| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497586
Identifier: 34497586
GI number: 34497586
Start: 2316802
End: 2317251
Strand: Reverse
Name: 34497586
Synonym: CV_2131
Alternate gene names: NA
Gene position: 2317251-2316802 (Counterclockwise)
Preceding gene: 34497587
Following gene: 34497585
Centisome position: 48.77
GC content: 69.56
Gene sequence:
>450_bases ATGCGCTACTGCACCCTGGCCGACCTGCAGCTGGCCATCCCGCAGGCCACCCTGACCCAGCTCACCAACGACGTCCCCGC CGATTACAGCGTGGCCCAGGAGCCGAACCTGGCCGTGGTGGAGGAAGCGGTGCGCCAGGCCGAGGAGCTGGTGGACGCGC ATCTGCGCGGCCGCTACGTGCTGCCGCTGGTCACGGTGCCGTCGGTGATCAAGGACAACACCGTCAACCTGGCGCGGCAC TGGCTGTATGCGCGGCGGCCGGAGGGGAACGAGCTGCCGGACGCTGTCACCCGCACCTACAAGGCGGCGCTGCAGATCCT GGAATCCATCCGCGATGGCAAGCTACATATCGGCGTGCCTACCGGCGAGGCCGCTCCGGAGCCGGGCGAGGTCCGAGTCC GGGCGCGGCGCCAGCTGTTCAGCGCATCGATGCTGGAGCGCTACCGCTGA
Upstream 100 bases:
>100_bases GGCCAGGCCGTGGCCAAAGCGGCCGGCCTGTCCAACGGCATCGCCCTGGACGCCGCCACCGCGACCGGCGACGTGATCCG CATCCTGCGGGGCATCTGAC
Downstream 100 bases:
>100_bases TGGCCGCCACCGTCGAGATCATCGACGCCCTGGTGGCGCGGCTGCAGGCCAGGTTGCCCGGTTTGCAGGTCGAGTATTTC CCGGAACGGCCGGCCGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MRYCTLADLQLAIPQATLTQLTNDVPADYSVAQEPNLAVVEEAVRQAEELVDAHLRGRYVLPLVTVPSVIKDNTVNLARH WLYARRPEGNELPDAVTRTYKAALQILESIRDGKLHIGVPTGEAAPEPGEVRVRARRQLFSASMLERYR
Sequences:
>Translated_149_residues MRYCTLADLQLAIPQATLTQLTNDVPADYSVAQEPNLAVVEEAVRQAEELVDAHLRGRYVLPLVTVPSVIKDNTVNLARH WLYARRPEGNELPDAVTRTYKAALQILESIRDGKLHIGVPTGEAAPEPGEVRVRARRQLFSASMLERYR >Mature_149_residues MRYCTLADLQLAIPQATLTQLTNDVPADYSVAQEPNLAVVEEAVRQAEELVDAHLRGRYVLPLVTVPSVIKDNTVNLARH WLYARRPEGNELPDAVTRTYKAALQILESIRDGKLHIGVPTGEAAPEPGEVRVRARRQLFSASMLERYR
Specific function: Unknown
COG id: COG4387
COG function: function code S; Mu-like prophage protein gp36
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16685; Mature: 16685
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYCTLADLQLAIPQATLTQLTNDVPADYSVAQEPNLAVVEEAVRQAEELVDAHLRGRYV CCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEE LPLVTVPSVIKDNTVNLARHWLYARRPEGNELPDAVTRTYKAALQILESIRDGKLHIGVP EHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECC TGEAAPEPGEVRVRARRQLFSASMLERYR CCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRYCTLADLQLAIPQATLTQLTNDVPADYSVAQEPNLAVVEEAVRQAEELVDAHLRGRYV CCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEE LPLVTVPSVIKDNTVNLARHWLYARRPEGNELPDAVTRTYKAALQILESIRDGKLHIGVP EHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECC TGEAAPEPGEVRVRARRQLFSASMLERYR CCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA