Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is ybjT [C]

Identifier: 34497563

GI number: 34497563

Start: 2299131

End: 2299964

Strand: Direct

Name: ybjT [C]

Synonym: CV_2108

Alternate gene names: 34497563

Gene position: 2299131-2299964 (Clockwise)

Preceding gene: 34497562

Following gene: 34497564

Centisome position: 48.39

GC content: 68.11

Gene sequence:

>834_bases
ATGAAGATATTGCTACTGGGCGGCAACGGGTTTATCGGCCGGAGGCTGGCCGCCAGGCTGATCGAGGCGGGACATGAGCT
GTCGGCCCCGTCCCGCGTCGAATTGGATCTGGCGCGTCCGAATCAGGACTGGGCGGCTTGGGTGGATGGAGTGGATGCCG
TCGCCAATCTGGCCGGCGCGTTCCGGCAGGGGCGAGCCGGCGGGTTCGAAGCCATTCACCATGCCGGCCCATTGCGCCTG
GCTGCATTGGCGAGGGCGCATGGCGTCCGGCGTTGGGTGCAGTTGTCGGCCTTGGGCGCCGCAGCGCATGCCGGCGCGCC
GTTCCTGTCCAGCAAGGGCAGAGGCGATGCCGCTCTGCTGGATTGTGGCATGGAGGCTGTCGTCGCCCGGCCCTCGTTGA
TATACGGCGCGGACGGCGCCAGCAGCCGCTTGTTGTTGCGTCTGGCTCGCCTGCCATTCTGGCTGTTGCCGGAAGGCGGC
GGACAACGCATCCAGCCGGTAGCGGCGGCCGACGTGGCCGAGGGGCTGCAGCGCTTGATCGAAGGCGATGCGCGCGGCGT
GATCGACTTCGTCGGAGCGGCGGAAGCGTCTCTGGCCGATTATCTGCGGCAATTGAGGCGTTTGCAGGGCGTGGGTGGCG
CAGCCTGGTTATGCCCTGTGCCGGCTTGGCTGGCGGCCGGATTGGCCGCCGCTTGCGGATGCTGGCCCGGCAGTCTGTTG
AATCGAGACAGCTTGCGCATGCTGCGCCAGGGCTCGACAGCGGACCCGGCCGCTTTCGCCGCGCTGCTTGGCCGCCAGCC
GCTGTCGTTCAGGCAATTCGGGGAGGTCGCATGA

Upstream 100 bases:

>100_bases
CGCAGCTGTTGGTGCTGGTGCGGCTGGTGTGGCGCCAGGTGGCTTTCAGCCGGCCCAAGGCGGCGGGAACCGCCATCGCC
GATCATGCCGGAGCGCCGCA

Downstream 100 bases:

>100_bases
AAGTTTCGCGGCGAATGGTGGAGCTGTCCCTGGCCGCGCTGTGGCTGTGGAGCGGCTTGCAGCCGCCGTTGACGGTTTGG
AGCGAATCGATCGCCATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; NADH-Ubiquinone Oxidoreductase

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKILLLGGNGFIGRRLAARLIEAGHELSAPSRVELDLARPNQDWAAWVDGVDAVANLAGAFRQGRAGGFEAIHHAGPLRL
AALARAHGVRRWVQLSALGAAAHAGAPFLSSKGRGDAALLDCGMEAVVARPSLIYGADGASSRLLLRLARLPFWLLPEGG
GQRIQPVAAADVAEGLQRLIEGDARGVIDFVGAAEASLADYLRQLRRLQGVGGAAWLCPVPAWLAAGLAAACGCWPGSLL
NRDSLRMLRQGSTADPAAFAALLGRQPLSFRQFGEVA

Sequences:

>Translated_277_residues
MKILLLGGNGFIGRRLAARLIEAGHELSAPSRVELDLARPNQDWAAWVDGVDAVANLAGAFRQGRAGGFEAIHHAGPLRL
AALARAHGVRRWVQLSALGAAAHAGAPFLSSKGRGDAALLDCGMEAVVARPSLIYGADGASSRLLLRLARLPFWLLPEGG
GQRIQPVAAADVAEGLQRLIEGDARGVIDFVGAAEASLADYLRQLRRLQGVGGAAWLCPVPAWLAAGLAAACGCWPGSLL
NRDSLRMLRQGSTADPAAFAALLGRQPLSFRQFGEVA
>Mature_277_residues
MKILLLGGNGFIGRRLAARLIEAGHELSAPSRVELDLARPNQDWAAWVDGVDAVANLAGAFRQGRAGGFEAIHHAGPLRL
AALARAHGVRRWVQLSALGAAAHAGAPFLSSKGRGDAALLDCGMEAVVARPSLIYGADGASSRLLLRLARLPFWLLPEGG
GQRIQPVAAADVAEGLQRLIEGDARGVIDFVGAAEASLADYLRQLRRLQGVGGAAWLCPVPAWLAAGLAAACGCWPGSLL
NRDSLRMLRQGSTADPAAFAALLGRQPLSFRQFGEVA

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28954; Mature: 28954

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLLGGNGFIGRRLAARLIEAGHELSAPSRVELDLARPNQDWAAWVDGVDAVANLAGA
CEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
FRQGRAGGFEAIHHAGPLRLAALARAHGVRRWVQLSALGAAAHAGAPFLSSKGRGDAALL
HHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
DCGMEAVVARPSLIYGADGASSRLLLRLARLPFWLLPEGGGQRIQPVAAADVAEGLQRLI
HHCHHHHHHCCCEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
EGDARGVIDFVGAAEASLADYLRQLRRLQGVGGAAWLCPVPAWLAAGLAAACGCWPGSLL
CCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHC
NRDSLRMLRQGSTADPAAFAALLGRQPLSFRQFGEVA
CHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHCCCC
>Mature Secondary Structure
MKILLLGGNGFIGRRLAARLIEAGHELSAPSRVELDLARPNQDWAAWVDGVDAVANLAGA
CEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
FRQGRAGGFEAIHHAGPLRLAALARAHGVRRWVQLSALGAAAHAGAPFLSSKGRGDAALL
HHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
DCGMEAVVARPSLIYGADGASSRLLLRLARLPFWLLPEGGGQRIQPVAAADVAEGLQRLI
HHCHHHHHHCCCEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
EGDARGVIDFVGAAEASLADYLRQLRRLQGVGGAAWLCPVPAWLAAGLAAACGCWPGSLL
CCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHC
NRDSLRMLRQGSTADPAAFAALLGRQPLSFRQFGEVA
CHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA