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The map label for this gene is pcp [H]

Identifier: 34497420

GI number: 34497420

Start: 2137863

End: 2139542

Strand: Reverse

Name: pcp [H]

Synonym: CV_1965

Alternate gene names: 34497420

Gene position: 2139542-2137863 (Counterclockwise)

Preceding gene: 34497422

Following gene: 34497419

Centisome position: 45.03

GC content: 65.83

Gene sequence:

>1680_bases
ATGCAGACCCATAAAACGACCTTGTTGATGCTCGGTTGCCTGTTCAACATCCCGGTCCAGGCCGCCGGTTGGATAAGCAC
AGGCACCCAGGCGCATCCAACCCAGCAATTGGCTCCAAACGCGCGGGATGCCGGAGAGATCGCCGGCGGCGAGGTCGTAC
GCATCGCGGTCAGCCTGGCGATGCGCAATCAGGCTTCGCTGAACGCGCTCACCGACAACATCCTGGCCGGGCAGGGACAG
CCCATCAGCGACGCGCAGTTCATGAGCCAATACGCGCCCACCGCGGCCCAAGCGCAACAAGTGGTGAGCCATCTACGGCA
AAGCGGCTTCCGCAATATCGCCGTCTCCCCCAATAACCTGCTGGTCACGGCGGAAGGCAGCGCCGCCACCGTTTACGGCG
CCTTCCAGACCCGGCTGCACCGATACGATGTGGGCGGCAGACAAGCGGTCGCCAACATCCAGAACGCCCAGGTGCCGGCC
AGCCTGGCCGGGATCGTGCTGGCGGTGCACGGTCTGCAGAGCGTCCATCAGTTCCATGCGGCCTTCCACGCCCAAAGCGT
GAGCAAGGCCGCCTCGGGCATCGTCGCCCACAAGCCGACGGACTTCGCCTCGATCTACAACGCCGCCAGCCTTCCCGCCG
CCAAAAACGGCGTGGCCGGCATCATCGCCGAAGGCAATCTGAGCCAGACGGTGGCCGATCTGAACAGTTACGCCAAAAGC
GCCGGCTTCGCCGCGCCCAGCGTCGCCATCGTCAACGCCGGCACGCCCAGCGCCGACACCTCCGGCATCATGGAGTGGAA
TCTGGACAGCCAGACCATGCTGGCCGCCAGCGGCGGCGCGTTGAAGCAGCTGCAGTTCTACGTCGCGCCGTCGATGAACA
ACGCCGACATCGCCGCGGCCATCAATGCGGCGGTGGCAGCCAACAGCGCCAAGGTGATCAATGTGTCGCTGGGCGAATGC
GAACTGGGCGCGAAAGCGTCCGGCATGACCGCCAGCGTCGACCAGATGCTGCAGGCCGCCGTCGCCCATGGCCAGACCTT
TTCCGTCTCCAGCGGCGATTCCGGCTCCTACGAGTGCGGCGGCAGTAGCGCCTATCAAAGCTATCCGGCGGTTTCACCCT
ACGTGATCGCGGTGGGCGGCACCACGCTGACCACCGGCGGCACGACCGCCTACGGCAGCGAAAAGACCTGGAGCGGCAGC
GGCGGCGGTCCCAGCGCCACGGAAGCCGCCCCATCCTGGCAAACCGCCTCCGGCGTGCTGACCACAGCCAAGACCAAGCG
CGGCGTGCCGGACATCGCCTTCGACGCCGACCCCGGCAGCGGCGAGCTGGTGCTGGTATCCGGCAGCACTTACCAGGTAG
GCGGCACCAGCCTGGCCGCGCCGCTGTTCAGCGGCTTCTGGATCCGCATCCAATCCGCCAATGGCAACAAGCTGACTTCG
CCGGCCAATGCCATCTACAAATACTTCAAGGCCAATCCTTCGCTGTACCGCGACGTGGCCAGCGGCAGCAACGGCGCGTT
CAAAGCCACTGCGGGATGGGACTACACCACAGGCTGGGGCAGCTTGAACATCCGCCAATCTCAACGCCTTCATCGCCAAG
ACCGCCGGTTTCTGACGGAAGCCGCCCGCAAACGCCCCGCGTGTACGCGGGGCGTTTGCTTTGGCCGGGCCGCCGCTTAG

Upstream 100 bases:

>100_bases
ATTAAAGAGTGAATGCTTTACAGACTAGCGAATGGACACTATCAAGAAAACATGCGCGGCTTCATGCTCGGGCCCCGCGC
GGTTTTCCAGGAGAAGCGGC

Downstream 100 bases:

>100_bases
AATGACGGCATCGCCCTACTTTCTCCGCGCCATGAAACCCGACCTCGCCATCAGCCTGCTGCACCTGTGCCGCCACGCCA
CGCTGGCCACCCAGTCTCGC

Product: protease

Products: NA

Alternate protein names: Pepstatin-insensitive carboxyl proteinase; Pseudomonapepsin [H]

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MQTHKTTLLMLGCLFNIPVQAAGWISTGTQAHPTQQLAPNARDAGEIAGGEVVRIAVSLAMRNQASLNALTDNILAGQGQ
PISDAQFMSQYAPTAAQAQQVVSHLRQSGFRNIAVSPNNLLVTAEGSAATVYGAFQTRLHRYDVGGRQAVANIQNAQVPA
SLAGIVLAVHGLQSVHQFHAAFHAQSVSKAASGIVAHKPTDFASIYNAASLPAAKNGVAGIIAEGNLSQTVADLNSYAKS
AGFAAPSVAIVNAGTPSADTSGIMEWNLDSQTMLAASGGALKQLQFYVAPSMNNADIAAAINAAVAANSAKVINVSLGEC
ELGAKASGMTASVDQMLQAAVAHGQTFSVSSGDSGSYECGGSSAYQSYPAVSPYVIAVGGTTLTTGGTTAYGSEKTWSGS
GGGPSATEAAPSWQTASGVLTTAKTKRGVPDIAFDADPGSGELVLVSGSTYQVGGTSLAAPLFSGFWIRIQSANGNKLTS
PANAIYKYFKANPSLYRDVASGSNGAFKATAGWDYTTGWGSLNIRQSQRLHRQDRRFLTEAARKRPACTRGVCFGRAAA

Sequences:

>Translated_559_residues
MQTHKTTLLMLGCLFNIPVQAAGWISTGTQAHPTQQLAPNARDAGEIAGGEVVRIAVSLAMRNQASLNALTDNILAGQGQ
PISDAQFMSQYAPTAAQAQQVVSHLRQSGFRNIAVSPNNLLVTAEGSAATVYGAFQTRLHRYDVGGRQAVANIQNAQVPA
SLAGIVLAVHGLQSVHQFHAAFHAQSVSKAASGIVAHKPTDFASIYNAASLPAAKNGVAGIIAEGNLSQTVADLNSYAKS
AGFAAPSVAIVNAGTPSADTSGIMEWNLDSQTMLAASGGALKQLQFYVAPSMNNADIAAAINAAVAANSAKVINVSLGEC
ELGAKASGMTASVDQMLQAAVAHGQTFSVSSGDSGSYECGGSSAYQSYPAVSPYVIAVGGTTLTTGGTTAYGSEKTWSGS
GGGPSATEAAPSWQTASGVLTTAKTKRGVPDIAFDADPGSGELVLVSGSTYQVGGTSLAAPLFSGFWIRIQSANGNKLTS
PANAIYKYFKANPSLYRDVASGSNGAFKATAGWDYTTGWGSLNIRQSQRLHRQDRRFLTEAARKRPACTRGVCFGRAAA
>Mature_559_residues
MQTHKTTLLMLGCLFNIPVQAAGWISTGTQAHPTQQLAPNARDAGEIAGGEVVRIAVSLAMRNQASLNALTDNILAGQGQ
PISDAQFMSQYAPTAAQAQQVVSHLRQSGFRNIAVSPNNLLVTAEGSAATVYGAFQTRLHRYDVGGRQAVANIQNAQVPA
SLAGIVLAVHGLQSVHQFHAAFHAQSVSKAASGIVAHKPTDFASIYNAASLPAAKNGVAGIIAEGNLSQTVADLNSYAKS
AGFAAPSVAIVNAGTPSADTSGIMEWNLDSQTMLAASGGALKQLQFYVAPSMNNADIAAAINAAVAANSAKVINVSLGEC
ELGAKASGMTASVDQMLQAAVAHGQTFSVSSGDSGSYECGGSSAYQSYPAVSPYVIAVGGTTLTTGGTTAYGSEKTWSGS
GGGPSATEAAPSWQTASGVLTTAKTKRGVPDIAFDADPGSGELVLVSGSTYQVGGTSLAAPLFSGFWIRIQSANGNKLTS
PANAIYKYFKANPSLYRDVASGSNGAFKATAGWDYTTGWGSLNIRQSQRLHRQDRRFLTEAARKRPACTRGVCFGRAAA

Specific function: Unknown

COG id: COG4934

COG function: function code O; Predicted protease

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S53 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015366
- InterPro:   IPR000209
- InterPro:   IPR022398
- InterPro:   IPR009020 [H]

Pfam domain/function: PF00082 Peptidase_S8; PF09286 Pro-kuma_activ [H]

EC number: =3.4.21.100 [H]

Molecular weight: Translated: 57415; Mature: 57415

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00138 SUBTILASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTHKTTLLMLGCLFNIPVQAAGWISTGTQAHPTQQLAPNARDAGEIAGGEVVRIAVSLA
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEHHHH
MRNQASLNALTDNILAGQGQPISDAQFMSQYAPTAAQAQQVVSHLRQSGFRNIAVSPNNL
HCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCE
LVTAEGSAATVYGAFQTRLHRYDVGGRQAVANIQNAQVPASLAGIVLAVHGLQSVHQFHA
EEEECCCCEEEEHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AFHAQSVSKAASGIVAHKPTDFASIYNAASLPAAKNGVAGIIAEGNLSQTVADLNSYAKS
HHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
AGFAAPSVAIVNAGTPSADTSGIMEWNLDSQTMLAASGGALKQLQFYVAPSMNNADIAAA
CCCCCCCEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHH
INAAVAANSAKVINVSLGECELGAKASGMTASVDQMLQAAVAHGQTFSVSSGDSGSYECG
HHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC
GSSAYQSYPAVSPYVIAVGGTTLTTGGTTAYGSEKTWSGSGGGPSATEAAPSWQTASGVL
CCCHHHCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
TTAKTKRGVPDIAFDADPGSGELVLVSGSTYQVGGTSLAAPLFSGFWIRIQSANGNKLTS
EEHHHHCCCCCEEEECCCCCCCEEEEECCEEEECCCHHHHHHHCCEEEEEECCCCCCCCC
PANAIYKYFKANPSLYRDVASGSNGAFKATAGWDYTTGWGSLNIRQSQRLHRQDRRFLTE
HHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCEECCCCCEEEHHHHHHHHHHHHHHHH
AARKRPACTRGVCFGRAAA
HHHCCCCCHHCCCCCCCCC
>Mature Secondary Structure
MQTHKTTLLMLGCLFNIPVQAAGWISTGTQAHPTQQLAPNARDAGEIAGGEVVRIAVSLA
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEHHHH
MRNQASLNALTDNILAGQGQPISDAQFMSQYAPTAAQAQQVVSHLRQSGFRNIAVSPNNL
HCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCE
LVTAEGSAATVYGAFQTRLHRYDVGGRQAVANIQNAQVPASLAGIVLAVHGLQSVHQFHA
EEEECCCCEEEEHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AFHAQSVSKAASGIVAHKPTDFASIYNAASLPAAKNGVAGIIAEGNLSQTVADLNSYAKS
HHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
AGFAAPSVAIVNAGTPSADTSGIMEWNLDSQTMLAASGGALKQLQFYVAPSMNNADIAAA
CCCCCCCEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHH
INAAVAANSAKVINVSLGECELGAKASGMTASVDQMLQAAVAHGQTFSVSSGDSGSYECG
HHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC
GSSAYQSYPAVSPYVIAVGGTTLTTGGTTAYGSEKTWSGSGGGPSATEAAPSWQTASGVL
CCCHHHCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
TTAKTKRGVPDIAFDADPGSGELVLVSGSTYQVGGTSLAAPLFSGFWIRIQSANGNKLTS
EEHHHHCCCCCEEEECCCCCCCEEEEECCEEEECCCHHHHHHHCCEEEEEECCCCCCCCC
PANAIYKYFKANPSLYRDVASGSNGAFKATAGWDYTTGWGSLNIRQSQRLHRQDRRFLTE
HHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCEECCCCCEEEHHHHHHHHHHHHHHHH
AARKRPACTRGVCFGRAAA
HHHCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7929375; 8576087; 10488127; 11747435; 11323721 [H]