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The map label for this gene is yrhP [H]

Identifier: 34497501

GI number: 34497501

Start: 2234118

End: 2234753

Strand: Reverse

Name: yrhP [H]

Synonym: CV_2046

Alternate gene names: 34497501

Gene position: 2234753-2234118 (Counterclockwise)

Preceding gene: 34497503

Following gene: 34497499

Centisome position: 47.04

GC content: 69.65

Gene sequence:

>636_bases
ATGCTCGTCACCCTGCCGCAACTGGCCGCCTTTCTCGCTGCCGCCATGCTGATCACCGTCACCCCCGGGCCCGACAACCT
GATGGTGCTGAGCCAGGGCATCTCCCGCGGCCGCCGCCAGGGCATGGCCTTCGGCCTGGGCTGCGCGCTGGGTTGCCTGA
ACCACACGCTGCTGGCCGCGCTGGGCGTCAGCGCGCTGATCGCCGCCTCGCCGCTCGCCTTCGCCGCGCTCAAGATCGCC
GGCGGCGCTTACCTGGTTTACCTGGGCTGGGGCGCCATACGCAGCTCCGGCGCCAGCTTCGACGCGGACGCCCAGGTCGG
CGGCCCCCAGGGATCGCTGGCCGCCACCTTCCGCCGCGGCCTGATCGCCAACGCGATCAATCCCAAGGTGGTGCTGTTCT
TCCTTGCCTTCCTGCCGCAGTTCGTCAATCCGGCGCAAGGCCCTGTCGGCCTGCAGACCGCCATCCTGGGCGCGCTGTTC
ACGCTGCAGGGCGCGCTGATCTTCGGCGCGCTTGGCTATTTTTCCGGCCACGTCTGCCAGTGGCTGGCGAAAAGCCGCAA
AGCCAGCCAGCGGCTTGATCGCGTGGCCGGCACCGTTTTCATCGCGCTGGGCCTGCGCCTGATTCTGGCGCGCTGA

Upstream 100 bases:

>100_bases
TCTAGTAGCGGCGTTGCCGCTTGTCACCCGTCATGCCATTGCCAAGACAGGCCGGAAATGGTTTTATCGACGACAATCAA
ACAAATCCCGGAAATCCGCC

Downstream 100 bases:

>100_bases
GCGCGCGAAAAAGGCGGCCCGGGGCCGCCTTCCGCCATCCATCCCGATCGGGTCAGATCGCCTGCTCGTTGGTTTCGCCG
GTGCGGATGCGCACCACCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLVTLPQLAAFLAAAMLITVTPGPDNLMVLSQGISRGRRQGMAFGLGCALGCLNHTLLAALGVSALIAASPLAFAALKIA
GGAYLVYLGWGAIRSSGASFDADAQVGGPQGSLAATFRRGLIANAINPKVVLFFLAFLPQFVNPAQGPVGLQTAILGALF
TLQGALIFGALGYFSGHVCQWLAKSRKASQRLDRVAGTVFIALGLRLILAR

Sequences:

>Translated_211_residues
MLVTLPQLAAFLAAAMLITVTPGPDNLMVLSQGISRGRRQGMAFGLGCALGCLNHTLLAALGVSALIAASPLAFAALKIA
GGAYLVYLGWGAIRSSGASFDADAQVGGPQGSLAATFRRGLIANAINPKVVLFFLAFLPQFVNPAQGPVGLQTAILGALF
TLQGALIFGALGYFSGHVCQWLAKSRKASQRLDRVAGTVFIALGLRLILAR
>Mature_211_residues
MLVTLPQLAAFLAAAMLITVTPGPDNLMVLSQGISRGRRQGMAFGLGCALGCLNHTLLAALGVSALIAASPLAFAALKIA
GGAYLVYLGWGAIRSSGASFDADAQVGGPQGSLAATFRRGLIANAINPKVVLFFLAFLPQFVNPAQGPVGLQTAILGALF
TLQGALIFGALGYFSGHVCQWLAKSRKASQRLDRVAGTVFIALGLRLILAR

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=198, Percent_Identity=28.7878787878788, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI48994979, Length=209, Percent_Identity=28.2296650717703, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786522, Length=149, Percent_Identity=31.5436241610738, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI48994978, Length=216, Percent_Identity=30.5555555555556, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21750; Mature: 21750

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVTLPQLAAFLAAAMLITVTPGPDNLMVLSQGISRGRRQGMAFGLGCALGCLNHTLLAA
CEEEHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LGVSALIAASPLAFAALKIAGGAYLVYLGWGAIRSSGASFDADAQVGGPQGSLAATFRRG
HHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
LIANAINPKVVLFFLAFLPQFVNPAQGPVGLQTAILGALFTLQGALIFGALGYFSGHVCQ
HHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLAKSRKASQRLDRVAGTVFIALGLRLILAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLVTLPQLAAFLAAAMLITVTPGPDNLMVLSQGISRGRRQGMAFGLGCALGCLNHTLLAA
CEEEHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LGVSALIAASPLAFAALKIAGGAYLVYLGWGAIRSSGASFDADAQVGGPQGSLAATFRRG
HHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
LIANAINPKVVLFFLAFLPQFVNPAQGPVGLQTAILGALFTLQGALIFGALGYFSGHVCQ
HHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLAKSRKASQRLDRVAGTVFIALGLRLILAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]