| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is nasA [H]
Identifier: 34497683
GI number: 34497683
Start: 2402723
End: 2403925
Strand: Direct
Name: nasA [H]
Synonym: CV_2228
Alternate gene names: 34497683
Gene position: 2402723-2403925 (Clockwise)
Preceding gene: 34497682
Following gene: 34497684
Centisome position: 50.57
GC content: 72.07
Gene sequence:
>1203_bases ATGGACCGTACCTTCTGGCAGGCCGGGCACCGGCCGACGCTGGTTTCCGCCTTTCTGTACTTCGATCTGAGCTTCATGGC CTGGTATCTGCTGGGACCGCTGCAGGTGCCCATCGCCGCCGCGCTGCAGCTTTCCACCCAGCAGCGCGGCCTGATGGTGG CCACGCCCATCCTGGCCGGCGCGCTGCTGCGCCCGCTGATGGGCATGCTGGTGGACCGCATCGGCGCCAAGCGCGCCGGG CTGCTCGGCCAGATCGTCGTCATCGCCGCGTTGCTCGGCGCCTGGCTCGCTAATCTGTCCAGCTTGGGCGGCATGCTGGC CTTGGGCGCGCTGCTGGGCGTGGCCGGGGCCTCGTTCGCCGCCGCCTTGCCGCTGGCTTCGCGCTGGTATCCGCCGCGGC ACCAGGGCACGGCGCTGGGCATCGCCGGGGCGGGCAATTCCGGCACCGTGCTGGCGGCGCTGTTCGCGCCGGCGCTGGCC GCGGCCTTCGGCTGGCGCAATGTGTTCGGCCTGGCCTGCCTGCCCTTGCTGCTGGTGCTGGCGATCTACGCGGTCTGGGC CAGGGAGGCGCCGGCCGCGGCGGGGCCCAAGCGCCTGTCCGACTACCTCTCCGTGCTGAAGGAGAAGGACGCCTGGTGGT TCATGTTCTTCTACTCGATGACCTTCGGCGGTTTTGCCGGCTTCGCCGGCGCCTTGCCCGGCTATTTCCATGACCAGTTC GGCTTCGACGCCAAAGCCGCCGGCCTCTACACCGCCGCCTGCGTGTTCGCCGGCTCGGTGATGCGGCCCTTGGGCGGCAT GCTGGCCGACCGCATGGGTGGAACCCGCTCGCTGCTGGCGGTCTATCTGGCATGCGCGCTGTTGATGGCCGCCGCCGCGC TGAACGCCGGCGGCGCTGGCGCGGCGCTGGCCCTGTTCGTGCTGGCCATGCTGTGCCTGGGCGCCGGCAACGGCGCGGTG TTCCAGCTGGTGCCGCAGCGCTTCGGCCGGGAGCTGGGCGTGATGACCGGCCTGGTGGGCATGGCCGGCGGCATCGGCGG CTTCCTGCTGGCGGCCGGGCTGGGCGCGGTCAAGCAGGCCAGCGGCGATTACGCGCCGGGCTTGTGGCTGTTCGCGGGCC TCTGCCTGCTGGCCTGGCTCAGCCTGGCGGGCGTGCAGCGGCATTGGCGCGACAACTGGGCGGTGGCGGCCGCCCGCGTG TGA
Upstream 100 bases:
>100_bases CACTAGGGACAACGGCGTCCTCTCCTGTTTTGATGACGGGAGGGGGCGCCGTTTTGTTTTGACGATCTGCATGCAAACCA TATGCATGCCGGGAGCGATC
Downstream 100 bases:
>100_bases GGGGACAGGCATGGACATGGCCGCGCGGTGGCTTGCCCGCTACACGGCTGGAACATAGACCTGGCCAGCGGCGAGGCGCA GGCGCCGGACAGCGGCTGCG
Product: nitrate/nitrite transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MDRTFWQAGHRPTLVSAFLYFDLSFMAWYLLGPLQVPIAAALQLSTQQRGLMVATPILAGALLRPLMGMLVDRIGAKRAG LLGQIVVIAALLGAWLANLSSLGGMLALGALLGVAGASFAAALPLASRWYPPRHQGTALGIAGAGNSGTVLAALFAPALA AAFGWRNVFGLACLPLLLVLAIYAVWAREAPAAAGPKRLSDYLSVLKEKDAWWFMFFYSMTFGGFAGFAGALPGYFHDQF GFDAKAAGLYTAACVFAGSVMRPLGGMLADRMGGTRSLLAVYLACALLMAAAALNAGGAGAALALFVLAMLCLGAGNGAV FQLVPQRFGRELGVMTGLVGMAGGIGGFLLAAGLGAVKQASGDYAPGLWLFAGLCLLAWLSLAGVQRHWRDNWAVAAARV
Sequences:
>Translated_400_residues MDRTFWQAGHRPTLVSAFLYFDLSFMAWYLLGPLQVPIAAALQLSTQQRGLMVATPILAGALLRPLMGMLVDRIGAKRAG LLGQIVVIAALLGAWLANLSSLGGMLALGALLGVAGASFAAALPLASRWYPPRHQGTALGIAGAGNSGTVLAALFAPALA AAFGWRNVFGLACLPLLLVLAIYAVWAREAPAAAGPKRLSDYLSVLKEKDAWWFMFFYSMTFGGFAGFAGALPGYFHDQF GFDAKAAGLYTAACVFAGSVMRPLGGMLADRMGGTRSLLAVYLACALLMAAAALNAGGAGAALALFVLAMLCLGAGNGAV FQLVPQRFGRELGVMTGLVGMAGGIGGFLLAAGLGAVKQASGDYAPGLWLFAGLCLLAWLSLAGVQRHWRDNWAVAAARV >Mature_400_residues MDRTFWQAGHRPTLVSAFLYFDLSFMAWYLLGPLQVPIAAALQLSTQQRGLMVATPILAGALLRPLMGMLVDRIGAKRAG LLGQIVVIAALLGAWLANLSSLGGMLALGALLGVAGASFAAALPLASRWYPPRHQGTALGIAGAGNSGTVLAALFAPALA AAFGWRNVFGLACLPLLLVLAIYAVWAREAPAAAGPKRLSDYLSVLKEKDAWWFMFFYSMTFGGFAGFAGALPGYFHDQF GFDAKAAGLYTAACVFAGSVMRPLGGMLADRMGGTRSLLAVYLACALLMAAAALNAGGAGAALALFVLAMLCLGAGNGAV FQLVPQRFGRELGVMTGLVGMAGGIGGFLLAAGLGAVKQASGDYAPGLWLFAGLCLLAWLSLAGVQRHWRDNWAVAAARV
Specific function: May function as a nitrate transporter [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787475, Length=410, Percent_Identity=27.8048780487805, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787743, Length=348, Percent_Identity=29.0229885057471, Blast_Score=72, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004737 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41417; Mature: 41417
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRTFWQAGHRPTLVSAFLYFDLSFMAWYLLGPLQVPIAAALQLSTQQRGLMVATPILAG CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEHHHHHHH ALLRPLMGMLVDRIGAKRAGLLGQIVVIAALLGAWLANLSSLGGMLALGALLGVAGASFA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALPLASRWYPPRHQGTALGIAGAGNSGTVLAALFAPALAAAFGWRNVFGLACLPLLLVL HHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIYAVWAREAPAAAGPKRLSDYLSVLKEKDAWWFMFFYSMTFGGFAGFAGALPGYFHDQF HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHC GFDAKAAGLYTAACVFAGSVMRPLGGMLADRMGGTRSLLAVYLACALLMAAAALNAGGAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCH AALALFVLAMLCLGAGNGAVFQLVPQRFGRELGVMTGLVGMAGGIGGFLLAAGLGAVKQA HHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC SGDYAPGLWLFAGLCLLAWLSLAGVQRHWRDNWAVAAARV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure MDRTFWQAGHRPTLVSAFLYFDLSFMAWYLLGPLQVPIAAALQLSTQQRGLMVATPILAG CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEHHHHHHH ALLRPLMGMLVDRIGAKRAGLLGQIVVIAALLGAWLANLSSLGGMLALGALLGVAGASFA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALPLASRWYPPRHQGTALGIAGAGNSGTVLAALFAPALAAAFGWRNVFGLACLPLLLVL HHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIYAVWAREAPAAAGPKRLSDYLSVLKEKDAWWFMFFYSMTFGGFAGFAGALPGYFHDQF HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHC GFDAKAAGLYTAACVFAGSVMRPLGGMLADRMGGTRSLLAVYLACALLMAAAALNAGGAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCH AALALFVLAMLCLGAGNGAVFQLVPQRFGRELGVMTGLVGMAGGIGGFLLAAGLGAVKQA HHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC SGDYAPGLWLFAGLCLLAWLSLAGVQRHWRDNWAVAAARV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7868621; 8969502; 9384377 [H]