| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497572
Identifier: 34497572
GI number: 34497572
Start: 2305782
End: 2306390
Strand: Reverse
Name: 34497572
Synonym: CV_2117
Alternate gene names: NA
Gene position: 2306390-2305782 (Counterclockwise)
Preceding gene: 34497573
Following gene: 34497571
Centisome position: 48.54
GC content: 64.2
Gene sequence:
>609_bases ATGAACGAGACCCTGGACGAATTTGGCGCCACCATCAAGTACGGCACCGTCAGCGCCAGCAAACCTGGCTTCGCCCGCGT GCGCCTGCCGGACATGGACAATATGCGCACCATGTGGCTGCCCATCGCCTACCCGAAAACCCAGGACGACCAAGCTTGTT GGTCCTACGACAACGGCGAGCAAGTGGCGGTGCTGCTGGATGCCCACGGCGAGGATGGCGTGATCCTGGGCGCGATCTAC TCCGAAGCCGACCCGCCGCCGACCACCAGCCGCGACAAGTTCATGGTGCGGTTCAAGGACGGCGCGCTGCTGGAATACGA CCGCGGCAGCCACACCCTGACCGTGTCCGGCGTACAGAAGGTGGTGATGCAGGCCAGCGCGGACATCCAGCTGCAGGCCG GGGGCAAAGTGACGGTGGACGCGCCGGATTCCGAGTTCTCCGGCAACGTCCTGGTGAAAGGCAAACTGGTGGGGCAAGGC GGGATGGCGATGTCTGGTGGGGCCGGTTCGGCGGCGGTGATCAGCGGGAATGTGCAGGTGGATGGCAATGTGAGCGCCAG CGGCTCCGTGATGGACGCTGGCGGGAACTCAAACCATCACTCTCACTAA
Upstream 100 bases:
>100_bases GCACCGGCAAGAAGGCTGCCGGCAAAGGGCTGAAGGTCTACGGCATGAAGAATGGCCAAGTCGACGTGGTCGGCACCACG CCGCAGAAAGGCAAGAAGAA
Downstream 100 bases:
>100_bases TCATCACTTTTGGTCGTGACAACATAATGGGATGGTTTCCAACCCGACTCAAAAGGAGTCAAAAATGAATGTTGCTCACT ACCGAGGGTACGAAATTGAA
Product: bacteriophage baseplate protein
Products: NA
Alternate protein names: Phage Baseplate Assembly Protein V; Bacteriophage Baseplate Protein; Phage-Related Baseplate Assembly Protein; Phage Baseplate Assembly Protein GpV; Bacteriophage Baseplate Assembly; Phage Tail Spike Protein; Prophage; Phage Baseplate Protein
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MNETLDEFGATIKYGTVSASKPGFARVRLPDMDNMRTMWLPIAYPKTQDDQACWSYDNGEQVAVLLDAHGEDGVILGAIY SEADPPPTTSRDKFMVRFKDGALLEYDRGSHTLTVSGVQKVVMQASADIQLQAGGKVTVDAPDSEFSGNVLVKGKLVGQG GMAMSGGAGSAAVISGNVQVDGNVSASGSVMDAGGNSNHHSH
Sequences:
>Translated_202_residues MNETLDEFGATIKYGTVSASKPGFARVRLPDMDNMRTMWLPIAYPKTQDDQACWSYDNGEQVAVLLDAHGEDGVILGAIY SEADPPPTTSRDKFMVRFKDGALLEYDRGSHTLTVSGVQKVVMQASADIQLQAGGKVTVDAPDSEFSGNVLVKGKLVGQG GMAMSGGAGSAAVISGNVQVDGNVSASGSVMDAGGNSNHHSH >Mature_202_residues MNETLDEFGATIKYGTVSASKPGFARVRLPDMDNMRTMWLPIAYPKTQDDQACWSYDNGEQVAVLLDAHGEDGVILGAIY SEADPPPTTSRDKFMVRFKDGALLEYDRGSHTLTVSGVQKVVMQASADIQLQAGGKVTVDAPDSEFSGNVLVKGKLVGQG GMAMSGGAGSAAVISGNVQVDGNVSASGSVMDAGGNSNHHSH
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21152; Mature: 21152
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNETLDEFGATIKYGTVSASKPGFARVRLPDMDNMRTMWLPIAYPKTQDDQACWSYDNGE CCCCHHHHCCEEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCEEECCCCC QVAVLLDAHGEDGVILGAIYSEADPPPTTSRDKFMVRFKDGALLEYDRGSHTLTVSGVQK EEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEHHHHHH VVMQASADIQLQAGGKVTVDAPDSEFSGNVLVKGKLVGQGGMAMSGGAGSAAVISGNVQV HHHHCCCCEEEECCCEEEEECCCCCCCCCEEEEEEEECCCCEEEECCCCCEEEEECCEEE DGNVSASGSVMDAGGNSNHHSH CCCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure MNETLDEFGATIKYGTVSASKPGFARVRLPDMDNMRTMWLPIAYPKTQDDQACWSYDNGE CCCCHHHHCCEEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCEEECCCCC QVAVLLDAHGEDGVILGAIYSEADPPPTTSRDKFMVRFKDGALLEYDRGSHTLTVSGVQK EEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEHHHHHH VVMQASADIQLQAGGKVTVDAPDSEFSGNVLVKGKLVGQGGMAMSGGAGSAAVISGNVQV HHHHCCCCEEEECCCEEEEECCCCCCCCCEEEEEEEECCCCEEEECCCCCEEEEECCEEE DGNVSASGSVMDAGGNSNHHSH CCCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA