| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is zntR [C]
Identifier: 34497542
GI number: 34497542
Start: 2273494
End: 2273901
Strand: Direct
Name: zntR [C]
Synonym: CV_2087
Alternate gene names: 34497542
Gene position: 2273494-2273901 (Clockwise)
Preceding gene: 34497534
Following gene: 34497543
Centisome position: 47.85
GC content: 63.73
Gene sequence:
>408_bases ATGGGCGAACAGGTTTTCAACATCACCGAACTCGCGCAGGAGTTCGACATCACCACCCGCGCCATCCGCTTTTACGAGGA CCAGGGCCTGCTGGAGCCGGAGCGGGCGGGGCAGCGGCGCATCTACAACCGGCGCGACCGCGTGCGGCTGATGCTGATCC TGCGCGGCAAGCGTATCGGCTTGTCCTTGCAGGAGATACGCGAGCTGTTCGCGCTGTACGACGCGGCGCACGACGACGCG CCGCAGCTGCAGGAATTCATCCGCATCCTGGCGCGCAAGGAGCAGCAGCTTTTGGCGCAGATGGAAGACATCAAGGTGGT GCTGACCGAAATCGGCCAGTTGCGCGGCCAGTGCGAGAAATCGCTGGGCAAGCGCGCCAACGGCCACAACCAAGCAAAGG AGCTGTGA
Upstream 100 bases:
>100_bases ACGATAACTTGACGTTTACGTCAACGTCAACAGACAATGAATGCAAAAGCACCCGACTGTGGCGCGCGTGGCCGCAGCGG GAAGATAAAGGGACAGACGC
Downstream 100 bases:
>100_bases TGCAACAACAGGAAATCGTGATCGTGGGCATGGCGCGCACCGCCATGGGCGGCTTCCAGGGCGCGCTGTCCGGTCTGACC GCCAGCCAGCTGGGCGCGGC
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Mercuric Resistance Operon Regulatory Protein MerR; Mercuric Resistance Operon Regulatory Protein; Regulatory Protein MerR; HTH-Type Transcriptional Regulator; Regulatory Gene Of GnyRDBHAL Cluster GnyR; Transcriptional Regulatory Protein MerR Family; Regulatory Protein; MerR Family Regulatory Family; Transcription Regulator Protein; Transcriptional Regulator Protein
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MGEQVFNITELAQEFDITTRAIRFYEDQGLLEPERAGQRRIYNRRDRVRLMLILRGKRIGLSLQEIRELFALYDAAHDDA PQLQEFIRILARKEQQLLAQMEDIKVVLTEIGQLRGQCEKSLGKRANGHNQAKEL
Sequences:
>Translated_135_residues MGEQVFNITELAQEFDITTRAIRFYEDQGLLEPERAGQRRIYNRRDRVRLMLILRGKRIGLSLQEIRELFALYDAAHDDA PQLQEFIRILARKEQQLLAQMEDIKVVLTEIGQLRGQCEKSLGKRANGHNQAKEL >Mature_134_residues GEQVFNITELAQEFDITTRAIRFYEDQGLLEPERAGQRRIYNRRDRVRLMLILRGKRIGLSLQEIRELFALYDAAHDDAP QLQEFIRILARKEQQLLAQMEDIKVVLTEIGQLRGQCEKSLGKRANGHNQAKEL
Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15764; Mature: 15633
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEQVFNITELAQEFDITTRAIRFYEDQGLLEPERAGQRRIYNRRDRVRLMLILRGKRIG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC LSLQEIRELFALYDAAHDDAPQLQEFIRILARKEQQLLAQMEDIKVVLTEIGQLRGQCEK CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLGKRANGHNQAKEL HHHCCCCCCCHHCCC >Mature Secondary Structure GEQVFNITELAQEFDITTRAIRFYEDQGLLEPERAGQRRIYNRRDRVRLMLILRGKRIG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC LSLQEIRELFALYDAAHDDAPQLQEFIRILARKEQQLLAQMEDIKVVLTEIGQLRGQCEK CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLGKRANGHNQAKEL HHHCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA