| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yajQ [C]
Identifier: 34497502
GI number: 34497502
Start: 2234884
End: 2235384
Strand: Direct
Name: yajQ [C]
Synonym: CV_2047
Alternate gene names: 34497502
Gene position: 2234884-2235384 (Clockwise)
Preceding gene: 34497500
Following gene: 34497506
Centisome position: 47.04
GC content: 58.28
Gene sequence:
>501_bases ATGCCGTCTTTTGATGTCGTTTCCGAAGTAAACAAGGTGGAAGTGCGCAACGCGCTGGACCAGGCCAACAAGGAAGTGTC CACCCGTTACGATTTCAAGGGCAGTGACGCCCGCATCGAATTCAACGACAAGGAAGTGACGCTGTTCGCCGATACCGAGT TCCAGCTGGACCAGGTCAACGACATTCTGGTGAACAAGCTGTCCAAGCGCAGCGTCGACGTGCGCAGCCTGGACTACGGC AAGCTGGAGAAGGTGTCCGGCAACAAGGTGAAAAAGGTGCTGAAGATCAAGGAAGGCCTGGACAGCGATCTGGCGAAGAA GATCGTCAAGCTGCTGAAGGACTCCAAGATGAAGGTGCAGGCCAGCATCCAAGGCGAGGCGGTGCGGGTGTCCGGCGCCA AGCGCGACGTGCTGCAGGAAGCCATCGCGCTGCTGAAGGCCGAGATCGCGTCCGATCTGGAAAACGGCGCGCCGCTGCAG TTCAACAACTTCCGCGACTGA
Upstream 100 bases:
>100_bases TCGATAAAACCATTTCCGGCCTGTCTTGGCAATGGCATGACGGGTGACAAGCGGCAACGCCGCTACTAGAATGCGGCAGG TTATTAGCGAGGATCGTTTT
Downstream 100 bases:
>100_bases CTCCCGCCGCGCGGCGCGCCAGTCACGAAAAAGGAGACCCAAGGGTCTCCTTTTTTATTGCCGGCGGCCGCTCAGCGCTG GGCGGCGCGCCAGGCCTCCA
Product: nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MPSFDVVSEVNKVEVRNALDQANKEVSTRYDFKGSDARIEFNDKEVTLFADTEFQLDQVNDILVNKLSKRSVDVRSLDYG KLEKVSGNKVKKVLKIKEGLDSDLAKKIVKLLKDSKMKVQASIQGEAVRVSGAKRDVLQEAIALLKAEIASDLENGAPLQ FNNFRD
Sequences:
>Translated_166_residues MPSFDVVSEVNKVEVRNALDQANKEVSTRYDFKGSDARIEFNDKEVTLFADTEFQLDQVNDILVNKLSKRSVDVRSLDYG KLEKVSGNKVKKVLKIKEGLDSDLAKKIVKLLKDSKMKVQASIQGEAVRVSGAKRDVLQEAIALLKAEIASDLENGAPLQ FNNFRD >Mature_165_residues PSFDVVSEVNKVEVRNALDQANKEVSTRYDFKGSDARIEFNDKEVTLFADTEFQLDQVNDILVNKLSKRSVDVRSLDYGK LEKVSGNKVKKVLKIKEGLDSDLAKKIVKLLKDSKMKVQASIQGEAVRVSGAKRDVLQEAIALLKAEIASDLENGAPLQF NNFRD
Specific function: Unknown
COG id: COG1666
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0234 family
Homologues:
Organism=Escherichia coli, GI87081737, Length=168, Percent_Identity=46.4285714285714, Blast_Score=138, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2047_CHRVO (Q7NWE3)
Other databases:
- EMBL: AE016825 - RefSeq: NP_901717.1 - ProteinModelPortal: Q7NWE3 - SMR: Q7NWE3 - GeneID: 2548819 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_2047 - NMPDR: fig|243365.1.peg.2047 - HOGENOM: HBG290634 - OMA: LQFTNYR - PhylomeDB: Q7NWE3 - ProtClustDB: PRK05412 - BioCyc: CVIO243365:CV_2047-MONOMER - HAMAP: MF_00632 - InterPro: IPR007551
Pfam domain/function: PF04461 DUF520
EC number: NA
Molecular weight: Translated: 18559; Mature: 18428
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFDVVSEVNKVEVRNALDQANKEVSTRYDFKGSDARIEFNDKEVTLFADTEFQLDQVN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCHHHHH DILVNKLSKRSVDVRSLDYGKLEKVSGNKVKKVLKIKEGLDSDLAKKIVKLLKDSKMKVQ HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEE ASIQGEAVRVSGAKRDVLQEAIALLKAEIASDLENGAPLQFNNFRD EECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PSFDVVSEVNKVEVRNALDQANKEVSTRYDFKGSDARIEFNDKEVTLFADTEFQLDQVN CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCHHHHH DILVNKLSKRSVDVRSLDYGKLEKVSGNKVKKVLKIKEGLDSDLAKKIVKLLKDSKMKVQ HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEE ASIQGEAVRVSGAKRDVLQEAIALLKAEIASDLENGAPLQFNNFRD EECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782