| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497450
Identifier: 34497450
GI number: 34497450
Start: 2175893
End: 2176792
Strand: Direct
Name: 34497450
Synonym: CV_1995
Alternate gene names: NA
Gene position: 2175893-2176792 (Clockwise)
Preceding gene: 34497449
Following gene: 34497451
Centisome position: 45.8
GC content: 68.67
Gene sequence:
>900_bases ATGCGGGCGAGCAGCTGGATTCCATGGGTATTCGTCGTGTTGTGGAGCACGGGCTTCACCGGCGCCAAGCTCGGTTTGCC GTATTGCGGGCCGTTCACCTTCCTGGCCATCCGGATGGCGCTGACCTTGCTGTGCTTCGCCGCGCTGCTGGCCGCGTTGC GTCCTGCCTGGCCGACATTCTCTCAAGCGCGGCGGCAGTGGGTGAGCGGCGGCATGCTGCACGGCGGCTACCTGGGCTGC CTGTTCGCGGCGATCAAGCTGGGCGTGCCCGCAGGCCTGGCGGCGCTGATCATGGGCATGCAGCCCTTGTTGACCGCCTT GATTTCCTGGCGCTTGGGCGAGAAGCGCTTTCGCGCCCTCCAGTGGCTGGGCATGGCGTTGGGCCTCGCCGGCACCGCGC TGGTGATCGCGGGCAGCAAGGGCGTGGCGCTGGCTGGCGGCGCCGGCGCGGCCTTCGTGATCGCCGGCTTGCTGCTGATC ACCGGCGGCACGCTTTACCAGCGCTACCGCGGCGGCGGCGCGCATCCGGTCGCCGGCGCGTTCCATCAGTATCTGTCGGC GCTGGCGGTGACCGGAACGCTGGCGCTGTTGTTCGAGCGCGGGGAGCGGGTGGTGTGGAGCGGGGACTTCATCTTCGCGC TGGCCTGGAGCGTGGCGATGCTGTCGGTGCTGGCGGTATTGCTGCTGTTGCGCATGCTGCGCGACGGCGATGTCAGCCGG GTGGCGGCCTATCTCTACCTGGTGCCGGGCTTGACGGCGATCCAGGCCTGGTGGTTGTTCGACGAGTGCTTGAGCCCGGT GGCGATGGGGGGTATCGTACTGGCAGCCGTCGGCGTGGCCTTGGTGCTGCGCGGCGGGGATTTTCGTTTACCGGGCCGCC TGAAGGGCGGTCGGAATTGA
Upstream 100 bases:
>100_bases TGCGCGGAACAAGCGCGGCTGATATCATCTATTCATACCGTTGACATGGCGGCCGTGCGGCCGCCATTTTTCGTTCTTTG TACAGAGGGAGTGCCGCGGG
Downstream 100 bases:
>100_bases GCAGAGGCGGAGAAACGTGTCGGAAGAGCAATTCACCAATATTTCGCTGGTGGTGTGCCTGACTGGGCTGATCATTTTCA TGGGCTTCATCATCTGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Permease DMT Superfamily; Permease; Permease Of Drug/Metabolite Transporter Superfamily; Drug/Metabolite Transporter Superfamily Permease; Integral Membrane; Integral Membrane Protein; Transporter Of DMT Superfamily; Permeases Of Drug/Metabolite Transporter
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MRASSWIPWVFVVLWSTGFTGAKLGLPYCGPFTFLAIRMALTLLCFAALLAALRPAWPTFSQARRQWVSGGMLHGGYLGC LFAAIKLGVPAGLAALIMGMQPLLTALISWRLGEKRFRALQWLGMALGLAGTALVIAGSKGVALAGGAGAAFVIAGLLLI TGGTLYQRYRGGGAHPVAGAFHQYLSALAVTGTLALLFERGERVVWSGDFIFALAWSVAMLSVLAVLLLLRMLRDGDVSR VAAYLYLVPGLTAIQAWWLFDECLSPVAMGGIVLAAVGVALVLRGGDFRLPGRLKGGRN
Sequences:
>Translated_299_residues MRASSWIPWVFVVLWSTGFTGAKLGLPYCGPFTFLAIRMALTLLCFAALLAALRPAWPTFSQARRQWVSGGMLHGGYLGC LFAAIKLGVPAGLAALIMGMQPLLTALISWRLGEKRFRALQWLGMALGLAGTALVIAGSKGVALAGGAGAAFVIAGLLLI TGGTLYQRYRGGGAHPVAGAFHQYLSALAVTGTLALLFERGERVVWSGDFIFALAWSVAMLSVLAVLLLLRMLRDGDVSR VAAYLYLVPGLTAIQAWWLFDECLSPVAMGGIVLAAVGVALVLRGGDFRLPGRLKGGRN >Mature_299_residues MRASSWIPWVFVVLWSTGFTGAKLGLPYCGPFTFLAIRMALTLLCFAALLAALRPAWPTFSQARRQWVSGGMLHGGYLGC LFAAIKLGVPAGLAALIMGMQPLLTALISWRLGEKRFRALQWLGMALGLAGTALVIAGSKGVALAGGAGAAFVIAGLLLI TGGTLYQRYRGGGAHPVAGAFHQYLSALAVTGTLALLFERGERVVWSGDFIFALAWSVAMLSVLAVLLLLRMLRDGDVSR VAAYLYLVPGLTAIQAWWLFDECLSPVAMGGIVLAAVGVALVLRGGDFRLPGRLKGGRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31606; Mature: 31606
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRASSWIPWVFVVLWSTGFTGAKLGLPYCGPFTFLAIRMALTLLCFAALLAALRPAWPTF CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH SQARRQWVSGGMLHGGYLGCLFAAIKLGVPAGLAALIMGMQPLLTALISWRLGEKRFRAL HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QWLGMALGLAGTALVIAGSKGVALAGGAGAAFVIAGLLLITGGTLYQRYRGGGAHPVAGA HHHHHHHHHHHHEEEEECCCCEEEECCCCHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHH FHQYLSALAVTGTLALLFERGERVVWSGDFIFALAWSVAMLSVLAVLLLLRMLRDGDVSR HHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VAAYLYLVPGLTAIQAWWLFDECLSPVAMGGIVLAAVGVALVLRGGDFRLPGRLKGGRN HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCC >Mature Secondary Structure MRASSWIPWVFVVLWSTGFTGAKLGLPYCGPFTFLAIRMALTLLCFAALLAALRPAWPTF CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH SQARRQWVSGGMLHGGYLGCLFAAIKLGVPAGLAALIMGMQPLLTALISWRLGEKRFRAL HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QWLGMALGLAGTALVIAGSKGVALAGGAGAAFVIAGLLLITGGTLYQRYRGGGAHPVAGA HHHHHHHHHHHHEEEEECCCCEEEECCCCHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHH FHQYLSALAVTGTLALLFERGERVVWSGDFIFALAWSVAMLSVLAVLLLLRMLRDGDVSR HHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VAAYLYLVPGLTAIQAWWLFDECLSPVAMGGIVLAAVGVALVLRGGDFRLPGRLKGGRN HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA