reverse
Name: 34497693
Synonym: CV_2238
Alternate gene names: NA
Gene position: 2424651-2423995 (Counterclockwise)
Preceding gene: 34497694
Following gene: 34497691
Centisome position: 51.03
GC content: 57.99
Gene sequence:
>657_bases TTGAAAGCGCCATCGAAAACTTGCCGGCTAGACGCCGCACAAACCTCGGCTTCCCTCATGAAAAAAATCACTGCCTTCTT CTGCCTCTGCTTGCTCTCCCCTTTTTCTTTCGCCGACGAACCAGCCTGTCTTGACGACTTGGCCGGCACCTTTCAGGGCG CGATCGGCCGCAGCGCGCCGGAATCGGTTCTTACGGTGAAGCATGGCCAGGACGGCTGGGAATTCAGCCTGCCGGAGGGC GCGGAATACGATAAGGACTCGCTTTTCCGCTATCACTTCGACCGCGCAAAAACGCTGCAGGCCAACTCCATCACCGGAGA CAGCCTGCAATATGTCGGCTACACCATGCTGACGCCATTTTTAGAAAAGAACATCACGCTGGACAAGATCAAGATCGAGT GCGGCCTGGCCGTCGACGGGATGTTCCTGGTCAGAATGGACCTGGCCCAGGCAGACGGCAGGCTCCTGCAAAACATGGCC ATGCTGAGCAGCGTGATGGCGGGCAACAAGCCCGGCGTCAAGATAGACGACAGGCAGGTCAAAAAACTGCGGGGCATCCA GTACTTTGCCGGTGAATCGCTGCAGCTGGACGGCGTCATCAATACCATCACGCCGTTCCTGGTGCAGAAATCCGCGGGCG CCGGACAGACCCATTAG
Upstream 100 bases:
>100_bases CAAACGCCCAGGCAAGACATTCTCATTGCCAATGGCTTGATTCACAGATACCTTCCAAAGCTTTTGCCGACCGCGCCGAA TCGCTCCAGCCATTCAGGGA
Downstream 100 bases:
>100_bases CATCGGCCAGATACGCGGCGCATGAAAAAAGCGGACCCTGGGTCCGCTTTTTTCATGACTCCCGCCTCAGGCTCAAGAGC CCGCCGCCTGCTCCGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKAPSKTCRLDAAQTSASLMKKITAFFCLCLLSPFSFADEPACLDDLAGTFQGAIGRSAPESVLTVKHGQDGWEFSLPEG AEYDKDSLFRYHFDRAKTLQANSITGDSLQYVGYTMLTPFLEKNITLDKIKIECGLAVDGMFLVRMDLAQADGRLLQNMA MLSSVMAGNKPGVKIDDRQVKKLRGIQYFAGESLQLDGVINTITPFLVQKSAGAGQTH
Sequences:
>Translated_218_residues MKAPSKTCRLDAAQTSASLMKKITAFFCLCLLSPFSFADEPACLDDLAGTFQGAIGRSAPESVLTVKHGQDGWEFSLPEG AEYDKDSLFRYHFDRAKTLQANSITGDSLQYVGYTMLTPFLEKNITLDKIKIECGLAVDGMFLVRMDLAQADGRLLQNMA MLSSVMAGNKPGVKIDDRQVKKLRGIQYFAGESLQLDGVINTITPFLVQKSAGAGQTH >Mature_218_residues MKAPSKTCRLDAAQTSASLMKKITAFFCLCLLSPFSFADEPACLDDLAGTFQGAIGRSAPESVLTVKHGQDGWEFSLPEG AEYDKDSLFRYHFDRAKTLQANSITGDSLQYVGYTMLTPFLEKNITLDKIKIECGLAVDGMFLVRMDLAQADGRLLQNMA MLSSVMAGNKPGVKIDDRQVKKLRGIQYFAGESLQLDGVINTITPFLVQKSAGAGQTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23787; Mature: 23787
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAPSKTCRLDAAQTSASLMKKITAFFCLCLLSPFSFADEPACLDDLAGTFQGAIGRSAP CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC ESVLTVKHGQDGWEFSLPEGAEYDKDSLFRYHFDRAKTLQANSITGDSLQYVGYTMLTPF CCEEEEECCCCCCEECCCCCCCCCCHHHHHHHHCHHHEEECCCCCCCCHHHHHHHHHHHH LEKNITLDKIKIECGLAVDGMFLVRMDLAQADGRLLQNMAMLSSVMAGNKPGVKIDDRQV HHCCCEEEEEEEEECCEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHH KKLRGIQYFAGESLQLDGVINTITPFLVQKSAGAGQTH HHHHCCCEECCCCEEECCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKAPSKTCRLDAAQTSASLMKKITAFFCLCLLSPFSFADEPACLDDLAGTFQGAIGRSAP CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC ESVLTVKHGQDGWEFSLPEGAEYDKDSLFRYHFDRAKTLQANSITGDSLQYVGYTMLTPF CCEEEEECCCCCCEECCCCCCCCCCHHHHHHHHCHHHEEECCCCCCCCHHHHHHHHHHHH LEKNITLDKIKIECGLAVDGMFLVRMDLAQADGRLLQNMAMLSSVMAGNKPGVKIDDRQV HHCCCEEEEEEEEECCEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHH KKLRGIQYFAGESLQLDGVINTITPFLVQKSAGAGQTH HHHHCCCEECCCCEEECCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA