| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is cinA [C]
Identifier: 34497530
GI number: 34497530
Start: 2259765
End: 2260523
Strand: Direct
Name: cinA [C]
Synonym: CV_2075
Alternate gene names: 34497530
Gene position: 2259765-2260523 (Clockwise)
Preceding gene: 34497529
Following gene: 34497531
Centisome position: 47.56
GC content: 64.69
Gene sequence:
>759_bases ATGCAAGTGGGCGCGCTGATCATCGGCGACGAACTGTTGTCCGGCAAACGCCAGGACAAGCATATGCAGGCCTTGATCCG CATCCTGGCCGCGCGCGGGATGAAGCTGGCCTGGGCCGAATATCTGGGCGACGATCCGGCCCGCATCGAAGCCGCCTTGC GCCGCGCCTTCGCCGGCGGCGATCTGGTATTCAGCTTCGGCGGCATCGGCGCCACGCCGGACGACCATACCCGCGCTTGC GCCGCCCGCGCGCTGGGCGTGCCGCTGGCGCTGCATCCGGAGGCCAAGGCGCTGATCGAGGGACGTTTCGGCGCGGACGC CTATCCGCACCGGATTCATATGGGGAATTTCCCGCAGGGCGCCGCCATCATCCCCAATCCGGTCAACCAGATCGCCGGCT TTTCGCACGGCCATGTCCATTTCCTGCCCGGCTTCCCCAGCATGGCCTGGCCTATGGCCGAATGGGTGCTGGATACGCAT TGCCGCCATCTGTTCGCGACTCAACCCGACGTCGAGCGGTCCTGCATCGCGATTCAGGCCCGCGAGGGCGATCTGATCGG CCTGATGCAGGATTTTTCCGCCCGCTATCCGGCGCTCAAATTGTCCAGCCTGCCCAATTTCGGCAATCAGGCGATTCCGG ACATGCATATCGAGTTCGGCTTCACAGGCCAGCCGGCCTTGGTGGAGATCGCTATCGCTGAATGGGCGAAGTCGCTGCGG GGGCTGGGATATGAAGTGAGGACGGGTGATCCGGAGTAG
Upstream 100 bases:
>100_bases ATCGGTTTCGCCGCGATGCGCTATGTGGGCAACAGCCATATCGACGATTGTTACGCCGTCTGCCGGCGCATGCTGGAGCA GGGCGGAAGGGAGTAGAACC
Downstream 100 bases:
>100_bases AGGCCGCGCGGCGGCATGAAAATCCATTTTGAACGTTGATGTCCTTGTGCCGGCTTGCATGGGCCGGGAAGAATCGGCGC CCAATGCATGTTTCGGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MQVGALIIGDELLSGKRQDKHMQALIRILAARGMKLAWAEYLGDDPARIEAALRRAFAGGDLVFSFGGIGATPDDHTRAC AARALGVPLALHPEAKALIEGRFGADAYPHRIHMGNFPQGAAIIPNPVNQIAGFSHGHVHFLPGFPSMAWPMAEWVLDTH CRHLFATQPDVERSCIAIQAREGDLIGLMQDFSARYPALKLSSLPNFGNQAIPDMHIEFGFTGQPALVEIAIAEWAKSLR GLGYEVRTGDPE
Sequences:
>Translated_252_residues MQVGALIIGDELLSGKRQDKHMQALIRILAARGMKLAWAEYLGDDPARIEAALRRAFAGGDLVFSFGGIGATPDDHTRAC AARALGVPLALHPEAKALIEGRFGADAYPHRIHMGNFPQGAAIIPNPVNQIAGFSHGHVHFLPGFPSMAWPMAEWVLDTH CRHLFATQPDVERSCIAIQAREGDLIGLMQDFSARYPALKLSSLPNFGNQAIPDMHIEFGFTGQPALVEIAIAEWAKSLR GLGYEVRTGDPE >Mature_252_residues MQVGALIIGDELLSGKRQDKHMQALIRILAARGMKLAWAEYLGDDPARIEAALRRAFAGGDLVFSFGGIGATPDDHTRAC AARALGVPLALHPEAKALIEGRFGADAYPHRIHMGNFPQGAAIIPNPVNQIAGFSHGHVHFLPGFPSMAWPMAEWVLDTH CRHLFATQPDVERSCIAIQAREGDLIGLMQDFSARYPALKLSSLPNFGNQAIPDMHIEFGFTGQPALVEIAIAEWAKSLR GLGYEVRTGDPE
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323832, Length=223, Percent_Identity=28.6995515695067, Blast_Score=86, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR001453 [H]
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 27335; Mature: 27335
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVGALIIGDELLSGKRQDKHMQALIRILAARGMKLAWAEYLGDDPARIEAALRRAFAGG CCCCEEEECHHHHCCCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCHHHHHHHHHHHHCCC DLVFSFGGIGATPDDHTRACAARALGVPLALHPEAKALIEGRFGADAYPHRIHMGNFPQG CEEEEECCCCCCCCHHHHHHHHHHHCCCEEECCCHHHHHCCCCCCCCCCCEEECCCCCCC AAIIPNPVNQIAGFSHGHVHFLPGFPSMAWPMAEWVLDTHCRHLFATQPDVERSCIAIQA CCCCCCCHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE REGDLIGLMQDFSARYPALKLSSLPNFGNQAIPDMHIEFGFTGQPALVEIAIAEWAKSLR CCCCEEHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCHHEEHHHHHHHHHHH GLGYEVRTGDPE HCCEEECCCCCC >Mature Secondary Structure MQVGALIIGDELLSGKRQDKHMQALIRILAARGMKLAWAEYLGDDPARIEAALRRAFAGG CCCCEEEECHHHHCCCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCHHHHHHHHHHHHCCC DLVFSFGGIGATPDDHTRACAARALGVPLALHPEAKALIEGRFGADAYPHRIHMGNFPQG CEEEEECCCCCCCCHHHHHHHHHHHCCCEEECCCHHHHHCCCCCCCCCCCEEECCCCCCC AAIIPNPVNQIAGFSHGHVHFLPGFPSMAWPMAEWVLDTHCRHLFATQPDVERSCIAIQA CCCCCCCHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE REGDLIGLMQDFSARYPALKLSSLPNFGNQAIPDMHIEFGFTGQPALVEIAIAEWAKSLR CCCCEEHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCHHEEHHHHHHHHHHH GLGYEVRTGDPE HCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA