| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497580
Identifier: 34497580
GI number: 34497580
Start: 2312747
End: 2313355
Strand: Direct
Name: 34497580
Synonym: CV_2125
Alternate gene names: NA
Gene position: 2312747-2313355 (Clockwise)
Preceding gene: 34497579
Following gene: 34497581
Centisome position: 48.68
GC content: 56.81
Gene sequence:
>609_bases ATGAGCCTGGACGCACAAACAAGAAAGCTCGCTGCGATTGCCTACGGGGAAGCATCAGGAGCAAATGACGCAAACGAGAT AGGCGGCATCGCGTGGGCTGTCGCAAACCGCGCACGCGCCTGGGGAGGCAAGACGGTTGATGGTCTTCTTGCCGCCGATC CCAACTATACCTACGCCGTCAAAGACGGTAACCAGCGATACGCCAAGCTGATGAAGGCGACCGAGGCGGCAATAGCCGCT GATCCAGGCATGAAGCTGGCGGTGGAGAGCGCGAAGGCGGCCCTTGCCAACTCGGGCAACGATCCGTCAAATGGTGCTTA CTGGTGGGATGGCAAGGACTTCAAGAGCAACTTCGACAACCACCCGAAGGTGAAGGATGGTTTTCATATCACCGACCCCA AGCACAACATCTTCGATGTAAAGGACGTGGCCCACCCGACGACAATCTACTGGAAGGTGAGAGACAAGAAGACGGGCAAA GAGGTCAACTCCAAGGTTCGGGGCAAGTTCCAGTTTGTCTGGGAATCCACAGCGGCCTACGGCAGCACCATATTCTGGAA GCACGACGCGGACTACATCAAAGCCACTGGCGGAAAGGCATACCGATGA
Upstream 100 bases:
>100_bases GGGACGAAAAACTGCATGAGGGGGAGCTTTGCGGTGAAGGCAAAACCTCCGCATTCCCGATGAACAAGGCTGGCGAGCCA ACGTTTTGGATTCCGATGGT
Downstream 100 bases:
>100_bases GAAGACTGGCCTGGATTGCTCTCTGTCTGCCCTTTGGGGCGCAGGCCGGCAACCTTTTCGATGGCTACGAGGCCTACTAC ACCTCACTGCCAGGCCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSLDAQTRKLAAIAYGEASGANDANEIGGIAWAVANRARAWGGKTVDGLLAADPNYTYAVKDGNQRYAKLMKATEAAIAA DPGMKLAVESAKAALANSGNDPSNGAYWWDGKDFKSNFDNHPKVKDGFHITDPKHNIFDVKDVAHPTTIYWKVRDKKTGK EVNSKVRGKFQFVWESTAAYGSTIFWKHDADYIKATGGKAYR
Sequences:
>Translated_202_residues MSLDAQTRKLAAIAYGEASGANDANEIGGIAWAVANRARAWGGKTVDGLLAADPNYTYAVKDGNQRYAKLMKATEAAIAA DPGMKLAVESAKAALANSGNDPSNGAYWWDGKDFKSNFDNHPKVKDGFHITDPKHNIFDVKDVAHPTTIYWKVRDKKTGK EVNSKVRGKFQFVWESTAAYGSTIFWKHDADYIKATGGKAYR >Mature_201_residues SLDAQTRKLAAIAYGEASGANDANEIGGIAWAVANRARAWGGKTVDGLLAADPNYTYAVKDGNQRYAKLMKATEAAIAAD PGMKLAVESAKAALANSGNDPSNGAYWWDGKDFKSNFDNHPKVKDGFHITDPKHNIFDVKDVAHPTTIYWKVRDKKTGKE VNSKVRGKFQFVWESTAAYGSTIFWKHDADYIKATGGKAYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22050; Mature: 21919
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDAQTRKLAAIAYGEASGANDANEIGGIAWAVANRARAWGGKTVDGLLAADPNYTYAV CCCCCCHHEEEEEEECCCCCCCCHHHHCCCCEEHHHHHHHCCCCCCCCEEECCCCEEEEE KDGNQRYAKLMKATEAAIAADPGMKLAVESAKAALANSGNDPSNGAYWWDGKDFKSNFDN ECCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCCCCEEEECCCHHHCCCCC HPKVKDGFHITDPKHNIFDVKDVAHPTTIYWKVRDKKTGKEVNSKVRGKFQFVWESTAAY CCCCCCCEEEECCCCCEEEHHHCCCCEEEEEEEECCCCCHHHHHHHCCEEEEEEECCCCC GSTIFWKHDADYIKATGGKAYR CCEEEEECCCCEEEECCCCCCC >Mature Secondary Structure SLDAQTRKLAAIAYGEASGANDANEIGGIAWAVANRARAWGGKTVDGLLAADPNYTYAV CCCCCHHEEEEEEECCCCCCCCHHHHCCCCEEHHHHHHHCCCCCCCCEEECCCCEEEEE KDGNQRYAKLMKATEAAIAADPGMKLAVESAKAALANSGNDPSNGAYWWDGKDFKSNFDN ECCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCCCCEEEECCCHHHCCCCC HPKVKDGFHITDPKHNIFDVKDVAHPTTIYWKVRDKKTGKEVNSKVRGKFQFVWESTAAY CCCCCCCEEEECCCCCEEEHHHCCCCEEEEEEEECCCCCHHHHHHHCCEEEEEEECCCCC GSTIFWKHDADYIKATGGKAYR CCEEEEECCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA