| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497674
Identifier: 34497674
GI number: 34497674
Start: 2392593
End: 2394476
Strand: Direct
Name: 34497674
Synonym: CV_2219
Alternate gene names: NA
Gene position: 2392593-2394476 (Clockwise)
Preceding gene: 34497673
Following gene: 34497675
Centisome position: 50.36
GC content: 64.6
Gene sequence:
>1884_bases ATGGACAAGACTCGTTGCGCGGAGTGTGGCGTGCGCTGGTTCCAGCGTTTCATCTGGATCGGCATCGCCATGAACATGGT ATTCGCGATACCGGCGCTGTTCTGGCCGGACTTCCTGAACAGCAGCTTCGGCCTGCCAAGCCAGGCGGTGTATCCGTGGC TGCAGAACGCCGGCATGCTGCTGGTCGGCGTCAGCCTGTTTTACGCGCCGGCCGGCGTCAGCGCCGTCCGCTACCCGGTG TATTCCTGGCTGTGCGTGCTGTCCCGGCTGATCGCGGTGGTGTTCTGGATCTACCTGATCCAGACCTCGGGCTATCCGGA CGCCTTCAAGCCGCTGCTGTATTCCGACGCCGCGATGTTCGTCATCCTGGGCGCCTTGTTGTACATCGGCCTGCCGGACC AGCGCCCATGGCCGCTGATCCGCGCCGGCCTGTGCGGCTTGTGGCGCTGCGTGGCCAAGTGTTTTTCCGGCGCCCGCCGC AAGATCGCCATCGCCGTGGTGCTGGTGTTGGCCTTCGTCGGCTACGAGGCTTGGGCCAATCTGCTGCGCGAGGTGCCGCA GCCGCCCATCCAGTCCGATGTCGACCACTTCAAGTACGCGGCGATAGGCCTGGGGCCGGACGCGCGCATTCCCTTGTATG TGTTCTCGGTGCTGCCGCAGGTGTGCGCTGCCCGCATGCCCAGGCTCGGCACCGGCTGGCAGGCGTTCGGTTTCATTTAC GAAGGCGGGCATGATCTGCCCATAGGCCTGGCCAAGCGGCAGATAGGCTACCCGTCGGTGGAGCCCAATTGCGCGCTGTG CCATACCGGCATGTACCGCAAGAGCGCCGACGACGTGCCGGTGCCGGTGCCCACCGCGCCGGCGGCGCTGCTCAACCTGG AGTCGTTCCAGTGGTTCCTGTACGACTGCGCCGGCGATCCGGACTTCAACGCCAAGGTGATGAACGCCATCGAGCAGCAT TACGACCTGGGTCCGATAGAAAAGCTGTTCTACCGCTTCCTGATCGTGCCGGCCACGCGCCAGGCCTTCCTGAAGCAGAA GCAACAGTATGCGTGGCAGAAGCTGCGGCCGGTTCAGGGACCGGGCCGCACCGATACCTTCAACCCCACCAAGATGGCGG TGTTCGGCTTCCCCGACGACTCCACCATCGGCACCGTCGACCTGCCGCAGATCTGGAACCAGAAGCCGCGCGAGTCGCTG TACCTGCACTGGGACGGCAACAACAACGACATCAAGGAGCGCAATTACGCGGCGGCGATGGCAGTGGGCGCGACGCCGCA GTCGGTGCTGCCGGCCGAATTCAAGCGCGTGACCGACTGGCTGCTCGCGCATCCTTCGCCCAAGTGGCCGTTCGGCGGCC TGGATCAGGTGCGCGCGCACCGCGGCCAGGCGCTGTGGGAGAAGAATTGCGCCGGCTGCCATGACTTCGGCAAGGCCGAT ACCGGGCAGGTGACGGTGGGGCTGGACGAGCTGGGCACCGACCCCTACCGCGTCAACTCCTTCACCGTCGGCCTGGTGGA CAAGTTCCACGAGTTCAAGAAGCCGCCGTTCGACTTCGGCGCGTACCGCAAGACGCAAAGCTACAGCAATACGCCGACCG ACGGCATCTGGCTGCGCGCGCCTTACCTGCACAACGGCTCGGTGCCGACGCTGTGGGACCTGCTGCAGAAGCCGGACAAG CGGCCCAAGGCGTTCTATCGCGGCTCCAGCGTATTCGACACCCGCAACGTCGGCTTCATTACAGCCGGACCGGAGGTCAA GGGCGGCGGTTATTTCAAGTTCGACACCCGTCTGCCGGGCAACCACAACACCGGCCACGAGTACGGAACCGATCTGTCCG ACAGCGAGAAGTGGGATCTGATCGAGTACATGAAAACCTTGTGA
Upstream 100 bases:
>100_bases TCTGGACAAGACCGCAGGCGGCTGAGGCGGAAGCGCCGGGGCCGCTGTCCGGTCCCGGCCGCGCCTGGCCATTCGACGCC GTCTTCACAAGGACATCTTC
Downstream 100 bases:
>100_bases GCGGTAAGCACCGGATAGCGAGCGGAGGCGGAAATGGGCATGTTCGACGATTGGCGCAAGCGGGTAGAGGATGATCTCGT CGGCGCGCAGCAAGCGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 627; Mature: 627
Protein sequence:
>627_residues MDKTRCAECGVRWFQRFIWIGIAMNMVFAIPALFWPDFLNSSFGLPSQAVYPWLQNAGMLLVGVSLFYAPAGVSAVRYPV YSWLCVLSRLIAVVFWIYLIQTSGYPDAFKPLLYSDAAMFVILGALLYIGLPDQRPWPLIRAGLCGLWRCVAKCFSGARR KIAIAVVLVLAFVGYEAWANLLREVPQPPIQSDVDHFKYAAIGLGPDARIPLYVFSVLPQVCAARMPRLGTGWQAFGFIY EGGHDLPIGLAKRQIGYPSVEPNCALCHTGMYRKSADDVPVPVPTAPAALLNLESFQWFLYDCAGDPDFNAKVMNAIEQH YDLGPIEKLFYRFLIVPATRQAFLKQKQQYAWQKLRPVQGPGRTDTFNPTKMAVFGFPDDSTIGTVDLPQIWNQKPRESL YLHWDGNNNDIKERNYAAAMAVGATPQSVLPAEFKRVTDWLLAHPSPKWPFGGLDQVRAHRGQALWEKNCAGCHDFGKAD TGQVTVGLDELGTDPYRVNSFTVGLVDKFHEFKKPPFDFGAYRKTQSYSNTPTDGIWLRAPYLHNGSVPTLWDLLQKPDK RPKAFYRGSSVFDTRNVGFITAGPEVKGGGYFKFDTRLPGNHNTGHEYGTDLSDSEKWDLIEYMKTL
Sequences:
>Translated_627_residues MDKTRCAECGVRWFQRFIWIGIAMNMVFAIPALFWPDFLNSSFGLPSQAVYPWLQNAGMLLVGVSLFYAPAGVSAVRYPV YSWLCVLSRLIAVVFWIYLIQTSGYPDAFKPLLYSDAAMFVILGALLYIGLPDQRPWPLIRAGLCGLWRCVAKCFSGARR KIAIAVVLVLAFVGYEAWANLLREVPQPPIQSDVDHFKYAAIGLGPDARIPLYVFSVLPQVCAARMPRLGTGWQAFGFIY EGGHDLPIGLAKRQIGYPSVEPNCALCHTGMYRKSADDVPVPVPTAPAALLNLESFQWFLYDCAGDPDFNAKVMNAIEQH YDLGPIEKLFYRFLIVPATRQAFLKQKQQYAWQKLRPVQGPGRTDTFNPTKMAVFGFPDDSTIGTVDLPQIWNQKPRESL YLHWDGNNNDIKERNYAAAMAVGATPQSVLPAEFKRVTDWLLAHPSPKWPFGGLDQVRAHRGQALWEKNCAGCHDFGKAD TGQVTVGLDELGTDPYRVNSFTVGLVDKFHEFKKPPFDFGAYRKTQSYSNTPTDGIWLRAPYLHNGSVPTLWDLLQKPDK RPKAFYRGSSVFDTRNVGFITAGPEVKGGGYFKFDTRLPGNHNTGHEYGTDLSDSEKWDLIEYMKTL >Mature_627_residues MDKTRCAECGVRWFQRFIWIGIAMNMVFAIPALFWPDFLNSSFGLPSQAVYPWLQNAGMLLVGVSLFYAPAGVSAVRYPV YSWLCVLSRLIAVVFWIYLIQTSGYPDAFKPLLYSDAAMFVILGALLYIGLPDQRPWPLIRAGLCGLWRCVAKCFSGARR KIAIAVVLVLAFVGYEAWANLLREVPQPPIQSDVDHFKYAAIGLGPDARIPLYVFSVLPQVCAARMPRLGTGWQAFGFIY EGGHDLPIGLAKRQIGYPSVEPNCALCHTGMYRKSADDVPVPVPTAPAALLNLESFQWFLYDCAGDPDFNAKVMNAIEQH YDLGPIEKLFYRFLIVPATRQAFLKQKQQYAWQKLRPVQGPGRTDTFNPTKMAVFGFPDDSTIGTVDLPQIWNQKPRESL YLHWDGNNNDIKERNYAAAMAVGATPQSVLPAEFKRVTDWLLAHPSPKWPFGGLDQVRAHRGQALWEKNCAGCHDFGKAD TGQVTVGLDELGTDPYRVNSFTVGLVDKFHEFKKPPFDFGAYRKTQSYSNTPTDGIWLRAPYLHNGSVPTLWDLLQKPDK RPKAFYRGSSVFDTRNVGFITAGPEVKGGGYFKFDTRLPGNHNTGHEYGTDLSDSEKWDLIEYMKTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70378; Mature: 70378
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKTRCAECGVRWFQRFIWIGIAMNMVFAIPALFWPDFLNSSFGLPSQAVYPWLQNAGML CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHH LVGVSLFYAPAGVSAVRYPVYSWLCVLSRLIAVVFWIYLIQTSGYPDAFKPLLYSDAAMF HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH VILGALLYIGLPDQRPWPLIRAGLCGLWRCVAKCFSGARRKIAIAVVLVLAFVGYEAWAN HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LLREVPQPPIQSDVDHFKYAAIGLGPDARIPLYVFSVLPQVCAARMPRLGTGWQAFGFIY HHHHCCCCCCHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEEEEE EGGHDLPIGLAKRQIGYPSVEPNCALCHTGMYRKSADDVPVPVPTAPAALLNLESFQWFL ECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCEEEE YDCAGDPDFNAKVMNAIEQHYDLGPIEKLFYRFLIVPATRQAFLKQKQQYAWQKLRPVQG EECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC PGRTDTFNPTKMAVFGFPDDSTIGTVDLPQIWNQKPRESLYLHWDGNNNDIKERNYAAAM CCCCCCCCCCEEEEEECCCCCCCCCEECHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHE AVGATPQSVLPAEFKRVTDWLLAHPSPKWPFGGLDQVRAHRGQALWEKNCAGCHDFGKAD EECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCHHHHHCCCCCCHHCCCCC TGQVTVGLDELGTDPYRVNSFTVGLVDKFHEFKKPPFDFGAYRKTQSYSNTPTDGIWLRA CCEEEEEHHHHCCCCEEECEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEC PYLHNGSVPTLWDLLQKPDKRPKAFYRGSSVFDTRNVGFITAGPEVKGGGYFKFDTRLPG CCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCC NHNTGHEYGTDLSDSEKWDLIEYMKTL CCCCCCCCCCCCCCCCCHHHHHHHHHC >Mature Secondary Structure MDKTRCAECGVRWFQRFIWIGIAMNMVFAIPALFWPDFLNSSFGLPSQAVYPWLQNAGML CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHH LVGVSLFYAPAGVSAVRYPVYSWLCVLSRLIAVVFWIYLIQTSGYPDAFKPLLYSDAAMF HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH VILGALLYIGLPDQRPWPLIRAGLCGLWRCVAKCFSGARRKIAIAVVLVLAFVGYEAWAN HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LLREVPQPPIQSDVDHFKYAAIGLGPDARIPLYVFSVLPQVCAARMPRLGTGWQAFGFIY HHHHCCCCCCHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEEEEE EGGHDLPIGLAKRQIGYPSVEPNCALCHTGMYRKSADDVPVPVPTAPAALLNLESFQWFL ECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCEEEE YDCAGDPDFNAKVMNAIEQHYDLGPIEKLFYRFLIVPATRQAFLKQKQQYAWQKLRPVQG EECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC PGRTDTFNPTKMAVFGFPDDSTIGTVDLPQIWNQKPRESLYLHWDGNNNDIKERNYAAAM CCCCCCCCCCEEEEEECCCCCCCCCEECHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHE AVGATPQSVLPAEFKRVTDWLLAHPSPKWPFGGLDQVRAHRGQALWEKNCAGCHDFGKAD EECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCHHHHHCCCCCCHHCCCCC TGQVTVGLDELGTDPYRVNSFTVGLVDKFHEFKKPPFDFGAYRKTQSYSNTPTDGIWLRA CCEEEEEHHHHCCCCEEECEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEC PYLHNGSVPTLWDLLQKPDKRPKAFYRGSSVFDTRNVGFITAGPEVKGGGYFKFDTRLPG CCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCC NHNTGHEYGTDLSDSEKWDLIEYMKTL CCCCCCCCCCCCCCCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]