Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is yajQ [C]

Identifier: 34497502

GI number: 34497502

Start: 2234884

End: 2235384

Strand: Direct

Name: yajQ [C]

Synonym: CV_2047

Alternate gene names: 34497502

Gene position: 2234884-2235384 (Clockwise)

Preceding gene: 34497500

Following gene: 34497506

Centisome position: 47.04

GC content: 58.28

Gene sequence:

>501_bases
ATGCCGTCTTTTGATGTCGTTTCCGAAGTAAACAAGGTGGAAGTGCGCAACGCGCTGGACCAGGCCAACAAGGAAGTGTC
CACCCGTTACGATTTCAAGGGCAGTGACGCCCGCATCGAATTCAACGACAAGGAAGTGACGCTGTTCGCCGATACCGAGT
TCCAGCTGGACCAGGTCAACGACATTCTGGTGAACAAGCTGTCCAAGCGCAGCGTCGACGTGCGCAGCCTGGACTACGGC
AAGCTGGAGAAGGTGTCCGGCAACAAGGTGAAAAAGGTGCTGAAGATCAAGGAAGGCCTGGACAGCGATCTGGCGAAGAA
GATCGTCAAGCTGCTGAAGGACTCCAAGATGAAGGTGCAGGCCAGCATCCAAGGCGAGGCGGTGCGGGTGTCCGGCGCCA
AGCGCGACGTGCTGCAGGAAGCCATCGCGCTGCTGAAGGCCGAGATCGCGTCCGATCTGGAAAACGGCGCGCCGCTGCAG
TTCAACAACTTCCGCGACTGA

Upstream 100 bases:

>100_bases
TCGATAAAACCATTTCCGGCCTGTCTTGGCAATGGCATGACGGGTGACAAGCGGCAACGCCGCTACTAGAATGCGGCAGG
TTATTAGCGAGGATCGTTTT

Downstream 100 bases:

>100_bases
CTCCCGCCGCGCGGCGCGCCAGTCACGAAAAAGGAGACCCAAGGGTCTCCTTTTTTATTGCCGGCGGCCGCTCAGCGCTG
GGCGGCGCGCCAGGCCTCCA

Product: nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MPSFDVVSEVNKVEVRNALDQANKEVSTRYDFKGSDARIEFNDKEVTLFADTEFQLDQVNDILVNKLSKRSVDVRSLDYG
KLEKVSGNKVKKVLKIKEGLDSDLAKKIVKLLKDSKMKVQASIQGEAVRVSGAKRDVLQEAIALLKAEIASDLENGAPLQ
FNNFRD

Sequences:

>Translated_166_residues
MPSFDVVSEVNKVEVRNALDQANKEVSTRYDFKGSDARIEFNDKEVTLFADTEFQLDQVNDILVNKLSKRSVDVRSLDYG
KLEKVSGNKVKKVLKIKEGLDSDLAKKIVKLLKDSKMKVQASIQGEAVRVSGAKRDVLQEAIALLKAEIASDLENGAPLQ
FNNFRD
>Mature_165_residues
PSFDVVSEVNKVEVRNALDQANKEVSTRYDFKGSDARIEFNDKEVTLFADTEFQLDQVNDILVNKLSKRSVDVRSLDYGK
LEKVSGNKVKKVLKIKEGLDSDLAKKIVKLLKDSKMKVQASIQGEAVRVSGAKRDVLQEAIALLKAEIASDLENGAPLQF
NNFRD

Specific function: Unknown

COG id: COG1666

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0234 family

Homologues:

Organism=Escherichia coli, GI87081737, Length=168, Percent_Identity=46.4285714285714, Blast_Score=138, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2047_CHRVO (Q7NWE3)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_901717.1
- ProteinModelPortal:   Q7NWE3
- SMR:   Q7NWE3
- GeneID:   2548819
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_2047
- NMPDR:   fig|243365.1.peg.2047
- HOGENOM:   HBG290634
- OMA:   LQFTNYR
- PhylomeDB:   Q7NWE3
- ProtClustDB:   PRK05412
- BioCyc:   CVIO243365:CV_2047-MONOMER
- HAMAP:   MF_00632
- InterPro:   IPR007551

Pfam domain/function: PF04461 DUF520

EC number: NA

Molecular weight: Translated: 18559; Mature: 18428

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFDVVSEVNKVEVRNALDQANKEVSTRYDFKGSDARIEFNDKEVTLFADTEFQLDQVN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCHHHHH
DILVNKLSKRSVDVRSLDYGKLEKVSGNKVKKVLKIKEGLDSDLAKKIVKLLKDSKMKVQ
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEE
ASIQGEAVRVSGAKRDVLQEAIALLKAEIASDLENGAPLQFNNFRD
EECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PSFDVVSEVNKVEVRNALDQANKEVSTRYDFKGSDARIEFNDKEVTLFADTEFQLDQVN
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCHHHHH
DILVNKLSKRSVDVRSLDYGKLEKVSGNKVKKVLKIKEGLDSDLAKKIVKLLKDSKMKVQ
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEE
ASIQGEAVRVSGAKRDVLQEAIALLKAEIASDLENGAPLQFNNFRD
EECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782