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The map label for this gene is nasT [H]

Identifier: 34497681

GI number: 34497681

Start: 2401488

End: 2402078

Strand: Direct

Name: nasT [H]

Synonym: CV_2226

Alternate gene names: 34497681

Gene position: 2401488-2402078 (Clockwise)

Preceding gene: 34497680

Following gene: 34497682

Centisome position: 50.55

GC content: 69.88

Gene sequence:

>591_bases
ATGGACCCGTCCGTCCCCTTGAGGCTGTGGTTGGTCAACGACACCGACCGCCCGATGCGGCAGCTGCGCGAGGCCTTCGC
CAGCGCCGGCTACCGGGCCATCGCCCAGGCGGACGGCGCGGCCGAGCTGCTGCGCCTGGCGGAGTCGCAGCGGCCGGACG
TCATCATCGTCGATACCGAATCGCCGACGCGCGACACGCTGGAGCAATTGGCGCTGATGGACCGCGCCGCGCCGCGGCCG
GTGGTGATGTTCGCCGGGCACGGCGGATTGCCCGCCATCCAGGCCGCGGTGCGCGCCGGGGTCACCGCCTACATCGTCGA
TCACGTTTCCGCGGAGCGGCTGGCGCCCATCATCGACATGGCCAGGGTCAAGTTCGAAGAGGACGCCAGGCTGAAGCGCA
AGCTGGCCGAGATGGAGCAGCGGCTGGCGGATCGCAAGCTGATCGAGCGGGCCAAGGGCATCCTGATGCGGCGGCGCCAG
CTGGACGAAGAGGAGGCCTACGCGCTGCTGCGCCGCCAGGCGATGAAATCCGGCCTGTGCCTCGCCGAGCTGTCCCGCCA
ACTGATTCACGCCAGCGAGCTGCTGGATTGA

Upstream 100 bases:

>100_bases
TTGACGCGACGCCCGCTCACGCGGGCGTTTTTGCGTCGTCCCGGCATTCGGGCATGGGGTTTGCTTTTATTTCCCGCAGA
CCCATTCCGCGAATGAGAGC

Downstream 100 bases:

>100_bases
AAGGCCGCGATGAAAACCGACATCCATGCTGAAGACAGCCGCCTGGCGCAGATTCGCGTCGGCTTCCTGCCGCTGACCGA
CTGCGCGCCGATTGCCGTCG

Product: response regulator NasT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MDPSVPLRLWLVNDTDRPMRQLREAFASAGYRAIAQADGAAELLRLAESQRPDVIIVDTESPTRDTLEQLALMDRAAPRP
VVMFAGHGGLPAIQAAVRAGVTAYIVDHVSAERLAPIIDMARVKFEEDARLKRKLAEMEQRLADRKLIERAKGILMRRRQ
LDEEEAYALLRRQAMKSGLCLAELSRQLIHASELLD

Sequences:

>Translated_196_residues
MDPSVPLRLWLVNDTDRPMRQLREAFASAGYRAIAQADGAAELLRLAESQRPDVIIVDTESPTRDTLEQLALMDRAAPRP
VVMFAGHGGLPAIQAAVRAGVTAYIVDHVSAERLAPIIDMARVKFEEDARLKRKLAEMEQRLADRKLIERAKGILMRRRQ
LDEEEAYALLRRQAMKSGLCLAELSRQLIHASELLD
>Mature_196_residues
MDPSVPLRLWLVNDTDRPMRQLREAFASAGYRAIAQADGAAELLRLAESQRPDVIIVDTESPTRDTLEQLALMDRAAPRP
VVMFAGHGGLPAIQAAVRAGVTAYIVDHVSAERLAPIIDMARVKFEEDARLKRKLAEMEQRLADRKLIERAKGILMRRRQ
LDEEEAYALLRRQAMKSGLCLAELSRQLIHASELLD

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 21991; Mature: 21991

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPSVPLRLWLVNDTDRPMRQLREAFASAGYRAIAQADGAAELLRLAESQRPDVIIVDTE
CCCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCEEEEECC
SPTRDTLEQLALMDRAAPRPVVMFAGHGGLPAIQAAVRAGVTAYIVDHVSAERLAPIIDM
CCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
ARVKFEEDARLKRKLAEMEQRLADRKLIERAKGILMRRRQLDEEEAYALLRRQAMKSGLC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCH
LAELSRQLIHASELLD
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDPSVPLRLWLVNDTDRPMRQLREAFASAGYRAIAQADGAAELLRLAESQRPDVIIVDTE
CCCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCEEEEECC
SPTRDTLEQLALMDRAAPRPVVMFAGHGGLPAIQAAVRAGVTAYIVDHVSAERLAPIIDM
CCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
ARVKFEEDARLKRKLAEMEQRLADRKLIERAKGILMRRRQLDEEEAYALLRRQAMKSGLC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCH
LAELSRQLIHASELLD
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]