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The map label for this gene is pcp [H]

Identifier: 34497423

GI number: 34497423

Start: 2140607

End: 2142277

Strand: Reverse

Name: pcp [H]

Synonym: CV_1968

Alternate gene names: 34497423

Gene position: 2142277-2140607 (Counterclockwise)

Preceding gene: 34497432

Following gene: 34497422

Centisome position: 45.09

GC content: 63.73

Gene sequence:

>1671_bases
CTGTACTTAAACCGCAAGAGGAGAAACTGCATGTTTGCAAAACAGCACGCTATTGCACTGATCGTTGCCGGCGTATTCGC
CGCCGGCGCACAAGCAGCCGAAGGCTGGGTCAACACCGCCACCCAGGCTCACCCGCTGGCCGCCACCCTGACCAGCTCCG
CCGCCGCCAAGAGCACGGGCGAGCTCGCTGCCGGTCAGTCCGTGCATGTAACCGTTACGCTGAAACTGCGCAACAAGGCC
CAGCTTGACGCCCTGACCGACAGCTTGCTGGCTGGCACCAGCCACAAAACGCTGAGCCATTCCGAATTCATGGCCCAGTA
CGCTCCGACCCAGGCCCAAGTGCAAAAAGTAGTGTCCCACCTGCAAAAGAGCGGCTTCCGTAACATCAAGGTCGCTCCGA
ACCGCATGTTGATCACCGCCGAAGGCAGCGCCGCCACCGCCAAGACCGCGTTCAACGCCACCCTGCATCACTTCAACGTC
AACGGCCGCTCGGCGTTCGCCAACGTGACCGCCGCTCAAGTGCCGCAGTCGCTGGGCGATACCGTTCTGGCCGTTCACGG
CCTGCAGAACGTCCATACCTTCCACACCACCCTGCGCAAGAGCGGCGTGCAAACCCTGGCCTCGGCCAAGACCAACAGCG
TGATCGGCCACAACCCGACCGACTTCCCGCTGATCTACAACGCCAGCAGCCTGCCCCCGGCCAGCAACACCACCGTCGGC
ATCATCGCCGAAGGCGACCTGACCCAAACCCTGCAAGACCTGCAGCAGTTTGAAGACTCCGCCGGCTACAGCTATGTGCA
GACCAACGTGATCAACGCCGGCGACGCCTCGTCCGACACCGATGGCGTGGGCGAATGGAACCTGGACAGCCAGGACATCC
TCGCGGCCGCCGGCGGCGCGCTGCAGCAGATGAACTTCTACGTCGCCACCTCGATGACCAACGCCGACATCACCGCCGCC
TACAACTCGGCCGTCAGCGACGGTTCGGCCAAGGTGATCAATGTGTCCCTGGGCGAATGCGAACGTTACGCGCAAAGCGA
TGGCACCATCGCCTCCGACGATCAGATCTTCCAGACCGCGGTGGCTCAGGGCCAGACCTTCTCGGTTTCCACCGGCGACT
CCGGCTCCGCCGAATGCGGCAGCACCTCAGGCCAAAGCTACCCGGCCACTTCGCCCTACGTGATCGCCATCGGCGGCACC
ACGGTGAACACCAGCGGCACCACCAAGTACTCGTCGGAAACCGTCTGGAACGGCACCGGCGGCGGCCCGAGCGTCGTCGA
AGCGGCTCCGTCTTGGCAAACCAAGGCCGGCGTGCTGACCACGTCCAAGACCAAGCGCGGCGTGCCGGACGTGTCGTTCG
ACGCTGACCCGAACAGCGGCGCGCTGGTGATCGTGAACGGCAGCAATCAGCAAATCGGCGGCACCAGCCTGGCTGCTCCG
CTGTTCACCGGCTTCTGGGCGCGCATCCAGTCCGCTCACGGCAACAGCCTGGTATCGCCGAACCCGGCCATCTATCAGTA
CTTCAAAGCCAACCCCTCGCTGTACCACGACGTGACCAGCGGCAACAACGGCGGTTACAAAGCCACCGCCAGCTGGGACT
ACGCCACCGGCTGGGGCAGCCTGAACGTCGCCAACCTGAACACCTTCATCAACAGCCACTCCGGCTTCTAA

Upstream 100 bases:

>100_bases
ACATGCCTCGAATTATCCGGAGGCAACCATAGGCCAAGGGCGCGAACACAATTCGCAATACAAGCCCTGCCACTATCAGG
AAAAGACATATCGTTTTTTC

Downstream 100 bases:

>100_bases
GCGCTGAAGGTATCAAGCCGTAACGTGAAAAGCCCCGGGCAACCGGGGCTTTTCAGCTTTTCCCTCACAAAAGCGCATCT
GCGCACTGCCTTTTCAATTG

Product: protease

Products: NA

Alternate protein names: Pepstatin-insensitive carboxyl proteinase; Pseudomonapepsin [H]

Number of amino acids: Translated: 556; Mature: 556

Protein sequence:

>556_residues
MYLNRKRRNCMFAKQHAIALIVAGVFAAGAQAAEGWVNTATQAHPLAATLTSSAAAKSTGELAAGQSVHVTVTLKLRNKA
QLDALTDSLLAGTSHKTLSHSEFMAQYAPTQAQVQKVVSHLQKSGFRNIKVAPNRMLITAEGSAATAKTAFNATLHHFNV
NGRSAFANVTAAQVPQSLGDTVLAVHGLQNVHTFHTTLRKSGVQTLASAKTNSVIGHNPTDFPLIYNASSLPPASNTTVG
IIAEGDLTQTLQDLQQFEDSAGYSYVQTNVINAGDASSDTDGVGEWNLDSQDILAAAGGALQQMNFYVATSMTNADITAA
YNSAVSDGSAKVINVSLGECERYAQSDGTIASDDQIFQTAVAQGQTFSVSTGDSGSAECGSTSGQSYPATSPYVIAIGGT
TVNTSGTTKYSSETVWNGTGGGPSVVEAAPSWQTKAGVLTTSKTKRGVPDVSFDADPNSGALVIVNGSNQQIGGTSLAAP
LFTGFWARIQSAHGNSLVSPNPAIYQYFKANPSLYHDVTSGNNGGYKATASWDYATGWGSLNVANLNTFINSHSGF

Sequences:

>Translated_556_residues
MYLNRKRRNCMFAKQHAIALIVAGVFAAGAQAAEGWVNTATQAHPLAATLTSSAAAKSTGELAAGQSVHVTVTLKLRNKA
QLDALTDSLLAGTSHKTLSHSEFMAQYAPTQAQVQKVVSHLQKSGFRNIKVAPNRMLITAEGSAATAKTAFNATLHHFNV
NGRSAFANVTAAQVPQSLGDTVLAVHGLQNVHTFHTTLRKSGVQTLASAKTNSVIGHNPTDFPLIYNASSLPPASNTTVG
IIAEGDLTQTLQDLQQFEDSAGYSYVQTNVINAGDASSDTDGVGEWNLDSQDILAAAGGALQQMNFYVATSMTNADITAA
YNSAVSDGSAKVINVSLGECERYAQSDGTIASDDQIFQTAVAQGQTFSVSTGDSGSAECGSTSGQSYPATSPYVIAIGGT
TVNTSGTTKYSSETVWNGTGGGPSVVEAAPSWQTKAGVLTTSKTKRGVPDVSFDADPNSGALVIVNGSNQQIGGTSLAAP
LFTGFWARIQSAHGNSLVSPNPAIYQYFKANPSLYHDVTSGNNGGYKATASWDYATGWGSLNVANLNTFINSHSGF
>Mature_556_residues
MYLNRKRRNCMFAKQHAIALIVAGVFAAGAQAAEGWVNTATQAHPLAATLTSSAAAKSTGELAAGQSVHVTVTLKLRNKA
QLDALTDSLLAGTSHKTLSHSEFMAQYAPTQAQVQKVVSHLQKSGFRNIKVAPNRMLITAEGSAATAKTAFNATLHHFNV
NGRSAFANVTAAQVPQSLGDTVLAVHGLQNVHTFHTTLRKSGVQTLASAKTNSVIGHNPTDFPLIYNASSLPPASNTTVG
IIAEGDLTQTLQDLQQFEDSAGYSYVQTNVINAGDASSDTDGVGEWNLDSQDILAAAGGALQQMNFYVATSMTNADITAA
YNSAVSDGSAKVINVSLGECERYAQSDGTIASDDQIFQTAVAQGQTFSVSTGDSGSAECGSTSGQSYPATSPYVIAIGGT
TVNTSGTTKYSSETVWNGTGGGPSVVEAAPSWQTKAGVLTTSKTKRGVPDVSFDADPNSGALVIVNGSNQQIGGTSLAAP
LFTGFWARIQSAHGNSLVSPNPAIYQYFKANPSLYHDVTSGNNGGYKATASWDYATGWGSLNVANLNTFINSHSGF

Specific function: Unknown

COG id: COG4934

COG function: function code O; Predicted protease

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S53 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015366
- InterPro:   IPR000209
- InterPro:   IPR022398
- InterPro:   IPR009020 [H]

Pfam domain/function: PF00082 Peptidase_S8; PF09286 Pro-kuma_activ [H]

EC number: =3.4.21.100 [H]

Molecular weight: Translated: 57810; Mature: 57810

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00138 SUBTILASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLNRKRRNCMFAKQHAIALIVAGVFAAGAQAAEGWVNTATQAHPLAATLTSSAAAKSTG
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHCCHHHCCCC
ELAAGQSVHVTVTLKLRNKAQLDALTDSLLAGTSHKTLSHSEFMAQYAPTQAQVQKVVSH
CCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
LQKSGFRNIKVAPNRMLITAEGSAATAKTAFNATLHHFNVNGRSAFANVTAAQVPQSLGD
HHHCCCCEEEECCCEEEEEECCCCCCHHHHHEEEEEEEECCCCHHHHCCHHHHHHHHHCC
TVLAVHGLQNVHTFHTTLRKSGVQTLASAKTNSVIGHNPTDFPLIYNASSLPPASNTTVG
CEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCEEE
IIAEGDLTQTLQDLQQFEDSAGYSYVQTNVINAGDASSDTDGVGEWNLDSQDILAAAGGA
EEECCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCH
LQQMNFYVATSMTNADITAAYNSAVSDGSAKVINVSLGECERYAQSDGTIASDDQIFQTA
HHHCEEEEEEECCCCCEEEECCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCHHHHHHH
VAQGQTFSVSTGDSGSAECGSTSGQSYPATSPYVIAIGGTTVNTSGTTKYSSETVWNGTG
HHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCEECCCEEECCCC
GGPSVVEAAPSWQTKAGVLTTSKTKRGVPDVSFDADPNSGALVIVNGSNQQIGGTSLAAP
CCCHHEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHH
LFTGFWARIQSAHGNSLVSPNPAIYQYFKANPSLYHDVTSGNNGGYKATASWDYATGWGS
HHHHHHHHHHHCCCCCCCCCCHHHHHEECCCCCEEEECCCCCCCCEEEEECCCCCCCCCC
LNVANLNTFINSHSGF
EEEEEHHHHHHCCCCC
>Mature Secondary Structure
MYLNRKRRNCMFAKQHAIALIVAGVFAAGAQAAEGWVNTATQAHPLAATLTSSAAAKSTG
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHCCHHHCCCC
ELAAGQSVHVTVTLKLRNKAQLDALTDSLLAGTSHKTLSHSEFMAQYAPTQAQVQKVVSH
CCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
LQKSGFRNIKVAPNRMLITAEGSAATAKTAFNATLHHFNVNGRSAFANVTAAQVPQSLGD
HHHCCCCEEEECCCEEEEEECCCCCCHHHHHEEEEEEEECCCCHHHHCCHHHHHHHHHCC
TVLAVHGLQNVHTFHTTLRKSGVQTLASAKTNSVIGHNPTDFPLIYNASSLPPASNTTVG
CEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCEEE
IIAEGDLTQTLQDLQQFEDSAGYSYVQTNVINAGDASSDTDGVGEWNLDSQDILAAAGGA
EEECCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCH
LQQMNFYVATSMTNADITAAYNSAVSDGSAKVINVSLGECERYAQSDGTIASDDQIFQTA
HHHCEEEEEEECCCCCEEEECCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCHHHHHHH
VAQGQTFSVSTGDSGSAECGSTSGQSYPATSPYVIAIGGTTVNTSGTTKYSSETVWNGTG
HHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCEECCCEEECCCC
GGPSVVEAAPSWQTKAGVLTTSKTKRGVPDVSFDADPNSGALVIVNGSNQQIGGTSLAAP
CCCHHEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHH
LFTGFWARIQSAHGNSLVSPNPAIYQYFKANPSLYHDVTSGNNGGYKATASWDYATGWGS
HHHHHHHHHHHCCCCCCCCCCHHHHHEECCCCCEEEECCCCCCCCEEEEECCCCCCCCCC
LNVANLNTFINSHSGF
EEEEEHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7929375; 8576087; 10488127; 11747435; 11323721 [H]